Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMBOX1

Gene Name Gene ID Reads Annotation
HMBOX1 HMBOX1 67










Genes with expression patterns similar to HMBOX1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMBOX1 HMBOX1 67 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:dkey-277m11.2 ENSDARG00000094879 15 2.549 - 1.000 0.728 - - 0.821 - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
3. r3hcc1 ENSDARG00000099593 188 2.49 0.718 0.919 - - - 0.853 - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
4. CR388095.2 ENSDARG00000117604 76 2.402 - - - - 0.818 0.798 - - 0.786
5. sdhda ENSDARG00000055712 50 2.396 - - 0.758 - - 0.821 0.817 - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
6. CU302326.2 CU302326.2 54 1.812 - 1.000 - - - - 0.812 - -
7. evi5b ENSDARG00000070839 239 1.752 - 1.000 - - 0.752 - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
8. si:dkey-177p2.18 ENSDARG00000091633 91 1.742 - 1.000 - - - 0.742 - - - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
9. cygb1 ENSDARG00000099371 63 1.735 0.900 - - - - - - - 0.835 cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
10. zgc:171544 zgc:171544 11 1.734 - 1.000 0.734 - - - - - -
11. atn1 ENSDARG00000092067 257 1.734 - 1.000 - - - - 0.734 - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
12. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.733 - - - - - 0.885 0.848 - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
13. si:dkey-3d18.4 si:dkey-3d18.4 43 1.73 - 0.815 - - - - 0.915 - -
14. si:ch211-106h4.9 ENSDARG00000075706 36 1.707 - 1.000 0.707 - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
15. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1.706 - 1.000 0.706 - - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
16. hdac6 ENSDARG00000008384 144 1.666 - - - - - 0.852 0.814 - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
17. CU367845.1 CU367845.1 215 1.662 - - - - - 0.834 0.828 - -
18. mfng ENSDARG00000042925 104 1.641 - 0.837 - - - 0.804 - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
19. sp5l ENSDARG00000115868 361 1.639 - - - - - 0.807 - - 0.832 Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
20. syt5b ENSDARG00000011640 70 1.629 - 0.808 - - - 0.821 - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
21. rab3db ENSDARG00000101534 45 1.6 0.807 - - - - 0.793 - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
22. batf3 ENSDARG00000042577 34 1.592 - - 0.758 - - 0.834 - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
23. 5S_rRNA_20 5S_rRNA_20 79 1.584 - - - - 0.834 - 0.750 - -
24. PGBD4_2 PGBD4_2 184 1.578 - - - - - 0.868 - - 0.710
25. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.574 - 0.808 - - - 0.766 - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
26. GCNT4 GCNT4 66 1.566 - - - - - 0.788 0.778 - -
27. CCNJ ENSDARG00000059917 115 1.558 - - - - - - 0.792 - 0.766 cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
28. zmiz1b ENSDARG00000102279 26 1.552 - 0.808 - - - - 0.744 - - zinc finger, MIZ-type containing 1b [Source:ZFIN;Acc:ZDB-GENE-120206-3]
29. tysnd1 ENSDARG00000074895 85 1.543 - - - - - 0.771 - - 0.772 trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
30. wbp2 ENSDARG00000056605 101 1.53 - - - - - 0.723 0.807 - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
31. lace1b lace1b 126 1.526 - - - - - - 0.789 - 0.737
32. zgc:113279 ENSDARG00000099533 156 1.526 - 0.762 - - 0.764 - - - - zgc:113279 [Source:ZFIN;Acc:ZDB-GENE-050522-529]
33. edn1 ENSDARG00000036912 74 1.51 - 0.808 - - 0.702 - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
34. si:ch211-284e13.5 ENSDARG00000094725 68 1.503 - - - - 0.739 0.764 - - - si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
35. kdelc2 ENSDARG00000021408, ENSDARG00000112910 968 1.464 - - - - - 0.726 - - 0.738 KDEL (Lys-Asp-Glu-Leu) containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-142]
36. BX119963.1 ENSDARG00000096135 28 1.463 - 0.712 - - 0.751 - - - -
37. tert ENSDARG00000042637 463 1.461 - - - - - 0.737 0.724 - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
38. SNORA63_2 SNORA63_2 6 1.448 - - 0.714 0.734 - - - - -
39. CR762484.2 CR762484.2 42 1 - 1.000 - - - - - - -
40. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1 - 1.000 - - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
41. sid1 ENSDARG00000095540 1 1 - 1.000 - - - - - - - secreted immunoglobulin domain 1 [Source:ZFIN;Acc:ZDB-GENE-020620-1]
42. FASN ENSDARG00000087657 18 1 - 1.000 - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
43. si:ch211-151h10.2 ENSDARG00000068250 14 1 - 1.000 - - - - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
44. si:ch211-161n3.3 ENSDARG00000092989 9 1 - 1.000 - - - - - - - si:ch211-161n3.3 [Source:ZFIN;Acc:ZDB-GENE-041210-102]
45. zgc:136908 ENSDARG00000011983 97 1 - 1.000 - - - - - - - zgc:136908 [Source:ZFIN;Acc:ZDB-GENE-060312-22]
46. st3gal1l ENSDARG00000079310 10 1 - 1.000 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
47. si:ch211-255i3.4 ENSDARG00000095152 7 1 - 1.000 - - - - - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
48. si:ch73-44m9.1 ENSDARG00000077115 3 1 - 1.000 - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
49. si:ch211-117m20.4 ENSDARG00000094286 7 1 - 1.000 - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
50. olfml2bb ENSDARG00000021480 256 1 - 1.000 - - - - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
51. zgc:173594 57 1 - 1.000 - - - - - - - zgc:173594
52. FAM183B FAM183B 25 1 - 1.000 - - - - - - -
53. si:dkey-222f2.1 ENSDARG00000043242 192 1 - 1.000 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
54. BX004980.1 ENSDARG00000099680 10 1 - 1.000 - - - - - - -
55. galca ENSDARG00000037064 12 1 - 1.000 - - - - - - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
56. zgc:163077 ENSDARG00000101593 60 1 - 1.000 - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
57. si:dkey-16i5.8 ENSDARG00000096722 1 1 - 1.000 - - - - - - - si:dkey-16i5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1207]
58. ADTRP ADTRP 2 1 - 1.000 - - - - - - -
59. atp8b3 ENSDARG00000042285 31 1 - 1.000 - - - - - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
60. tlr5a ENSDARG00000044415 3 1 - 1.000 - - - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
61. rictora ENSDARG00000100867 20 1 - 1.000 - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
62. ugt2b5 ugt2b5 17 1 - 1.000 - - - - - - -
63. LRAT LRAT 12 1 - 1.000 - - - - - - -
64. zgc:123217 ENSDARG00000059026 292 1 - 1.000 - - - - - - - zgc:123217 [Source:ZFIN;Acc:ZDB-GENE-051113-188]
65. CR854923.1 CR854923.1 18 1 - 1.000 - - - - - - -
66. si:ch211-134d5.3 si:ch211-134d5.3 1 1 - 1.000 - - - - - - -
67. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - 1.000 - - - - - - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
68. creb5b ENSDARG00000070536 9 1 - 1.000 - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
69. ROCK2 ROCK2 8 1 - 1.000 - - - - - - -
70. CR628395.1 ENSDARG00000116298 75 1 - 1.000 - - - - - - -
71. serpinb1l2 ENSDARG00000070396 37 1 - 1.000 - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
72. drd4-rs ENSDARG00000001912 45 1 - 1.000 - - - - - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
73. MPZL2 MPZL2 31 1 - 1.000 - - - - - - -
74. TMPRSS7 5 1 - 1.000 - - - - - - - transmembrane protease, serine 7
75. si:dkeyp-3f10.12 ENSDARG00000105791 3 1 - 1.000 - - - - - - - si:dkeyp-3f10.12 [Source:ZFIN;Acc:ZDB-GENE-081104-20]
76. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
77. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - 1.000 - - - - - - -
78. fmn2b ENSDARG00000061778 179 1 - 1.000 - - - - - - - formin 2b [Source:ZFIN;Acc:ZDB-GENE-080225-35]
79. im:7136021 ENSDARG00000054128 79 1 - 1.000 - - - - - - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
80. AL929453.1 ENSDARG00000115950 31 1 - 1.000 - - - - - - -
81. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - 1.000 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
82. lsm14b ENSDARG00000025386 23 1 - 1.000 - - - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
83. zgc:171501 ENSDARG00000075375 11 1 - 1.000 - - - - - - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
84. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - 1.000 - - - - - - -
85. EGR4_1 EGR4_1 14 1 - 1.000 - - - - - - -
86. fgf10b ENSDARG00000100475 17 1 - 1.000 - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
87. CABZ01070007.1 CABZ01070007.1 5 1 - 1.000 - - - - - - -
88. ABR ENSDARG00000095180 4 1 - 1.000 - - - - - - - ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
89. si:dkey-20i20.12 si:dkey-20i20.12 7 1 - 1.000 - - - - - - -
90. CLEC17A CLEC17A 42 1 - 1.000 - - - - - - -
91. cnnm4 cnnm4 2 1 - 1.000 - - - - - - -
92. si:dkey-250k15.4 ENSDARG00000092169 19 1 - 1.000 - - - - - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
93. si:dkey-7i4.1 ENSDARG00000086897 2 1 - 1.000 - - - - - - - si:dkey-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-081028-64]
94. ptk2.2 ptk2.2 3 1 - 1.000 - - - - - - -
95. ebi3 ENSDARG00000053620 5 1 - 1.000 - - - - - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
96. CLDND1_1 CLDND1_1 50 1 - 1.000 - - - - - - -
97. SNORD83 SNORD83 43 1 - 1.000 - - - - - - -
98. PPP1R16A ENSDARG00000076980 40 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
99. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - 1.000 - - - - - - -
100. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - 1.000 - - - - - - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]

There are 1101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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