Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HMBOX1

Gene Name Gene ID Reads Annotation
HMBOX1 HMBOX1 67










Genes with expression patterns similar to HMBOX1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMBOX1 HMBOX1 67 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:dkey-277m11.2 ENSDARG00000094879 15 2.549 - 1.000 0.728 - - 0.821 - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
3. r3hcc1 ENSDARG00000099593 188 2.49 0.718 0.919 - - - 0.853 - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
4. CR388095.2 ENSDARG00000117604 76 2.402 - - - - 0.818 0.798 - - 0.786
5. sdhda ENSDARG00000055712 50 2.396 - - 0.758 - - 0.821 0.817 - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
6. CU302326.2 CU302326.2 54 1.812 - 1.000 - - - - 0.812 - -
7. evi5b ENSDARG00000070839 239 1.752 - 1.000 - - 0.752 - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
8. si:dkey-177p2.18 ENSDARG00000091633 91 1.742 - 1.000 - - - 0.742 - - - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
9. cygb1 ENSDARG00000099371 63 1.735 0.900 - - - - - - - 0.835 cytoglobin 1 [Source:ZFIN;Acc:ZDB-GENE-020513-1]
10. atn1 ENSDARG00000092067 257 1.734 - 1.000 - - - - 0.734 - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
11. zgc:171544 zgc:171544 11 1.734 - 1.000 0.734 - - - - - -
12. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 1.733 - - - - - 0.885 0.848 - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
13. si:dkey-3d18.4 si:dkey-3d18.4 43 1.73 - 0.815 - - - - 0.915 - -
14. si:ch211-106h4.9 ENSDARG00000075706 36 1.707 - 1.000 0.707 - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
15. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1.706 - 1.000 0.706 - - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
16. hdac6 ENSDARG00000008384 144 1.666 - - - - - 0.852 0.814 - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
17. CU367845.1 CU367845.1 215 1.662 - - - - - 0.834 0.828 - -
18. mfng ENSDARG00000042925 104 1.641 - 0.837 - - - 0.804 - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
19. sp5l ENSDARG00000115868 361 1.639 - - - - - 0.807 - - 0.832 Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
20. syt5b ENSDARG00000011640 70 1.629 - 0.808 - - - 0.821 - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
21. rab3db ENSDARG00000101534 45 1.6 0.807 - - - - 0.793 - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
22. batf3 ENSDARG00000042577 34 1.592 - - 0.758 - - 0.834 - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
23. 5S_rRNA_20 5S_rRNA_20 79 1.584 - - - - 0.834 - 0.750 - -
24. PGBD4_2 PGBD4_2 184 1.578 - - - - - 0.868 - - 0.710
25. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1.574 - 0.808 - - - 0.766 - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
26. GCNT4 GCNT4 66 1.566 - - - - - 0.788 0.778 - -
27. CCNJ ENSDARG00000059917 115 1.558 - - - - - - 0.792 - 0.766 cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
28. zmiz1b ENSDARG00000102279 26 1.552 - 0.808 - - - - 0.744 - - zinc finger, MIZ-type containing 1b [Source:ZFIN;Acc:ZDB-GENE-120206-3]
29. tysnd1 ENSDARG00000074895 85 1.543 - - - - - 0.771 - - 0.772 trypsin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8525]
30. wbp2 ENSDARG00000056605 101 1.53 - - - - - 0.723 0.807 - - WW domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-137]
31. zgc:113279 ENSDARG00000099533 156 1.526 - 0.762 - - 0.764 - - - - zgc:113279 [Source:ZFIN;Acc:ZDB-GENE-050522-529]
32. lace1b lace1b 126 1.526 - - - - - - 0.789 - 0.737
33. edn1 ENSDARG00000036912 74 1.51 - 0.808 - - 0.702 - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
34. si:ch211-284e13.5 ENSDARG00000094725 68 1.503 - - - - 0.739 0.764 - - - si:ch211-284e13.5 [Source:ZFIN;Acc:ZDB-GENE-060526-162]
35. kdelc2 ENSDARG00000021408, ENSDARG00000112910 968 1.464 - - - - - 0.726 - - 0.738 KDEL (Lys-Asp-Glu-Leu) containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-142]
36. BX119963.1 ENSDARG00000096135 28 1.463 - 0.712 - - 0.751 - - - -
37. tert ENSDARG00000042637 463 1.461 - - - - - 0.737 0.724 - - telomerase reverse transcriptase [Source:ZFIN;Acc:ZDB-GENE-080405-1]
38. SNORA63_2 SNORA63_2 6 1.448 - - 0.714 0.734 - - - - -
39. si:dkey-222f2.1 ENSDARG00000043242 192 1 - 1.000 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
40. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - 1.000 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
41. zgc:173594 57 1 - 1.000 - - - - - - - zgc:173594
42. atp8b3 ENSDARG00000042285 31 1 - 1.000 - - - - - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
43. SNTB2 ENSDARG00000051763 2 1 - 1.000 - - - - - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
44. fmn2b ENSDARG00000061778 179 1 - 1.000 - - - - - - - formin 2b [Source:ZFIN;Acc:ZDB-GENE-080225-35]
45. galca ENSDARG00000037064 12 1 - 1.000 - - - - - - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
46. zgc:136908 ENSDARG00000011983 97 1 - 1.000 - - - - - - - zgc:136908 [Source:ZFIN;Acc:ZDB-GENE-060312-22]
47. tlr5a ENSDARG00000044415 3 1 - 1.000 - - - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
48. si:ch211-161n3.3 ENSDARG00000092989 9 1 - 1.000 - - - - - - - si:ch211-161n3.3 [Source:ZFIN;Acc:ZDB-GENE-041210-102]
49. im:7136021 ENSDARG00000054128 79 1 - 1.000 - - - - - - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
50. PGBD4_4 PGBD4_4 15 1 - 1.000 - - - - - - -
51. CLDND1_1 CLDND1_1 50 1 - 1.000 - - - - - - -
52. F13A1 F13A1 1 1 - 1.000 - - - - - - -
53. USP53 USP53 5 1 - 1.000 - - - - - - -
54. ugt2b5 ugt2b5 17 1 - 1.000 - - - - - - -
55. PBRM1 ENSDARG00000003877 225 1 - 1.000 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
56. BX682552.2_1 BX682552.2_1 37 1 - 1.000 - - - - - - -
57. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - 1.000 - - - - - - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
58. si:ch211-119c24.1 si:ch211-119c24.1 17 1 - 1.000 - - - - - - -
59. si:ch211-79g12.1 ENSDARG00000116692 2 1 - 1.000 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
60. psma6l ENSDARG00000043899 3 1 - 1.000 - - - - - - - proteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
61. cntnap5a ENSDARG00000073920 39 1 - 1.000 - - - - - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
62. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
63. CABZ01061914.2 CABZ01061914.2 2 1 - 1.000 - - - - - - -
64. olfml2bb ENSDARG00000021480 256 1 - 1.000 - - - - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
65. CR628395.1 ENSDARG00000116298 75 1 - 1.000 - - - - - - -
66. MPZL2 MPZL2 31 1 - 1.000 - - - - - - -
67. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
68. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - 1.000 - - - - - - -
69. EFEMP1 32 1 - 1.000 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
70. si:ch211-134d5.3 si:ch211-134d5.3 1 1 - 1.000 - - - - - - -
71. lsm14b ENSDARG00000025386 23 1 - 1.000 - - - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
72. CLEC17A CLEC17A 42 1 - 1.000 - - - - - - -
73. BX511182.1 BX511182.1 8 1 - 1.000 - - - - - - -
74. ctso ENSDARG00000052855 29 1 - 1.000 - - - - - - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
75. mxe ENSDARG00000014427 6 1 - 1.000 - - - - - - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
76. LRAT LRAT 12 1 - 1.000 - - - - - - -
77. tmc1 23 1 - 1.000 - - - - - - - transmembrane channel-like 1, transcript variant X1
78. si:dkey-250k15.4 ENSDARG00000092169 19 1 - 1.000 - - - - - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
79. gprc6a ENSDARG00000005371 7 1 - 1.000 - - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
80. CR854923.1 CR854923.1 18 1 - 1.000 - - - - - - -
81. svilb_1 ENSDARG00000014651 60 1 - 1.000 - - - - - - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
82. QSOX2 ENSDARG00000077174 26 1 - 1.000 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
83. BX649417.1 ENSDARG00000117387 1 1 - 1.000 - - - - - - -
84. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - 1.000 - - - - - - -
85. PPP1R16A ENSDARG00000076980 40 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
86. ABR ENSDARG00000095180 4 1 - 1.000 - - - - - - - ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
87. sept4a ENSDARG00000010385 75 1 - 1.000 - - - - - - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
88. drd4-rs ENSDARG00000001912 45 1 - 1.000 - - - - - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
89. oxgr1a.1 ENSDARG00000033684 24 1 - 1.000 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
90. cabp1a ENSDARG00000019990 110 1 - 1.000 - - - - - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
91. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
92. zgc:163077 ENSDARG00000101593 60 1 - 1.000 - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
93. zgc:123217 ENSDARG00000059026 292 1 - 1.000 - - - - - - - zgc:123217 [Source:ZFIN;Acc:ZDB-GENE-051113-188]
94. fgf10b ENSDARG00000100475 17 1 - 1.000 - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
95. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1 - 1.000 - - - - - - - SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
96. si:dkeyp-3f10.12 ENSDARG00000105791 3 1 - 1.000 - - - - - - - si:dkeyp-3f10.12 [Source:ZFIN;Acc:ZDB-GENE-081104-20]
97. zp3a.1 ENSDARG00000042129 18 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
98. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
99. CR762484.2 CR762484.2 42 1 - 1.000 - - - - - - -
100. SNORD83 SNORD83 43 1 - 1.000 - - - - - - -

There are 1101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA