Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HERPUD2

Gene Name Gene ID Reads Annotation
HERPUD2 ENSGALG00000040364 6073 HERPUD family member 2 [Source:HGNC Symbol;Acc:HGNC:21915]











Genes with expression patterns similar to HERPUD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HERPUD2 ENSGALG00000040364 6073 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HERPUD family member 2 [Source:HGNC Symbol;Acc:HGNC:21915]
2. CTSL2 CTSL2 7966 1.522 - - - - - - 0.771 0.751 - -
3. R3HDM1 ENSGALG00000012246 6580 1.49 - - - - - - 0.753 0.737 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
4. NUP85 ENSGALG00000007974 21249 1.486 - - - - - - 0.780 0.706 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
5. C5H15ORF41 C5H15ORF41 2114 1.475 - - - - - - 0.721 0.754 - -
6. CCNDBP1 ENSGALG00000004837 11520 1.468 - - - - - - 0.766 0.702 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
7. DCPS ENSGALG00000031143 10191 1.453 - - - - - - 0.718 0.735 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
8. CLN8 ENSGALG00000039606 4209 1.428 - - - - - - 0.717 0.711 - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
9. TIPRL ENSGALG00000015246 7875 1.406 - - - - - - 0.702 0.704 - - TOR signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:30231]
10. METTL23 ENSGALG00000001790 7906 0.847 - - - - - - 0.847 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
11. FKBP7 ENSGALG00000009149 6742 0.843 - - - - - - - 0.843 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
12. RCN2 ENSGALG00000039284 17848 0.839 - - - - - - - 0.839 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
13. B4GALT6 ENSGALG00000015151 2770 0.839 - - - - - - - 0.839 - - beta-1,4-galactosyltransferase 6 [Source:NCBI gene;Acc:421092]
14. CD151 ENSGALG00000006856 5581 0.838 - - - - - - 0.838 - - - CD151 molecule (Raph blood group) [Source:NCBI gene;Acc:423105]
15. SMDT1 ENSGALG00000011897 9360 0.832 - - - - - - 0.832 - - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
16. ATL2 ENSGALG00000037289 7926 0.827 - - - - - - - 0.827 - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
17. UFL1 ENSGALG00000015580 3845 0.827 - - - - - - - 0.827 - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
18. LCLAT1 ENSGALG00000009056 5207 0.827 - - - - - - - 0.827 - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
19. NPC2 ENSGALG00000010237 11180 0.821 - - - - - - - 0.821 - - Niemann-Pick disease, type C2 [Source:NCBI gene;Acc:423353]
20. BNIP3L ENSGALG00000043405 10316 0.821 - - - - - - - 0.821 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
21. MOB3A ENSGALG00000031729 9690 0.819 - - - - - - - 0.819 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
22. CALCOCO2 ENSGALG00000001525 3121 0.818 - - - - - - - 0.818 - - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
23. SLC30A6 ENSGALG00000010618 3197 0.811 - - - - - - - 0.811 - - solute carrier family 30 member 6 [Source:NCBI gene;Acc:421480]
24. C1H12ORF23 C1H12ORF23 13234 0.804 - - - - - - 0.804 - - -
25. CCDC47 ENSGALG00000000564 6584 0.803 - - - - - - - 0.803 - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
26. SMC4 ENSGALG00000009553 15715 0.802 - - - - - - 0.802 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
27. ARFIP1 ENSGALG00000041361 7351 0.801 - - - - - - - 0.801 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
28. GPR162 ENSGALG00000022926 7181 0.801 - - - - - - - 0.801 - - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
29. SH3BGRL ENSGALG00000007128 18708 0.8 - - - - - - - 0.800 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
30. TBRG4 ENSGALG00000038102 9269 0.8 - - - - - - - 0.800 - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
31. PGAM5 ENSGALG00000002137 7700 0.799 - - - - - - 0.799 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
32. GTF2IRD1 ENSGALG00000001263 14716 0.797 - - - - - - 0.797 - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
33. TUBB2C TUBB2C 44249 0.794 - - - - - - 0.794 - - -
34. AZIN1 ENSGALG00000029295 11085 0.793 - - - - - - - 0.793 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
35. CHMP4B ENSGALG00000002095 17422 0.792 - - - - - - - 0.792 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
36. PSMD3 ENSGALG00000033162 25615 0.792 - - - - - - 0.792 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
37. SPINZ SPINZ 10341 0.792 - - - - - - 0.792 - - -
38. CTBP1 ENSGALG00000039942 9383 0.791 - - - - - - 0.791 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
39. CCNH ENSGALG00000015641 8051 0.791 - - - - - - 0.791 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
40. RABGGTB ENSGALG00000011388 11654 0.79 - - - - - - 0.790 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
41. HARS ENSGALG00000035080 11602 0.79 - - - - - - 0.790 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
42. RSL1D1 ENSGALG00000033690 13638 0.79 - - - - - - 0.790 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
43. ENSGALG00000009044 ENSGALG00000009044 14492 0.788 - - - - - - 0.788 - - -
44. gga-mir-1564 ENSGALG00000043133 4645 0.787 - - - - - - - 0.787 - - gga-mir-1564 [Source:miRBase;Acc:MI0007289]
45. PRDX6 ENSGALG00000003053 17928 0.787 - - - - - - - 0.787 - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
46. CPSF3L CPSF3L 3584 0.787 - - - - - - - 0.787 - -
47. ERLIN2 ENSGALG00000003092 18251 0.786 - - - - - - - 0.786 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
48. ENSGALG00000013067 ENSGALG00000013067 10741 0.785 - - - - - - - 0.785 - -
49. TTYH2 ENSGALG00000026940 15628 0.784 - - - - - - 0.784 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
50. AMFR ENSGALG00000003107 6560 0.782 - - - - - - - 0.782 - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
51. CHTF8 ENSGALG00000000632 7230 0.782 - - - - - - 0.782 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
52. FANCL ENSGALG00000030022 7423 0.782 - - - - - - 0.782 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
53. NDUFS1 ENSGALG00000008606 7898 0.782 - - - - - - 0.782 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
54. FADS1 ENSGALG00000007127 5231 0.78 - - - - - - - 0.780 - - fatty acid desaturase 1
55. PERP2 ENSGALG00000027207 1240 0.78 - - - - - - - 0.780 - - PERP2, TP53 apoptosis effector [Source:NCBI gene;Acc:421682]
56. ENSGALG00000004283 ENSGALG00000004283 4771 0.779 - - - - - - - 0.779 - -
57. TSEN15 ENSGALG00000004782 2520 0.779 - - - - - - - 0.779 - - tRNA splicing endonuclease subunit 15 [Source:HGNC Symbol;Acc:HGNC:16791]
58. ST5 6869 0.779 - - - - - - 0.779 - - - suppression of tumorigenicity 5, transcript variant X1
59. COX17 ENSGALG00000014981 5646 0.778 - - - - - - - 0.778 - - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
60. TRANK1 ENSGALG00000037629 2268 0.778 - - - - - - 0.778 - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
61. GXYLT1 ENSGALG00000009532 5682 0.777 - - - - - - 0.777 - - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
62. CUL3 ENSGALG00000005108 9571 0.777 - - - - - - 0.777 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
63. ALDH7A1 ENSGALG00000008229 5891 0.776 - - - - - - 0.776 - - - aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
64. CENPW ENSGALG00000027454 7517 0.776 - - - - - - 0.776 - - - centromere protein W [Source:NCBI gene;Acc:421716]
65. UCHL3 ENSGALG00000016921 16208 0.775 - - - - - - 0.775 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
66. COMMD10 ENSGALG00000002308 7442 0.775 - - - - - - 0.775 - - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
67. FBXO38 ENSGALG00000038627 2658 0.775 - - - - - - - 0.775 - - F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
68. YWHAZ ENSGALG00000031387 84985 0.775 - - - - - - 0.775 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
69. TNRC6A ENSGALG00000006068 9166 0.773 - - - - - - 0.773 - - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
70. C4orf27 C4orf27 16724 0.773 - - - - - - 0.773 - - -
71. HMGB2 ENSGALG00000010745 89235 0.772 - - - - - - 0.772 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
72. C11H16ORF80 C11H16ORF80 18673 0.772 - - - - - - 0.772 - - -
73. GNG2 ENSGALG00000027629 9404 0.771 - - - - - - 0.771 - - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
74. DERA ENSGALG00000013095 4135 0.77 - - - - - - - 0.770 - - deoxyribose-phosphate aldolase [Source:NCBI gene;Acc:418176]
75. DKC1 ENSGALG00000005054 30350 0.769 - - - - - - 0.769 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
76. PAPSS1 ENSGALG00000010542 5631 0.769 - - - - - - - 0.769 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
77. PLK1 ENSGALG00000006110 12892 0.769 - - - - - - - 0.769 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
78. HDDC2 ENSGALG00000014841 7674 0.768 - - - - - - 0.768 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
79. EFTUD1 EFTUD1 3455 0.768 - - - - - - 0.768 - - -
80. APP ENSGALG00000015770 9438 0.768 - - - - - - - 0.768 - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
81. FAM160B1 ENSGALG00000031404 3153 0.768 - - - - - - 0.768 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
82. VATB VATB 13756 0.767 - - - - - - 0.767 - - -
83. GLO1 ENSGALG00000010127 31662 0.767 - - - - - - 0.767 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
84. MRPS2 ENSGALG00000026303 12124 0.766 - - - - - - 0.766 - - - mitochondrial ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:14495]
85. GMPPB ENSGALG00000002500 9454 0.766 - - - - - - 0.766 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
86. NCDN ENSGALG00000002408 6180 0.766 - - - - - - 0.766 - - - neurochondrin [Source:NCBI gene;Acc:419633]
87. ENSA ENSGALG00000037480 1619 0.765 - - - - - - 0.765 - - - endosulfine alpha [Source:NCBI gene;Acc:425073]
88. TMEM41A ENSGALG00000006649 3309 0.765 - - - - - - - 0.765 - - transmembrane protein 41A [Source:NCBI gene;Acc:424875]
89. NAA35 ENSGALG00000012598 6409 0.765 - - - - - - - 0.765 - - N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:NCBI gene;Acc:427461]
90. PEX3 ENSGALG00000013777 3158 0.764 - - - - - - - 0.764 - - peroxisomal biogenesis factor 3
91. REL ENSGALG00000007845 689 0.764 - - - - - - - 0.764 - - REL proto-oncogene, NF-kB subunit [Source:NCBI gene;Acc:396500]
92. TOR1AIP1 ENSGALG00000029238 5843 0.764 - - - - - - 0.764 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
93. RB1CC1 ENSGALG00000015259 4211 0.764 - - - - - - - 0.764 - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
94. MAFF ENSGALG00000012277 3392 0.764 - - - - - - 0.764 - - - MAF bZIP transcription factor F [Source:NCBI gene;Acc:395519]
95. PCGF6 ENSGALG00000008230 1690 0.764 - - - - - - 0.764 - - - polycomb group ring finger 6 [Source:HGNC Symbol;Acc:HGNC:21156]
96. ERBB2IP ERBB2IP 5800 0.763 - - - - - - 0.763 - - -
97. URM1 ENSGALG00000004971 17880 0.763 - - - - - - - 0.763 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
98. RAB5C ENSGALG00000003359 5597 0.762 - - - - - - - 0.762 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
99. FAM207A ENSGALG00000007513 8748 0.762 - - - - - - - 0.762 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
100. DNMT3A ENSGALG00000041454 9607 0.761 - - - - - - - 0.761 - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]

There are 329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA