Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HERC2

Gene Name Gene ID Reads Annotation
HERC2 ENSGALG00000016739 9900 HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]











Genes with expression patterns similar to HERC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HERC2 ENSGALG00000016739 9900 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
2. TMEM183A ENSGALG00000000223 6915 2.334 - - - 0.733 - - 0.789 0.812 - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
3. NUDT4 ENSGALG00000011285 2998 2.316 - - 0.715 0.870 - - 0.731 - - - nudix hydrolase 4, transcript variant X5
4. ABHD17B ENSGALG00000015139 2805 2.234 - - 0.729 0.778 - - 0.727 - - - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
5. SLC27A4 ENSGALG00000004965 3278 1.799 - - - 0.841 - - - 0.958 - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
6. WDR43 ENSGALG00000032529 12235 1.702 - - - - - - 0.864 0.838 - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
7. MRPS30 ENSGALG00000014874 3416 1.693 - - - 0.868 - - 0.825 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
8. BAG5 ENSGALG00000031062 4498 1.688 - - - 0.858 - - 0.830 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
9. GTF2B ENSGALG00000006205 6950 1.683 - - - 0.774 - - - 0.909 - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
10. WDR53 ENSGALG00000006395 4938 1.679 - - - - - - 0.772 0.907 - - WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
11. C1H12ORF23 C1H12ORF23 13234 1.671 - - - - - - 0.770 0.901 - -
12. PPFIA1 ENSGALG00000035774 5258 1.668 - - - 0.841 - - 0.827 - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
13. CZH9ORF100 CZH9ORF100 4268 1.653 - - - - - - 0.746 0.907 - -
14. GLRX3 ENSGALG00000010464 22578 1.625 - - - 0.806 - - 0.819 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
15. MRPL40 ENSGALG00000001587 20893 1.619 - - - 0.863 - - 0.756 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
16. AKT1 ENSGALG00000011620 4089 1.611 - - - 0.843 - - 0.768 - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
17. PFKL ENSGALG00000006543 4361 1.598 - - - 0.830 - - 0.768 - - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
18. PAXIP1 ENSGALG00000036064 3120 1.593 - - - 0.811 - - 0.782 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
19. EIF2B3 ENSGALG00000010140 7992 1.583 - - - - - - 0.783 0.800 - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
20. AAMP ENSGALG00000011445 2528 1.581 - - - 0.756 - - 0.825 - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
21. ASUN ASUN 17129 1.556 - - - 0.730 - - 0.826 - - -
22. TGS1 ENSGALG00000015340 5897 1.543 - - - 0.841 - - 0.702 - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
23. GTF2F2 ENSGALG00000016974 7524 1.534 - - - 0.759 - - 0.775 - - - general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
24. VPS35 ENSGALG00000004375 8059 1.532 - - - 0.764 - - 0.768 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
25. EIF3J ENSGALG00000008187 43570 1.526 - - - 0.734 - - - 0.792 - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
26. LRRFIP2 ENSGALG00000033102 8250 1.522 - - - 0.732 - - 0.790 - - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
27. CIRH1A CIRH1A 6975 1.518 - - - - - - 0.757 0.761 - -
28. ZBTB16 ENSGALG00000038540 5544 1.504 - - - 0.779 - - 0.725 - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
29. ATR ENSGALG00000002663 4626 1.503 - - - 0.733 - - 0.770 - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
30. MRPL55 5995 1.502 - - - 0.775 - - 0.727 - - - mitochondrial ribosomal protein L55
31. CBWD1 ENSGALG00000010147 2765 1.495 - - - 0.759 - - 0.736 - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
32. FAM133B 9239 1.488 - - - 0.786 - - 0.702 - - - family with sequence similarity 133 member B
33. AGPAT3 ENSGALG00000031932 6903 1.48 - - - - - - 0.739 0.741 - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
34. SLC25A3 ENSGALG00000011514 62606 1.477 - - - 0.769 - - 0.708 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
35. NF2 ENSGALG00000008073 4597 1.474 - - - 0.718 - - 0.756 - - - neurofibromin 2 [Source:NCBI gene;Acc:395158]
36. GPHN ENSGALG00000009587 3045 1.473 - - 0.745 - - - 0.728 - - - gephyrin [Source:NCBI gene;Acc:428878]
37. ST5 6869 1.472 - - - 0.720 - - 0.752 - - - suppression of tumorigenicity 5, transcript variant X1
38. METTL21A ENSGALG00000008493 3188 1.472 - - - 0.770 - - 0.702 - - - methyltransferase like 21A [Source:NCBI gene;Acc:424094]
39. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 1.464 - - - 0.732 - - 0.732 - - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
40. ARPC1A ENSGALG00000004693 11583 1.459 - - - 0.747 - - 0.712 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
41. CDC42BPB ENSGALG00000011432 8220 1.458 - - - 0.747 - - 0.711 - - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
42. WDR45B ENSGALG00000001563 5870 1.452 - - - 0.713 - - 0.739 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
43. CLK1 ENSGALG00000028438 3550 1.44 - - - 0.735 - - 0.705 - - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
44. SHMT1 ENSGALG00000005046 1430 1.425 - - - 0.709 - - 0.716 - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
45. MIB1 ENSGALG00000014974 3583 1.423 - - - 0.705 - - 0.718 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
46. TMEM251 ENSGALG00000017387 3423 1.42 - - 0.706 0.714 - - - - - - transmembrane protein 251 [Source:NCBI gene;Acc:423422]
47. AKR1B10L3 ENSGALG00000019284 5869 1.418 - - - 0.702 - - 0.716 - - - aldo-keto reductase family 1 member B10-like 3
48. THG1L ENSGALG00000003722 7497 0.957 - - - - - - - 0.957 - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
49. CCDC93 ENSGALG00000012129 2405 0.956 - - - - - - - 0.956 - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
50. PSMC3 ENSGALG00000008108 22922 0.918 - - - - - - 0.918 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
51. PPIF ENSGALG00000004809 5586 0.91 - - - - - - - 0.910 - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
52. VBP1 VBP1 14482 0.907 - - - - - - 0.907 - - -
53. KCTD2 ENSGALG00000007934 15085 0.906 - - - - - - - 0.906 - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
54. ALDH4A1 ENSGALG00000042184 9432 0.897 - - - - - - - 0.897 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
55. HSPA14 ENSGALG00000035201 7372 0.893 - - - - - - - 0.893 - - heat shock protein family A (Hsp70) member 14
56. CCDC12 ENSGALG00000005487 8190 0.893 - - - - - - - 0.893 - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
57. USP20 ENSGALG00000041104 3186 0.893 - - - - - - - 0.893 - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
58. LSM5 ENSGALG00000041625 22307 0.892 - - - - - - 0.892 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
59. EDEM2 ENSGALG00000003128 3338 0.892 - - - - - - - 0.892 - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
60. KIAA1432 KIAA1432 1792 0.891 - - - 0.891 - - - - - -
61. CDCA2 ENSGALG00000045842 2236 0.891 - - - - - - - 0.891 - - cell division cycle associated 2, transcript variant X3
62. FOPNL ENSGALG00000006532 2922 0.891 - - - - - - - 0.891 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
63. RASSF2 ENSGALG00000030432 4822 0.891 - - - - - - - 0.891 - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
64. ROR1 ENSGALG00000011019 2155 0.891 - - - - - - - 0.891 - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
65. TWISTNB ENSGALG00000010863 7563 0.891 - - - - - - - 0.891 - - TWIST neighbor [Source:NCBI gene;Acc:420603]
66. TRABD ENSGALG00000030705 6577 0.891 - - - - - - - 0.891 - - TraB domain containing [Source:NCBI gene;Acc:417746]
67. ENSGALG00000027854 ENSGALG00000027854 5007 0.891 - - - - - - - 0.891 - -
68. XPNPEP3 ENSGALG00000012003 2253 0.891 - - - - - - - 0.891 - - X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
69. XRCC2 ENSGALG00000026865 2214 0.89 - - - - - - - 0.890 - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
70. SORD ENSGALG00000031408 2119 0.89 - - - - - - - 0.890 - - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
71. RNF2 ENSGALG00000037219 2299 0.89 - - - - - - - 0.890 - - ring finger protein 2 [Source:HGNC Symbol;Acc:HGNC:10061]
72. UBE4A ENSGALG00000031134 5851 0.89 - - - - - - - 0.890 - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
73. RAD18 ENSGALG00000008368 7214 0.89 - - - - - - - 0.890 - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
74. EMCN EMCN 2637 0.889 - - - - - - - 0.889 - -
75. GPR180 ENSGALG00000016897 1545 0.889 - - - - - - - 0.889 - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
76. ARL6IP4 ENSGALG00000003682 2467 0.889 - - - - - - - 0.889 - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
77. MPP7 ENSGALG00000007408 2485 0.889 - - - - - - - 0.889 - - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
78. ENSGALG00000023314 ENSGALG00000023314 6331 0.889 - - - - - - - 0.889 - -
79. MAMLD1 ENSGALG00000009098 1231 0.888 - - - - - - - 0.888 - - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
80. H1F0 ENSGALG00000044240 1206 0.888 - - - - - - - 0.888 - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
81. MYL2 ENSGALG00000004582 2245 0.888 - - - - - - - 0.888 - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
82. NUPL1 NUPL1 8197 0.888 - - - - - - 0.888 - - -
83. CDC26 ENSGALG00000026095 3491 0.888 - - - - - - - 0.888 - - cell division cycle 26 [Source:NCBI gene;Acc:417269]
84. ODF2 ENSGALG00000004767 3972 0.888 - - - - - - - 0.888 - - outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
85. RNF19A ENSGALG00000038772 380 0.888 - - - - - - - 0.888 - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
86. PHKG1 ENSGALG00000002485 15214 0.888 - - - - - - - 0.888 - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
87. NARG2 NARG2 2294 0.888 - - - - - - - 0.888 - -
88. OGG1 ENSGALG00000006651 1320 0.888 - - - - - - - 0.888 - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
89. SEC22B ENSGALG00000039704 16080 0.887 - - - - - - - 0.887 - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
90. XRN2 ENSGALG00000008372 22164 0.885 - - - - - - 0.885 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
91. ITPKB ENSGALG00000009068 324 0.884 - - - 0.884 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
92. MTFR1 ENSGALG00000038385 9419 0.883 - - - - - - - 0.883 - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
93. RBM27 ENSGALG00000007516 3909 0.883 - - - - - - - 0.883 - - RNA binding motif protein 27, transcript variant X3
94. GFPT2 ENSGALG00000039705 562 0.879 - - - 0.879 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
95. ASRGL1 ENSGALG00000015949 403 0.879 - - - 0.879 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
96. TXNDC17 ENSGALG00000027950 45004 0.879 - - - - - - 0.879 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
97. FRRS1 ENSGALG00000005418 332 0.879 - - - 0.879 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
98. NEK6 ENSGALG00000001118 20333 0.878 - - - - - - 0.878 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
99. TSPO2 ENSGALG00000003212 5141 0.878 - - - - - - - 0.878 - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
100. DBN1 ENSGALG00000033405 216 0.878 - - - 0.878 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]

There are 961 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA