Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMBS

Gene Name Gene ID Reads Annotation
HMBS ENSGALG00000042939 13360 hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]











Genes with expression patterns similar to HMBS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMBS ENSGALG00000042939 13360 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
2. SDC1 ENSGALG00000016480 13737 1 - - - - - - 1.000 - - - syndecan 1 [Source:HGNC Symbol;Acc:HGNC:10658]
3. HSPA5 ENSGALG00000001000 40342 0.96 - - - - - - 0.960 - - - heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
4. DNAJC9 ENSGALG00000002701 19249 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
5. PRRC2C 3925 0.92 - - - - - - - 0.920 - - proline rich coiled-coil 2C, transcript variant X17
6. BSG ENSGALG00000001328 37947 0.918 - - - - - - - 0.918 - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
7. RNF220 ENSGALG00000010109 3114 0.917 - - - - - - - 0.917 - - ring finger protein 220 [Source:NCBI gene;Acc:424580]
8. EZH2 ENSGALG00000043399 15881 0.916 - - - - - - - 0.916 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
9. UQCR10 ENSGALG00000008066 52968 0.888 - - - - - - - 0.888 - - ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
10. TCF3 ENSGALG00000001093 15624 0.86 - - - - - - - 0.860 - - transcription factor 3 [Source:NCBI gene;Acc:395146]
11. ANP32E ENSGALG00000039891 35925 0.858 - - - - - - 0.858 - - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
12. TFDP1 ENSGALG00000016823 17019 0.857 - - - - - - - 0.857 - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
13. WDR33 ENSGALG00000002043 6340 0.851 - - - - - - - 0.851 - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
14. DDT ENSGALG00000006350 16117 0.846 - - - - - - - 0.846 - - D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
15. TM9SF2L ENSGALG00000006487 5566 0.829 - - - - - - - 0.829 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
16. MRPL32 ENSGALG00000037258 6861 0.827 - - - - - - - 0.827 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
17. SNRPA1 ENSGALG00000007170 17764 0.826 - - - - - - - 0.826 - - small nuclear ribonucleoprotein polypeptide A' [Source:NCBI gene;Acc:415523]
18. PREP ENSGALG00000015405 17050 0.826 - - - - - - - 0.826 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
19. C17H9ORF16 C17H9ORF16 7908 0.821 - - - - - - - 0.821 - -
20. MTFR2 ENSGALG00000019967 4436 0.816 - - - - - - - 0.816 - - mitochondrial fission regulator 2, transcript variant X1
21. GNL2 ENSGALG00000001973 10148 0.815 - - - - - - - 0.815 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
22. LRRC59 ENSGALG00000007673 2081 0.815 - - - - - - - 0.815 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
23. ZCCHC10 ENSGALG00000036666 5148 0.812 - - - - - - - 0.812 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
24. IVD ENSGALG00000040267 5820 0.812 - - - - - - - 0.812 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
25. BEND5 ENSGALG00000010505 3298 0.811 - - - - - - - 0.811 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
26. STX2 ENSGALG00000002536 10438 0.811 - - - - - - - 0.811 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
27. TEX10 ENSGALG00000013438 3121 0.81 - - - - - - - 0.810 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
28. TMEM60 ENSGALG00000008330 6303 0.81 - - - - - - - 0.810 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
29. COPS8 ENSGALG00000033385 10166 0.809 - - - - - - - 0.809 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
30. ATP11B ENSGALG00000008839 3455 0.808 - - - - - - - 0.808 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
31. EIF3I ENSGALG00000003337 28832 0.807 - - - - - - - 0.807 - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
32. CDKAL1 ENSGALG00000012677 4733 0.807 - - - - - - - 0.807 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
33. SIRT6 ENSGALG00000001245 3716 0.806 - - - - - - - 0.806 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
34. BLCAP ENSGALG00000027126 12200 0.806 - - - - - - - 0.806 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
35. NEO1 ENSGALG00000001774 10165 0.805 - - - - - - - 0.805 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
36. CCDC58 ENSGALG00000014413 9022 0.805 - - - - - - - 0.805 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
37. NKIRAS2 ENSGALG00000028971 3414 0.805 - - - - - - - 0.805 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
38. FSBP 3152 0.805 - - - - - - - 0.805 - - fibrinogen silencer binding protein
39. DIMT1 ENSGALG00000020569 5150 0.805 - - - - - - - 0.805 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
40. PRDM6 ENSGALG00000005351 2078 0.805 - - - - - - - 0.805 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
41. RAD52 ENSGALG00000039171 6989 0.804 - - - - - - - 0.804 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
42. MIEN1 ENSGALG00000026328 3396 0.803 - - - - - - - 0.803 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
43. SFXN1 ENSGALG00000033956 2713 0.802 - - - - - - - 0.802 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
44. MYO9A ENSGALG00000033618 4505 0.802 - - - - - - - 0.802 - - myosin IXA, transcript variant X10
45. TMEM26 ENSGALG00000025862 2222 0.802 - - - - - - - 0.802 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
46. TNNI1 ENSGALG00000000313 4069 0.801 - - - - - - - 0.801 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
47. PIGB ENSGALG00000037734 2193 0.8 - - - - - - - 0.800 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
48. SULF1 ENSGALG00000039553 5115 0.8 - - - - - - - 0.800 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
49. RAB11A ENSGALG00000007615 9154 0.8 - - - - - - - 0.800 - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
50. RAB20 ENSGALG00000016844 3250 0.8 - - - - - - - 0.800 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
51. KIF1A ENSGALG00000006221 1989 0.8 - - - - - - - 0.800 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
52. ENSGALG00000002852 ENSGALG00000002852 2687 0.8 - - - - - - - 0.800 - -
53. ADAMTS6 ENSGALG00000014751 1293 0.8 - - - - - - - 0.800 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
54. KCNK2 ENSGALG00000009687 1552 0.799 - - - - - - - 0.799 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
55. MCFD2 ENSGALG00000010017 8905 0.799 - - - - - - - 0.799 - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
56. CCDC15 1759 0.798 - - - - - - - 0.798 - - coiled-coil domain containing 15
57. DEPDC1B ENSGALG00000014729 5334 0.798 - - - - - - - 0.798 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
58. MAGT1 ENSGALG00000007861 9105 0.797 - - - - - - - 0.797 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
59. SYNM ENSGALG00000007048 705 0.797 - - - - - - - 0.797 - - synemin [Source:NCBI gene;Acc:395599]
60. SNORA72 SNORA72 27695 0.797 - - - - - - - 0.797 - -
61. NDUFB4 ENSGALG00000027688 8951 0.797 - - - - - - - 0.797 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
62. EFR3B ENSGALG00000016605 234 0.797 - - - - - - - 0.797 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
63. GATC ENSGALG00000007195 8610 0.797 - - - - - - - 0.797 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
64. ARHGEF18 ENSGALG00000003572 224 0.796 - - - - - - - 0.796 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
65. ENSGALG00000006278 ENSGALG00000006278 202 0.796 - - - - - - - 0.796 - -
66. FAXDC2 ENSGALG00000003972 172 0.796 - - - - - - - 0.796 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
67. UQCRC1 ENSGALG00000005789 23201 0.795 - - - - - - - - 0.795 - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
68. RAC2 ENSGALG00000012456 987 0.795 - - - - - - - 0.795 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
69. HPS4 ENSGALG00000005595 2217 0.794 - - - - - - - 0.794 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
70. CNPY3 ENSGALG00000028471 1413 0.794 - - - - - - - 0.794 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
71. DCK ENSGALG00000028501 8675 0.794 - - - - - - - 0.794 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
72. CCDC104 CCDC104 6584 0.793 - - - - - - - 0.793 - -
73. TTC37 ENSGALG00000014670 5715 0.792 - - - - - - - 0.792 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
74. TMEM200C ENSGALG00000030210 1434 0.791 - - - - - - - 0.791 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
75. AVENAII AVENAII 4552 0.789 - - - - - - - 0.789 - -
76. DAB2 ENSGALG00000003803 6143 0.785 - - - - - - - 0.785 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
77. ACVR2B ENSGALG00000006158 8692 0.784 - - - - - - - 0.784 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
78. YIPF1 5945 0.784 - - - - - - - 0.784 - - Yip1 domain family member 1, transcript variant 4
79. GRPEL1 ENSGALG00000015549 11246 0.78 - - - - - - - 0.780 - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
80. TP53BP2 ENSGALG00000042816 12368 0.779 - - - - - - - 0.779 - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
81. C C 7669 0.776 - - - - - - - 0.776 - -
82. SPR ENSGALG00000000067 3456 0.775 - - - - - - - 0.775 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
83. AP5Z1 ENSGALG00000040528 4302 0.768 - - - - - - - 0.768 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
84. GBX-1 GBX-1 1430 0.767 - - - - - - 0.767 - - -
85. ECE-1 ECE-1 3057 0.766 - - - - - - 0.766 - - -
86. UTP14A ENSGALG00000024039 8532 0.766 - - - - - - 0.766 - - - UTP14A small subunit processome component
87. PRRC2B 1997 0.766 - - - - - - 0.766 - - - proline rich coiled-coil 2B, transcript variant X12
88. WDYHV1 ENSGALG00000030059 2961 0.766 - - - - - - 0.766 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
89. PIK3C2B ENSGALG00000037043 4522 0.766 - - - - - - 0.766 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
90. RAP1GDS1 ENSGALG00000012222 10078 0.766 - - - - - - 0.766 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
91. TUSC3 ENSGALG00000013674 2848 0.766 - - - - - - 0.766 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
92. KIAA0922 4430 0.765 - - - - - - 0.765 - - - KIAA0922, transcript variant X4
93. THBS4 ENSGALG00000014804 4228 0.765 - - - - - - 0.765 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
94. PDCD10 ENSGALG00000009477 7061 0.764 - - - - - - - 0.764 - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
95. EVPL ENSGALG00000002108 591 0.764 - - - - - - - 0.764 - - envoplakin
96. TDP2 ENSGALG00000013637 6595 0.763 - - - - - - 0.763 - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
97. MAPKAPK2 ENSGALG00000000883 6174 0.763 - - - - - - 0.763 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
98. ENSGALG00000001861 ENSGALG00000001861 10150 0.763 - - - - - - 0.763 - - -
99. C1H21ORF33 ENSGALG00000019171 8910 0.763 - - - - - - 0.763 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
100. PRRX1 ENSGALG00000003324 4859 0.763 - - - - - - 0.763 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]

There are 48 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA