Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HMBOX1

Gene Name Gene ID Reads Annotation
HMBOX1 HMBOX1 67










Genes with expression patterns similar to HMBOX1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMBOX1 HMBOX1 67 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:dkey-277m11.2 ENSDARG00000094879 15 2.549 - 1.000 0.728 - - 0.821 - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
3. r3hcc1 ENSDARG00000099593 188 2.49 0.718 0.919 - - - 0.853 - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
4. CR388095.2 ENSDARG00000117604 76 2.402 - - - - 0.818 0.798 - - 0.786
5. sdhda ENSDARG00000055712 50 2.396 - - 0.758 - - 0.821 0.817 - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
6. CU302326.2 CU302326.2 54 1.812 - 1.000 - - - - 0.812 - -
7. evi5b ENSDARG00000070839 239 1.752 - 1.000 - - 0.752 - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
8. si:dkey-177p2.18 ENSDARG00000091633 91 1.742 - 1.000 - - - 0.742 - - - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
9. cygb1 ENSDARG00000099371 63 1.735 0.900 - - - - - - - 0.835 cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
10. atn1 ENSDARG00000092067 257 1.734 - 1.000 - - - - 0.734 - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
11. zgc:171544 zgc:171544 11 1.734 - 1.000 0.734 - - - - - -
12. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.733 - - - - - 0.885 0.848 - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
13. si:dkey-3d18.4 si:dkey-3d18.4 43 1.73 - 0.815 - - - - 0.915 - -
14. si:ch211-106h4.9 ENSDARG00000075706 36 1.707 - 1.000 0.707 - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
15. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1.706 - 1.000 0.706 - - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
16. hdac6 ENSDARG00000008384 144 1.666 - - - - - 0.852 0.814 - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
17. CU367845.1 CU367845.1 215 1.662 - - - - - 0.834 0.828 - -
18. mfng ENSDARG00000042925 104 1.641 - 0.837 - - - 0.804 - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
19. sp5l ENSDARG00000115868 361 1.639 - - - - - 0.807 - - 0.832 Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
20. syt5b ENSDARG00000011640 70 1.629 - 0.808 - - - 0.821 - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
21. rab3db ENSDARG00000101534 45 1.6 0.807 - - - - 0.793 - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
22. batf3 ENSDARG00000042577 34 1.592 - - 0.758 - - 0.834 - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
23. 5S_rRNA_20 5S_rRNA_20 79 1.584 - - - - 0.834 - 0.750 - -
24. PGBD4_2 PGBD4_2 184 1.578 - - - - - 0.868 - - 0.710
25. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.574 - 0.808 - - - 0.766 - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
26. GCNT4 GCNT4 66 1.566 - - - - - 0.788 0.778 - -
27. CCNJ ENSDARG00000059917 115 1.558 - - - - - - 0.792 - 0.766 cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
28. zmiz1b ENSDARG00000102279 26 1.552 - 0.808 - - - - 0.744 - - zinc finger, MIZ-type containing 1b [Source:ZFIN;Acc:ZDB-GENE-120206-3]
29. tysnd1 ENSDARG00000074895 85 1.543 - - - - - 0.771 - - 0.772 trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
30. wbp2 ENSDARG00000056605 101 1.53 - - - - - 0.723 0.807 - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
31. zgc:113279 ENSDARG00000099533 156 1.526 - 0.762 - - 0.764 - - - - zgc:113279 [Source:ZFIN;Acc:ZDB-GENE-050522-529]
32. lace1b lace1b 126 1.526 - - - - - - 0.789 - 0.737
33. edn1 ENSDARG00000036912 74 1.51 - 0.808 - - 0.702 - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
34. si:ch211-284e13.5 ENSDARG00000094725 68 1.503 - - - - 0.739 0.764 - - - si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
35. kdelc2 ENSDARG00000021408, ENSDARG00000112910 968 1.464 - - - - - 0.726 - - 0.738 KDEL (Lys-Asp-Glu-Leu) containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-142]
36. BX119963.1 ENSDARG00000096135 28 1.463 - 0.712 - - 0.751 - - - -
37. tert ENSDARG00000042637 463 1.461 - - - - - 0.737 0.724 - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
38. SNORA63_2 SNORA63_2 6 1.448 - - 0.714 0.734 - - - - -
39. anks4b ENSDARG00000036846 8 1 - 1.000 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
40. slc35f3a ENSDARG00000075909 1 1 - 1.000 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
41. dnaaf3 ENSDARG00000092662 20 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
42. CA4 CA4 1 1 - 1.000 - - - - - - -
43. neurod2 ENSDARG00000016854 6 1 - 1.000 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
44. RP1L1 RP1L1 15 1 - 1.000 - - - - - - -
45. tmc1 23 1 - 1.000 - - - - - - - transmembrane channel-like 1, transcript variant X1
46. sept4a ENSDARG00000010385 75 1 - 1.000 - - - - - - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
47. si:ch211-103a14.1 si:ch211-103a14.1 1 1 - 1.000 - - - - - - -
48. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
49. cntnap5a ENSDARG00000073920 39 1 - 1.000 - - - - - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
50. BX511182.1 BX511182.1 8 1 - 1.000 - - - - - - -
51. MFAP4_4 MFAP4_4 9 1 - 1.000 - - - - - - -
52. si:ch211-79g12.1 ENSDARG00000116692 2 1 - 1.000 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
53. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - 1.000 - - - - - - -
54. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - 1.000 - - - - - - -
55. BX682552.2_1 BX682552.2_1 37 1 - 1.000 - - - - - - -
56. USP53 USP53 5 1 - 1.000 - - - - - - -
57. cabp1a ENSDARG00000019990 110 1 - 1.000 - - - - - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
58. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - 1.000 - - - - - - -
59. CABZ01081674.1 CABZ01081674.1 15 1 - 1.000 - - - - - - -
60. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
61. si:ch211-223f7.1 si:ch211-223f7.1 38 1 - 1.000 - - - - - - -
62. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
63. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
64. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
65. rapgef5b ENSDARG00000074307 112 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
66. cx50.5 cx50.5 15 1 - 1.000 - - - - - - -
67. QSOX2 ENSDARG00000077174 26 1 - 1.000 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
68. F13A1 F13A1 1 1 - 1.000 - - - - - - -
69. zp3a.1 ENSDARG00000042129 18 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
70. spo11 ENSDARG00000013837 7 1 - 1.000 - - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
71. si:dkey-25i10.5 si:dkey-25i10.5 18 1 - 1.000 - - - - - - -
72. si:dkey-176g1.4 si:dkey-176g1.4 1 1 - 1.000 - - - - - - -
73. EFEMP1 32 1 - 1.000 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
74. PBRM1 ENSDARG00000003877 225 1 - 1.000 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
75. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - 1.000 - - - - - - -
76. si:ch211-229i14.2 ENSDARG00000086048 19 1 - 1.000 - - - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
77. MAP7_1 MAP7_1 42 1 - 1.000 - - - - - - -
78. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
79. oxgr1a.1 ENSDARG00000033684 24 1 - 1.000 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
80. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 1 - 1.000 - - - - - - -
81. sumo2a ENSDARG00000104390 4 1 - 1.000 - - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
82. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - 1.000 - - - - - - -
83. CABZ01061914.2 CABZ01061914.2 2 1 - 1.000 - - - - - - -
84. si:ch211-119c24.1 si:ch211-119c24.1 17 1 - 1.000 - - - - - - -
85. SNTB2 ENSDARG00000051763 2 1 - 1.000 - - - - - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
86. PGBD4_4 PGBD4_4 15 1 - 1.000 - - - - - - -
87. pcolce2a ENSDARG00000008450 22 1 - 1.000 - - - - - - - procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]
88. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
89. ugt5e1 ENSDARG00000058048 25 1 - 1.000 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
90. BX957311.1 ENSDARG00000097710 1 1 - 1.000 - - - - - - -
91. ctso ENSDARG00000052855 29 1 - 1.000 - - - - - - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
92. aftphb ENSDARG00000071347 161 1 - 1.000 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
93. bgna ENSDARG00000017884 9 1 - 1.000 - - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
94. AL929453.1 ENSDARG00000115950 31 1 - 1.000 - - - - - - -
95. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - 1.000 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
96. lsm14b ENSDARG00000025386 23 1 - 1.000 - - - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
97. fmn2b ENSDARG00000061778 179 1 - 1.000 - - - - - - - formin 2b [Source:ZFIN;Acc:ZDB-GENE-080225-35]
98. im:7136021 ENSDARG00000054128 79 1 - 1.000 - - - - - - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
99. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - 1.000 - - - - - - -
100. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]

There are 1101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA