Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMBOX1

Gene Name Gene ID Reads Annotation
HMBOX1 ENSGALG00000016633 247 homeobox containing 1 [Source:NCBI gene;Acc:422024]











Genes with expression patterns similar to HMBOX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMBOX1 ENSGALG00000016633 247 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 homeobox containing 1 [Source:NCBI gene;Acc:422024]
2. ENSGALG00000023485 ENSGALG00000023485 46 1.787 - - - 0.869 - 0.918 - - - -
3. MKL2 186 1.612 - - - - - 0.830 - 0.782 - - MKL1/myocardin like 2, transcript variant X4
4. EIF4ENIF1 ENSGALG00000006898 24 0.922 - - - - - 0.922 - - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
5. ALDH6A1 ENSGALG00000010211 29 0.918 - - - - - 0.918 - - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
6. ATP6V1AL ENSGALG00000000048 21 0.918 - - - - - 0.918 - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
7. PPM1L ENSGALG00000009537 5 0.918 - - - - - 0.918 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
8. FAM208B 24 0.918 - - - - - 0.918 - - - - family with sequence similarity 208 member B, transcript variant X3
9. PPIP5K1 ENSGALG00000008385 7 0.918 - - - - - 0.918 - - - - diphosphoinositol pentakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:29023]
10. LY96 ENSGALG00000032701 18 0.918 - - - - - 0.918 - - - - lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
11. AGO1 ENSGALG00000002249 125 0.918 - - - - - 0.918 - - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
12. DPP10 ENSGALG00000012156 20 0.918 - - - - - 0.918 - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
13. PVALB1 PVALB1 267 0.918 - - - - - 0.918 - - - -
14. KIAA1919 KIAA1919 58 0.917 - - - - - 0.917 - - - -
15. CASR ENSGALG00000038405 53 0.916 - - - - - 0.916 - - - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
16. DNAH12 ENSGALG00000005601 80 0.915 - - - - - 0.915 - - - - dynein, axonemal, heavy chain 12, transcript variant X6
17. EVA1CL ENSGALG00000004734 168 0.91 - - - - - 0.910 - - - - protein eva-1 homolog C-like, transcript variant X2
18. C16orf72 ENSGALG00000007291 228 0.906 - - - - - 0.906 - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
19. TJP3 ENSGALG00000000748 45 0.906 - - - 0.906 - - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
20. NTS ENSGALG00000027192 669 0.905 - - - 0.905 - - - - - - neurotensin [Source:NCBI gene;Acc:417883]
21. LRRC58 ENSGALG00000033186 15 0.903 - - - - - 0.903 - - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
22. PNLDC1 ENSGALG00000011624 150 0.896 - - - - - 0.896 - - - - PARN like, ribonuclease domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21185]
23. PNMT ENSGALG00000027281 14 0.894 - - - 0.894 - - - - - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
24. CRLF2 ENSGALG00000045814 7 0.894 - - - 0.894 - - - - - - cytokine receptor-like factor 2
25. DDAH1 ENSGALG00000008663 8 0.894 - - - 0.894 - - - - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
26. SLC18A2 ENSGALG00000009289 11 0.894 - - - 0.894 - - - - - - solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
27. MCF2L2 ENSGALG00000008744 8 0.894 - - - - - 0.894 - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
28. MTHFD2L ENSGALG00000010855 14 0.893 - - - 0.893 - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
29. GINS3 ENSGALG00000031209 32 0.891 - - - - - 0.891 - - - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
30. ENSGALG00000004050 ENSGALG00000004050 9 0.891 - - - 0.891 - - - - - -
31. MALL ENSGALG00000023882 241 0.89 - - - 0.890 - - - - - - mal, T-cell differentiation protein like [Source:NCBI gene;Acc:421222]
32. PCDH12 ENSGALG00000002544 36 0.889 - - - - - 0.889 - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
33. TMEM196 ENSGALG00000010865 239 0.889 - - - 0.889 - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
34. ENSGALG00000018733 ENSGALG00000018733 175 0.889 - - - 0.889 - - - - - -
35. CLDN12 ENSGALG00000009038 16 0.888 - - - 0.888 - - - - - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
36. C3AR1 ENSGALG00000013218 32 0.887 - - - - - 0.887 - - - - complement C3a receptor 1 [Source:NCBI gene;Acc:418198]
37. uc_6 uc_6 14 0.885 - - - - - 0.885 - - - -
38. KCNE3 ENSGALG00000022696 561 0.884 - - - - - 0.884 - - - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
39. SNORA19 SNORA19 70 0.884 - - - 0.884 - - - - - -
40. WFDC2 ENSGALG00000031164 37 0.883 - - - 0.883 - - - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
41. MANBA ENSGALG00000012308 84 0.882 - - - 0.882 - - - - - - mannosidase beta [Source:HGNC Symbol;Acc:HGNC:6831]
42. XYLB ENSGALG00000006173 23 0.882 - - - 0.882 - - - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
43. CL2 ENSGALG00000011455 87 0.881 - - - 0.881 - - - - - - liver ribonuclease A [Source:NCBI gene;Acc:422633]
44. LRRK1 LRRK1 35 0.88 - - - 0.880 - - - - - -
45. ETNPPL ENSGALG00000034741 39 0.879 - - - 0.879 - - - - - - ethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]
46. TMEM161B ENSGALG00000010896 36 0.879 - - - 0.879 - - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
47. TMEFF2 ENSGALG00000007759 93 0.879 - - - 0.879 - - - - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
48. ANKRD12 ENSGALG00000008399 1724 0.875 - - - - - 0.875 - - - - ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
49. RRAD ENSGALG00000005140 183 0.874 - - - 0.874 - - - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
50. KIAA1239 KIAA1239 263 0.874 - - - - - 0.874 - - - -
51. RGS12 ENSGALG00000015626 280 0.873 - - - - - 0.873 - - - - regulator of G protein signaling 12 [Source:HGNC Symbol;Acc:HGNC:9994]
52. ZFPM1 ENSGALG00000006099 97 0.872 - - - - - 0.872 - - - - zinc finger protein, FOG family member 1 [Source:HGNC Symbol;Acc:HGNC:19762]
53. UGT1A1 ENSGALG00000004196 30 0.869 - - - 0.869 - - - - - - UDP glucuronosyltransferase family 1 member A1, transcript variant X1
54. UBE2G1 ENSGALG00000001441 1234 0.868 - - - - - 0.868 - - - - ubiquitin conjugating enzyme E2 G1 [Source:NCBI gene;Acc:770961]
55. SLC25A26 ENSGALG00000007467 255 0.868 - - - - - 0.868 - - - - solute carrier family 25 member 26 [Source:NCBI gene;Acc:416084]
56. TMEM82 16 0.867 - - - 0.867 - - - - - - transmembrane protein 82, transcript variant X2
57. CACNA1S 63 0.866 - - - - - 0.866 - - - - calcium voltage-gated channel subunit alpha1 S, transcript variant X4
58. SIGIRR ENSGALG00000004267 72 0.862 - - - 0.862 - - - - - - single Ig and TIR domain containing [Source:NCBI gene;Acc:422995]
59. REPS1 ENSGALG00000013829 2271 0.862 - - - 0.862 - - - - - - RALBP1 associated Eps domain containing 1 [Source:NCBI gene;Acc:421678]
60. FMN1 ENSGALG00000009723 100 0.86 - - - - - 0.860 - - - - formin 1 [Source:NCBI gene;Acc:386747]
61. TTC26 ENSGALG00000011847 80 0.859 - - - - - 0.859 - - - - tetratricopeptide repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:21882]
62. RHOV ENSGALG00000028047 75 0.858 - - - - - 0.858 - - - - ras homolog family member V [Source:HGNC Symbol;Acc:HGNC:18313]
63. KIF13A ENSGALG00000012689 119 0.856 - - - - - 0.856 - - - - kinesin family member 13A [Source:HGNC Symbol;Acc:HGNC:14566]
64. ZFYVE28 15 0.856 - - - - - 0.856 - - - - zinc finger FYVE-type containing 28, transcript variant X3
65. SLC24A2 ENSGALG00000015080 54 0.856 - - - 0.856 - - - - - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
66. CPM ENSGALG00000009945 140 0.852 - - - 0.852 - - - - - - carboxypeptidase M [Source:NCBI gene;Acc:417843]
67. ENSGALG00000014946 ENSGALG00000014946 40 0.851 - - - - - 0.851 - - - -
68. MGAT4D ENSGALG00000009830 23 0.85 - - - 0.850 - - - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
69. MRC1 ENSGALG00000008629 259 0.85 - - - - - 0.850 - - - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
70. A1CF ENSGALG00000003765 36 0.848 - - - 0.848 - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
71. C9orf91 C9orf91 629 0.847 - - - - - 0.847 - - - -
72. ENSGALG00000028778 ENSGALG00000028778 47 0.843 - - - 0.843 - - - - - -
73. ENSGALG00000009344 ENSGALG00000009344 330 0.838 - - - 0.838 - - - - - -
74. IL2RB ENSGALG00000012472 7 0.838 - - - - - 0.838 - - - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
75. PPP2CA_1 ENSGALG00000006462 3170 0.837 - - - - - 0.837 - - - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
76. ENSGALG00000004703 ENSGALG00000004703 112 0.836 - - - 0.836 - - - - - -
77. HNMT ENSGALG00000012377 227 0.836 - - - - - 0.836 - - - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
78. MADCAM1 ENSGALG00000028341 6 0.835 - - - - - 0.835 - - - - mucosal vascular addressin cell adhesion molecule 1
79. FAM171A1 ENSGALG00000008764 349 0.834 - - - - - 0.834 - - - - family with sequence similarity 171 member A1 [Source:HGNC Symbol;Acc:HGNC:23522]
80. BMP-10 BMP-10 22 0.832 - - - 0.832 - - - - - -
81. MALSU1 ENSGALG00000010954 51 0.831 - - - 0.831 - - - - - - mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
82. KBTBD8 ENSGALG00000007569 20 0.831 - - - 0.831 - - - - - - kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
83. MASP1 ENSGALG00000007419 141 0.829 - - - 0.829 - - - - - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
84. TRPC4 ENSGALG00000017044 300 0.827 - - - - - 0.827 - - - - transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
85. ENSGALG00000025953 ENSGALG00000025953 65 0.826 - - - - - 0.826 - - - -
86. AHNAK2 58 0.825 - - - 0.825 - - - - - - AHNAK nucleoprotein 2, transcript variant X2
87. MIS18A ENSGALG00000015884 25 0.825 - - - - - 0.825 - - - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
88. Mar-02 Mar-02 7 0.824 - - - - - 0.824 - - - -
89. ING5 ENSGALG00000006317 149 0.822 - - - - - 0.822 - - - - inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
90. BMP2 ENSGALG00000029301 379 0.821 - - - 0.821 - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
91. ZNF346 ENSGALG00000001144 96 0.821 - - - - - 0.821 - - - - zinc finger protein 346 [Source:HGNC Symbol;Acc:HGNC:16403]
92. ENSGALG00000023180 ENSGALG00000023180 83 0.821 - - - 0.821 - - - - - -
93. PALB2 ENSGALG00000006078 1549 0.82 - - - - - 0.820 - - - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
94. EOMES ENSGALG00000027247 27 0.819 - - - - - 0.819 - - - - Gallus gallus eomesodermin (EOMES), mRNA. [Source:RefSeq mRNA;Acc:NM_001321555]
95. RYR3 ENSGALG00000009705 30 0.817 - - - - - 0.817 - - - - ryanodine receptor 3 [Source:NCBI gene;Acc:396111]
96. MTHFD1L ENSGALG00000012412 35 0.816 - - - 0.816 - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:HGNC Symbol;Acc:HGNC:21055]
97. ABCB10 ENSGALG00000011096 1407 0.815 - - - - - - - - - 0.815 ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
98. ANKFY1 ENSGALG00000001467 21 0.815 - - - - - 0.815 - - - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
99. ADORA2A ENSGALG00000006642 178 0.815 - - - - - 0.815 - - - - adenosine A2a receptor [Source:HGNC Symbol;Acc:HGNC:263]
100. VIPAS39 ENSGALG00000010459 2090 0.813 - - - 0.813 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA