Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HIF1A

Gene Name Gene ID Reads Annotation
HIF1A ENSGALG00000011870 9768 hypoxia inducible factor 1 subunit alpha [Source:NCBI gene;Acc:374177]











Genes with expression patterns similar to HIF1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HIF1A ENSGALG00000011870 9768 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hypoxia inducible factor 1 subunit alpha [Source:NCBI gene;Acc:374177]
2. CHCHD1 ENSGALG00000028809 9955 1.587 - - - - - - 0.864 0.723 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
3. ZFR ENSGALG00000003235 8466 1.572 - - - - - - 0.755 0.817 - - zinc finger RNA binding protein, transcript variant X3
4. PPP2R5A ENSGALG00000009828 10309 1.554 - - - - - - 0.744 0.810 - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
5. RRAS2 ENSGALG00000005998 6467 1.553 - - - - - - 0.734 0.819 - - RAS related 2 [Source:NCBI gene;Acc:423062]
6. C15ORF23 C15ORF23 14264 1.548 - - - - - - 0.844 0.704 - -
7. TRIM33 ENSGALG00000001976 7404 1.529 - - - - - - 0.777 0.752 - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
8. MED4 ENSGALG00000016995 3309 1.525 - - - - - - 0.712 0.813 - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
9. SLC25A17 ENSGALG00000012013 13948 1.509 - - - - - - 0.709 0.800 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
10. SNX4 ENSGALG00000012052 11634 1.506 - - - - - - 0.712 0.794 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
11. UBE2V2 ENSGALG00000028133 7044 1.417 - - - - - - 0.704 0.713 - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
12. SCHIP1 ENSGALG00000039468 5912 0.89 - - - - - - 0.890 - - - schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]
13. VPS36 ENSGALG00000017026 3658 0.866 - - - - - - 0.866 - - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
14. OAT ENSGALG00000031158 10249 0.862 - - - - - - 0.862 - - - ornithine aminotransferase [Source:NCBI gene;Acc:426430]
15. APLP2 ENSGALG00000001250 22253 0.861 - - - - - - 0.861 - - - amyloid beta precursor like protein 2 [Source:NCBI gene;Acc:419727]
16. RAE1 ENSGALG00000007653 8930 0.857 - - - - - - 0.857 - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
17. NAA35 ENSGALG00000012598 6409 0.845 - - - - - - 0.845 - - - N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:NCBI gene;Acc:427461]
18. PRPF6 ENSGALG00000006001 8572 0.844 - - - - - - 0.844 - - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
19. SEC24C ENSGALG00000005181 11132 0.844 - - - - - - - 0.844 - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
20. ZCCHC6 ENSGALG00000012607 3655 0.841 - - - - - - 0.841 - - - zinc finger CCHC-type containing 6 [Source:NCBI gene;Acc:100857368]
21. ADIPOR2 ENSGALG00000035533 6523 0.841 - - - - - - - 0.841 - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
22. XPO1 ENSGALG00000029476 9526 0.839 - - - - - - 0.839 - - - exportin 1 [Source:NCBI gene;Acc:421192]
23. APRT ENSGALG00000031000 7535 0.838 - - - - - - 0.838 - - - adenine phosphoribosyltransferase [Source:NCBI gene;Acc:100857155]
24. SF3A2 ENSGALG00000021679 12580 0.831 - - - - - - - 0.831 - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
25. CPSF6 ENSGALG00000019355 7634 0.83 - - - - - - 0.830 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
26. AKAP9 ENSGALG00000040724 7446 0.829 - - - - - - - 0.829 - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
27. SEC22B ENSGALG00000039704 16080 0.829 - - - - - - 0.829 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
28. HSF2 ENSGALG00000038420 5259 0.828 - - - - - - 0.828 - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
29. MPRIP ENSGALG00000004798 6700 0.825 - - - - - - 0.825 - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
30. DYNC1H1 ENSGALG00000011330 16400 0.823 - - - - - - 0.823 - - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
31. UPF3B ENSGALG00000008618 12350 0.823 - - - - - - 0.823 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
32. CETN1 ENSGALG00000026741 7243 0.823 - - - - - - 0.823 - - - centrin 1 [Source:NCBI gene;Acc:422668]
33. WDR70 ENSGALG00000003708 5835 0.821 - - - - - - 0.821 - - - WD repeat domain 70 [Source:NCBI gene;Acc:427444]
34. gga-mir-7476 gga-mir-7476 20209 0.821 - - - - - - - 0.821 - -
35. NXN 20202 0.82 - - - - - - 0.820 - - - nucleoredoxin, transcript variant X1
36. GMNN ENSGALG00000013626 15838 0.82 - - - - - - 0.820 - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
37. CEP70 ENSGALG00000012087 7992 0.82 - - - - - - 0.820 - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
38. RNF8 ENSGALG00000023256 5495 0.814 - - - - - - - 0.814 - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
39. NDUFS3 ENSGALG00000008084 12471 0.813 - - - - - - - 0.813 - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
40. TFDP1 ENSGALG00000016823 17019 0.812 - - - - - - 0.812 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
41. MCM3 ENSGALG00000016676 16934 0.812 - - - - - - - 0.812 - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
42. PSMD10 ENSGALG00000008287 11380 0.81 - - - - - - 0.810 - - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
43. CYFIP1 ENSGALG00000016736 6701 0.809 - - - - - - 0.809 - - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
44. TMLHE ENSGALG00000007443 3619 0.809 - - - - - - - 0.809 - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
45. RRP9 ENSGALG00000043359 9747 0.809 - - - - - - 0.809 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
46. TPD52L2 ENSGALG00000004683 13624 0.809 - - - - - - 0.809 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
47. MRPL54 ENSGALG00000027611 39450 0.809 - - - - - - 0.809 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
48. NR2C1 ENSGALG00000011327 5109 0.804 - - - - - - - 0.804 - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
49. SCFD1 ENSGALG00000009916 5756 0.803 - - - - - - 0.803 - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
50. TRAF7 ENSGALG00000005767 4615 0.803 - - - - - - - 0.803 - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
51. SRSF6 ENSGALG00000000990 12424 0.802 - - - - - - 0.802 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
52. RPL7L1 ENSGALG00000011974 20292 0.802 - - - - - - 0.802 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
53. ARHGAP19 ENSGALG00000007609 3655 0.801 - - - - - - 0.801 - - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
54. TRAPPC4 ENSGALG00000007707 3568 0.801 - - - - - - 0.801 - - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
55. FBXO3 ENSGALG00000034029 15089 0.8 - - - - - - - 0.800 - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
56. VPS26A ENSGALG00000004174 9198 0.798 - - - - - - 0.798 - - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
57. HAUS1 ENSGALG00000040397 6195 0.797 - - - - - - 0.797 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
58. CACYBP ENSGALG00000004554 7320 0.796 - - - - - - 0.796 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
59. ENSGALG00000007035 ENSGALG00000007035 8473 0.795 - - - - - - - 0.795 - -
60. TXN2 ENSGALG00000012532 12518 0.795 - - - - - - - 0.795 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
61. DTYMK ENSGALG00000006305 11736 0.795 - - - - - - 0.795 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
62. SURF6 ENSGALG00000038413 11178 0.795 - - - - - - 0.795 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
63. ARPC1A ENSGALG00000004693 11583 0.793 - - - - - - 0.793 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
64. PSMD7 ENSGALG00000000707 26350 0.793 - - - - - - - 0.793 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
65. PPM1D ENSGALG00000035610 6530 0.792 - - - - - - 0.792 - - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
66. UFD1L 12964 0.792 - - - - - - 0.792 - - - ubiquitin fusion degradation 1 like (yeast)
67. C7orf50 ENSGALG00000004055 5786 0.792 - - - - - - - 0.792 - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
68. COPS2 ENSGALG00000000404 8980 0.792 - - - - - - 0.792 - - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
69. PTP4A2 ENSGALG00000003265 24826 0.791 - - - - - - 0.791 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
70. IPO9 ENSGALG00000000397 9263 0.791 - - - - - - 0.791 - - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
71. LYPLA1 ENSGALG00000040421 14720 0.789 - - - - - - 0.789 - - - lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
72. ORC4 ENSGALG00000012448 8405 0.789 - - - - - - 0.789 - - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
73. PDZD11 ENSGALG00000004198 11484 0.788 - - - - - - 0.788 - - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
74. PAM16 9684 0.787 - - - - - - 0.787 - - - presequence translocase associated motor 16 homolog, transcript variant X2
75. PNRC2 ENSGALG00000004122 19228 0.787 - - - - - - 0.787 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
76. HSCB ENSGALG00000005706 12953 0.787 - - - - - - 0.787 - - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
77. TIMM17A ENSGALG00000000086 19205 0.786 - - - - - - 0.786 - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:NCBI gene;Acc:421147]
78. CPSF2 ENSGALG00000010783 5236 0.786 - - - - - - 0.786 - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
79. GMPPA ENSGALG00000002417 10383 0.786 - - - - - - 0.786 - - - GDP-mannose pyrophosphorylase A, transcript variant X2
80. IK ENSGALG00000037172 12100 0.786 - - - - - - 0.786 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
81. FEN1 ENSGALG00000033781 16551 0.786 - - - - - - 0.786 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
82. MYST2 MYST2 8078 0.785 - - - - - - - 0.785 - -
83. MCTS1 ENSGALG00000008517 27514 0.785 - - - - - - 0.785 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
84. KDM5B ENSGALG00000038948 50645 0.784 - - - - - - 0.784 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
85. ARF6 ENSGALG00000026944 22014 0.784 - - - - - - 0.784 - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
86. FNDC3AL ENSGALG00000004169 4980 0.783 - - - - - - - 0.783 - - fibronectin type III domain containing 3A-like, transcript variant X3
87. GLRX5 ENSGALG00000011079 28943 0.782 - - - - - - 0.782 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
88. GGCT ENSGALG00000030552 3446 0.78 - - - - - - 0.780 - - - gamma-glutamylcyclotransferase
89. COPA ENSGALG00000009153 11618 0.779 - - - - - - 0.779 - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
90. SRGAP1 ENSGALG00000009825 6753 0.779 - - - - - - 0.779 - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
91. MOSPD1 ENSGALG00000006132 8503 0.779 - - - - - - 0.779 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
92. FBXW11 ENSGALG00000002229 5805 0.779 - - - - - - 0.779 - - - F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
93. UBE2E3 ENSGALG00000020793 9517 0.778 - - - - - - 0.778 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
94. QTRTD1 QTRTD1 10765 0.778 - - - - - - - 0.778 - -
95. RNF185 ENSGALG00000006960 5428 0.778 - - - - - - 0.778 - - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
96. MTHFD1 ENSGALG00000011797 11001 0.778 - - - - - - 0.778 - - - methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]
97. SLC25A3 ENSGALG00000011514 62606 0.778 - - - - - - 0.778 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
98. MED23 ENSGALG00000040607 5105 0.778 - - - - - - 0.778 - - - mediator complex subunit 23 [Source:HGNC Symbol;Acc:HGNC:2372]
99. LEPROT ENSGALG00000011047 7132 0.777 - - - - - - 0.777 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
100. GNL3 ENSGALG00000001613 10911 0.777 - - - - - - 0.777 - - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA