Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HIRA

Gene Name Gene ID Reads Annotation
HIRA ENSGALG00000033598 296 histone cell cycle regulator [Source:NCBI gene;Acc:374074]











Genes with expression patterns similar to HIRA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HIRA ENSGALG00000033598 296 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 histone cell cycle regulator [Source:NCBI gene;Acc:374074]
2. DLEC1 ENSGALG00000005826 23 1.675 - - - - - - 0.735 - - 0.940 DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
3. ENSGALG00000005723 ENSGALG00000005723 36 1.566 - - 0.747 - - - - - - 0.819
4. TMEFF2 ENSGALG00000007759 93 1.456 - - - - - - 0.723 - - 0.733 transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
5. gga-mir-6561 ENSGALG00000026650 135 1.433 - - 0.704 - - - - - - 0.729 gga-mir-6561 [Source:miRBase;Acc:MI0022379]
6. TMEM189 ENSGALG00000026906 14 0.94 - - - - - - - - - 0.940 transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
7. DNAJC28 ENSGALG00000037414 6 0.94 - - - - - - - - - 0.940 DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
8. ENSGALG00000025967 ENSGALG00000025967 7 0.94 - - - - - - - - - 0.940
9. ENSGALG00000021884 ENSGALG00000021884 29 0.94 - - - - - - - - - 0.940
10. FABP2 ENSGALG00000011986 15 0.94 - - - - - - - - - 0.940 fatty acid binding protein 2 [Source:NCBI gene;Acc:422678]
11. NUB1 ENSGALG00000006181 269 0.938 - - - - - - - - - 0.938 negative regulator of ubiquitin like proteins 1 [Source:NCBI gene;Acc:420433]
12. PDE6H ENSGALG00000025735 37 0.935 - - - - - - - - - 0.935 phosphodiesterase 6H [Source:NCBI gene;Acc:378929]
13. ENSGALG00000000865 ENSGALG00000000865 46 0.931 - - - - - - - - - 0.931
14. STS ENSGALG00000016622 11 0.93 - - - - - - - - - 0.930 steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
15. GUCY1B3 29 0.924 - - - - - - - - - 0.924 guanylate cyclase 1 soluble subunit beta, transcript variant X2
16. GATSL3 668 0.924 - - - - - - - - - 0.924 GATS protein like 3, transcript variant X2
17. GFAP ENSGALG00000000909 21 0.92 - - - - - - - - - 0.920 glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
18. SNORA75 SNORA75 41 0.916 - - - - - - - - - 0.916
19. CFD ENSGALG00000040832 222 0.915 - - - - - - - - - 0.915 complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
20. FABP6 ENSGALG00000001445 1254 0.911 - - - - - - - - - 0.911 fatty acid binding protein 6 [Source:NCBI gene;Acc:416154]
21. CARD11 ENSGALG00000004398 58 0.909 - - - - - - 0.909 - - - caspase recruitment domain family member 11 [Source:NCBI gene;Acc:416476]
22. LINS LINS 18 0.909 - - - - - - 0.909 - - -
23. HBEGF ENSGALG00000000949 15 0.909 - - - - - - 0.909 - - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
24. MAP2K1 ENSGALG00000007687 250 0.908 - - - - - - - - - 0.908 mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
25. MIF4GD ENSGALG00000026715 41 0.908 - - - - - - - - - 0.908 MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
26. DSEL ENSGALG00000042505 92 0.905 - - - - - - - - - 0.905 dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
27. TNS3 ENSGALG00000039139 63 0.903 - - - - - - - - - 0.903 tensin 3 [Source:NCBI gene;Acc:420792]
28. INF2 ENSGALG00000011608 36 0.903 - - - - - - - - - 0.903 inverted formin, FH2 and WH2 domain containing [Source:HGNC Symbol;Acc:HGNC:23791]
29. IGF2R ENSGALG00000011621 81 0.903 - - - - - - - - - 0.903 insulin like growth factor 2 receptor [Source:NCBI gene;Acc:395817]
30. CASR ENSGALG00000038405 53 0.9 - - - - - - - - - 0.900 calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
31. ENSGALG00000027667 ENSGALG00000027667 12 0.9 - - - - - - - - - 0.900
32. SLC22A18 ENSGALG00000006454 24 0.892 - - - - - - - - - 0.892 solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
33. ILDR2 ENSGALG00000015458 16 0.891 - - - - - - - - - 0.891 immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
34. OSCP1 ENSGALG00000002123 1129 0.89 - - - - - - - - - 0.890 organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
35. TMEM56 ENSGALG00000005580 10 0.89 - - - - - - - 0.890 - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
36. YTHDC1 ENSGALG00000035906 471 0.889 - - - - - - - - - 0.889 YTH domain containing 1 [Source:NCBI gene;Acc:422656]
37. NRBP2 ENSGALG00000029760 1902 0.885 - - - - - - - - - 0.885 nuclear receptor binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19339]
38. PCNX PCNX 110 0.884 - - - - - - - - - 0.884
39. TTPA ENSGALG00000030031 500 0.884 - - - - - - - - - 0.884 alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
40. C3ORF64 C3ORF64 49 0.876 - - - - - - - - - 0.876
41. GPATCH2L ENSGALG00000010350 8 0.876 - - - - - - - - - 0.876 G-patch domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:20210]
42. PLEKHA8 ENSGALG00000011185 101 0.872 - - 0.872 - - - - - - - pleckstrin homology domain containing A8 [Source:HGNC Symbol;Acc:HGNC:30037]
43. HSD3B2 HSD3B2 55 0.87 - - - - - - - - - 0.870
44. BBS9 ENSGALG00000031650 13 0.868 - - - - - - - - - 0.868 Bardet-Biedl syndrome 9, transcript variant X5
45. TRIM13 ENSGALG00000017011 92 0.868 - - - - - - - - - 0.868 tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
46. ARL11 ENSGALG00000022733 490 0.868 - - - - - - - - - 0.868 ADP ribosylation factor like GTPase 11 [Source:HGNC Symbol;Acc:HGNC:24046]
47. MAP3K14 ENSGALG00000000685 57 0.868 - - - - - - - - - 0.868 mitogen-activated protein kinase kinase kinase 14 [Source:NCBI gene;Acc:419964]
48. STK40 ENSGALG00000032925 340 0.867 - - - - - - - - - 0.867 serine/threonine kinase 40 [Source:NCBI gene;Acc:395120]
49. SCNN1G ENSGALG00000006270 178 0.866 - - - - - - - - - 0.866 sodium channel epithelial 1 gamma subunit [Source:HGNC Symbol;Acc:HGNC:10602]
50. MAP3K8 ENSGALG00000007356 188 0.865 - - 0.865 - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
51. GMPR ENSGALG00000012705 30 0.863 - - - - - - - - - 0.863 guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
52. ABCC10 2213 0.862 - - 0.862 - - - - - - - ATP binding cassette subfamily C member 10, transcript variant X10
53. EDN2 ENSGALG00000000667 219 0.861 - - - - - - - - - 0.861 endothelin 2 [Source:NCBI gene;Acc:419559]
54. MATN2 44 0.859 - - - - - - - - - 0.859 matrilin 2, transcript variant X9
55. PLEKHJ1 ENSGALG00000000835 55 0.858 - - - - - - - 0.858 - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
56. ABLIM1 ENSGALG00000009048 19 0.856 - - - - - - - - - 0.856 actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
57. SNAPC4 ENSGALG00000044726 36 0.856 - - - - - - - - - 0.856 small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
58. PPIL3 ENSGALG00000008228 150 0.855 - - - - - - - 0.855 - - peptidylprolyl isomerase like 3 [Source:NCBI gene;Acc:424075]
59. CYP2U1 ENSGALG00000027908 13 0.852 - - - - - - - - - 0.852 cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
60. MYL2 ENSGALG00000004582 2245 0.852 - - - - - - - - - 0.852 myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
61. SLC25A19 ENSGALG00000008011 68 0.852 - - - - - - - 0.852 - - solute carrier family 25 member 19 [Source:HGNC Symbol;Acc:HGNC:14409]
62. TMEM51 ENSGALG00000035819 83 0.851 - - - - - - - - - 0.851 transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]
63. POLL ENSGALG00000007753 2032 0.85 - - - - - - - - - 0.850 DNA polymerase lambda [Source:HGNC Symbol;Acc:HGNC:9184]
64. SERINC5 ENSGALG00000014798 52 0.849 - - - - - - - - - 0.849 serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
65. HLCS ENSGALG00000016047 30 0.848 - - - - - - - - - 0.848 holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
66. PGAM1 ENSGALG00000007606 384 0.846 - - - - - - - 0.846 - - phosphoglycerate mutase 1 [Source:NCBI gene;Acc:428969]
67. MICAL1 ENSGALG00000032190 134 0.845 - - 0.845 - - - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:NCBI gene;Acc:429474]
68. ENSGALG00000007210 ENSGALG00000007210 2203 0.842 - - - - - - - - - 0.842
69. STXBP3 ENSGALG00000002001 1740 0.841 - - 0.841 - - - - - - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
70. ENSGALG00000011942 ENSGALG00000011942 175 0.839 - - 0.839 - - - - - - -
71. ACAD8 ENSGALG00000001557 2562 0.839 - - - - - - - - - 0.839 acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
72. RC3H1 ENSGALG00000004587 40 0.838 - - - - - - - - - 0.838 ring finger and CCCH-type domains 1 [Source:HGNC Symbol;Acc:HGNC:29434]
73. ETS2 ENSGALG00000016059 271 0.837 - - - - - - - - - 0.837 ETS proto-oncogene 2, transcription factor [Source:NCBI gene;Acc:396250]
74. SRPX2 ENSGALG00000006796 32 0.832 - - - - - - - 0.832 - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
75. ENSGALG00000023773 ENSGALG00000023773 77 0.832 - - - - - - - - - 0.832
76. CABP2 ENSGALG00000037497 329 0.831 - - 0.831 - - - - - - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
77. CUTA ENSGALG00000001620 76 0.831 - - - - - - - 0.831 - - cutA divalent cation tolerance homolog
78. SNORD2 SNORD2 51 0.831 - - - - - - - - - 0.831
79. ATG12 ENSGALG00000002345 3607 0.83 - - 0.830 - - - - - - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
80. NTN4 ENSGALG00000011406 72 0.83 - - - - - - - 0.830 - - netrin 4 [Source:HGNC Symbol;Acc:HGNC:13658]
81. ENSGALG00000019793 ENSGALG00000019793 198 0.829 - - - - - - - - - 0.829
82. TNK2 ENSGALG00000027983 144 0.827 - - - - - - - - - 0.827 tyrosine kinase non receptor 2, transcript variant X7
83. LRRCC1 ENSGALG00000039499 480 0.824 - - - - - - - - - 0.824 leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
84. C1H11ORF70 ENSGALG00000017189 395 0.822 - - 0.822 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
85. PINLYP ENSGALG00000026884 23 0.82 - - - - - - - 0.820 - - phospholipase A2 inhibitor and LY6/PLAUR domain containing
86. EXT2 ENSGALG00000031542 58 0.818 - - - - - - - - - 0.818 exostosin glycosyltransferase 2 [Source:NCBI gene;Acc:425859]
87. ACOT9 ENSGALG00000016351 330 0.818 - - - - - - - 0.818 - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
88. SRP54 ENSGALG00000023135 372 0.816 - - - - - - - - - 0.816 signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
89. YWHAG ENSGALG00000017358 203 0.816 - - - - - - - 0.816 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:NCBI gene;Acc:427820]
90. TCEANC2 ENSGALG00000010749 162 0.811 - - - - - - - - - 0.811 transcription elongation factor A N-terminal and central domain containing 2 [Source:NCBI gene;Acc:424657]
91. DUSP1 ENSGALG00000040360 2129 0.81 - - 0.810 - - - - - - - dual specificity phosphatase 1 [Source:NCBI gene;Acc:374192]
92. PIGZ ENSGALG00000026294 99 0.81 - - - - - - - - - 0.810 phosphatidylinositol glycan anchor biosynthesis class Z, transcript variant X2
93. STEAP3 ENSGALG00000012117 403 0.807 - - - - - - - - - 0.807 STEAP3 metalloreductase [Source:HGNC Symbol;Acc:HGNC:24592]
94. ABHD14A 174 0.806 - - - - - - - - - 0.806 abhydrolase domain containing 14A
95. IQCG ENSGALG00000007607 17 0.805 - - - - - - - - - 0.805 IQ motif containing G [Source:HGNC Symbol;Acc:HGNC:25251]
96. SUGP2 ENSGALG00000003047 227 0.804 - - - - - - - 0.804 - - SURP and G-patch domain containing 2 [Source:NCBI gene;Acc:420113]
97. AAGAB ENSGALG00000007887 142 0.804 - - - - - - - - - 0.804 alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
98. SDCCAG8 ENSGALG00000010713 311 0.804 - - - - - - - - - 0.804 serologically defined colon cancer antigen 8, transcript variant X5
99. ANO5 ENSGALG00000003748 3959 0.803 - - 0.803 - - - - - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
100. MAB21L2 4841 0.802 - - 0.802 - - - - - - - mab-21-like 2 (C. elegans)

There are 216 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA