Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HELLS

Gene Name Gene ID Reads Annotation
HELLS ENSGALG00000005451 7094 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]











Genes with expression patterns similar to HELLS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HELLS ENSGALG00000005451 7094 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
2. SUV39H2 ENSGALG00000013920 4360 2.473 - - - - - - 0.767 0.787 - 0.919 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
3. CCNE2 ENSGALG00000040794 1229 2.453 - - - - - - 0.857 0.727 - 0.869 cyclin E2 [Source:NCBI gene;Acc:420231]
4. ENSGALG00000005870 ENSGALG00000005870 4343 2.385 - - - - - 0.769 0.824 0.792 - -
5. BRD1 ENSGALG00000029379 6047 1.735 - - - - - - 0.879 - - 0.856 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
6. WDSUB1 ENSGALG00000012574 2038 1.722 - - - - - - 0.855 - - 0.867 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
7. C14orf80 C14orf80 1921 1.716 - - - - - - 0.855 - - 0.861
8. SUN1 ENSGALG00000003781 3442 1.703 - - - - - - 0.875 - - 0.828 Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
9. SQLE ENSGALG00000036915 4172 1.7 - - - - - - 0.852 - - 0.848 squalene epoxidase [Source:NCBI gene;Acc:420335]
10. NCAPG2 ENSGALG00000006525 2319 1.694 - - - - - - 0.873 - - 0.821 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
11. LFNG ENSGALG00000038515 5178 1.691 - - - - - - 0.860 - - 0.831 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
12. MTDH ENSGALG00000034050 9525 1.68 - - - - - - 0.836 - - 0.844 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
13. FANCL ENSGALG00000030022 7423 1.668 - - - - - - - 0.839 - 0.829 FA complementation group L [Source:NCBI gene;Acc:421202]
14. SNRNP48 ENSGALG00000013005 1468 1.664 - - - - - - 0.866 - - 0.798 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
15. SUGP1 ENSGALG00000042132 2771 1.663 - - - - - - 0.928 0.735 - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
16. FAM193A ENSGALG00000015667 3075 1.633 - - - - - - 0.890 - - 0.743 family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
17. CDC73 ENSGALG00000002469 4586 1.626 - - - - - - 0.877 - - 0.749 cell division cycle 73 [Source:NCBI gene;Acc:424356]
18. UFD1L 12964 1.626 - - - - - - 0.744 - - 0.882 ubiquitin fusion degradation 1 like (yeast)
19. FN3KRP ENSGALG00000028979 4160 1.625 - - - - - - 0.857 0.768 - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
20. TOP3B ENSGALG00000030051 5953 1.621 - - - - - - 0.838 - - 0.783 DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
21. CETN1 ENSGALG00000026741 7243 1.621 - - - - - - 0.711 - - 0.910 centrin 1 [Source:NCBI gene;Acc:422668]
22. CACYBP ENSGALG00000004554 7320 1.62 - - - - - - 0.838 0.782 - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
23. COPS2 ENSGALG00000000404 8980 1.618 - - - - - - 0.812 - - 0.806 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
24. SPDL1 ENSGALG00000001942 4403 1.616 - - - - - - - 0.764 - 0.852 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
25. ZFR ENSGALG00000003235 8466 1.609 - - - - - - 0.761 - - 0.848 zinc finger RNA binding protein, transcript variant X3
26. C1orf198 ENSGALG00000026600 5651 1.607 - - - - - - 0.706 - - 0.901 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
27. HOXA5 ENSGALG00000025929 6231 1.599 - - - - - - - 0.728 - 0.871 homeobox A5 [Source:NCBI gene;Acc:100858404]
28. RIT1 ENSGALG00000014647 7174 1.587 - - - - - - 0.799 0.788 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
29. MPRIP ENSGALG00000004798 6700 1.583 - - - - - - 0.715 - - 0.868 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
30. NAP1L1 ENSGALG00000010238 14506 1.577 - - - - - - 0.791 - - 0.786 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
31. TRAPPC12 ENSGALG00000016387 2593 1.575 - - - 0.705 - - - - - 0.870 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
32. GCSH ENSGALG00000032679 29231 1.564 - - - - - - - 0.749 - 0.815 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
33. URM1 ENSGALG00000004971 17880 1.561 - - - - - - 0.843 0.718 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
34. ORC4 ENSGALG00000012448 8405 1.553 - - - - - - 0.822 0.731 - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
35. TRPC4AP ENSGALG00000003147 3967 1.553 - - - - - - - 0.748 - 0.805 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
36. HISTH1 ENSGALG00000011747 16825 1.546 - - - - - - 0.744 0.802 - - histone H1
37. CLSPN ENSGALG00000002346 2590 1.546 - - - - - - - 0.713 - 0.833 claspin [Source:NCBI gene;Acc:428223]
38. PPFIA1 ENSGALG00000035774 5258 1.545 - - - - - - - 0.720 - 0.825 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
39. CPSF2 ENSGALG00000010783 5236 1.543 - - - - - - 0.726 - - 0.817 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
40. ATP6V0A1 ENSGALG00000003256 4408 1.542 - - - - - - 0.804 - - 0.738 ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
41. SYS1 ENSGALG00000003929 4487 1.539 - - - - - - 0.784 0.755 - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
42. RNF219 ENSGALG00000016911 4458 1.537 - - - - - - - 0.701 - 0.836 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
43. ENSGALG00000026433 ENSGALG00000026433 14463 1.529 - - - - - - - 0.716 - 0.813
44. LOC426385 ENSGALG00000026301 2703 1.528 - - - - - - - 0.700 - 0.828 serine/threonine kinase 35-like, transcript variant X2
45. PDS5A ENSGALG00000014286 13077 1.527 - - - - - - 0.769 - - 0.758 PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
46. ARHGAP19 ENSGALG00000007609 3655 1.525 - - - - - - 0.739 0.786 - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
47. CAMSAP2 ENSGALG00000002145 6109 1.523 - - - - - - 0.768 - - 0.755 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
48. SYNGR2 ENSGALG00000027902 6953 1.519 - - - - - - 0.764 - - 0.755 Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
49. UTP18 ENSGALG00000002985 7129 1.512 - - - 0.703 - - - 0.809 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
50. ZCCHC6 ENSGALG00000012607 3655 1.482 - - - - - - 0.711 0.771 - - zinc finger CCHC-type containing 6 [Source:NCBI gene;Acc:100857368]
51. TMEM165 ENSGALG00000027886 5468 1.48 - - - - - - - 0.722 - 0.758 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
52. PARN ENSGALG00000003091 6363 1.473 - - - - - - 0.763 0.710 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
53. CCND1 ENSGALG00000007555 6715 1.461 - - - - - - - 0.714 - 0.747 cyclin D1 [Source:NCBI gene;Acc:396341]
54. KIDINS220 ENSGALG00000016409 854 0.954 - - - - - - - - - 0.954 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
55. CCDC66 ENSGALG00000005450 1262 0.951 - - - - - - - - - 0.951 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
56. LOC770492 ENSGALG00000027778 695 0.949 - - - - - - - - - 0.949 ras-related and estrogen-regulated growth inhibitor-like
57. SPATA20 ENSGALG00000006857 3506 0.948 - - - - - - - - - 0.948 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
58. WRNIP1 ENSGALG00000012856 1954 0.94 - - - - - - - - - 0.940 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
59. KLC1 ENSGALG00000011528 1621 0.939 - - - - - - - - - 0.939 kinesin light chain 1, transcript variant X6
60. CASP8AP2 ENSGALG00000015611 5657 0.938 - - - - - - - - - 0.938 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
61. VWA9 ENSGALG00000007491 4790 0.936 - - - - - - - - - 0.936 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
62. BRT-1 BRT-1 26083 0.935 - - - - - - - - - 0.935
63. EIF3I ENSGALG00000003337 28832 0.933 - - - - - - 0.933 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
64. KIAA1551 ENSGALG00000045168 3435 0.932 - - - - - - - - - 0.932 KIAA1551, transcript variant X1
65. B3GALTL B3GALTL 4128 0.932 - - - - - - - - - 0.932
66. TCF25 ENSGALG00000000129 7587 0.931 - - - - - - - - - 0.931 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
67. F2RL2 ENSGALG00000023379 1049 0.925 - - - - - - - - - 0.925 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
68. RFT1 ENSGALG00000001945 2446 0.924 - - - - - - 0.924 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
69. UCH-L1 UCH-L1 12697 0.923 - - - - - - 0.923 - - -
70. MFSD1 ENSGALG00000009593 3116 0.919 - - - - - - - - - 0.919 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
71. DIEXF ENSGALG00000009887 4782 0.919 - - - - - - 0.919 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
72. ARID1B ENSGALG00000013683 3397 0.919 - - - - - - - - - 0.919 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
73. RHOT1 ENSGALG00000003397 5149 0.916 - - - - - - - - - 0.916 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
74. LSM10 ENSGALG00000002127 2519 0.914 - - - - - - 0.914 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
75. MGA 1911 0.913 - - - - - - - - - 0.913 MGA, MAX dimerization protein, transcript variant X15
76. MBNL2 ENSGALG00000016890 3162 0.911 - - - - - - 0.911 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
77. MYO5A ENSGALG00000031987 2469 0.91 - - - - - - - - - 0.910 myosin VA [Source:NCBI gene;Acc:396237]
78. AIMP1 ENSGALG00000010553 17994 0.91 - - - - - - - - - 0.910 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
79. SLC35B1 ENSGALG00000035057 10683 0.909 - - - - - - - - - 0.909 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
80. GPN3 ENSGALG00000003807 6320 0.909 - - - - - - 0.909 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
81. CANX ENSGALG00000032148 11297 0.909 - - - - - - 0.909 - - - calnexin [Source:NCBI gene;Acc:416288]
82. TLCD1 ENSGALG00000003973 17569 0.908 - - - - - - 0.908 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
83. MRPL10 ENSGALG00000014387 12386 0.907 - - - - - - 0.907 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
84. PMPCB ENSGALG00000008280 6357 0.907 - - - - - - 0.907 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
85. IK ENSGALG00000037172 12100 0.905 - - - - - - 0.905 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
86. ATG4B ENSGALG00000006298 2288 0.905 - - - - - - 0.905 - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
87. HNRNPD ENSGALG00000011184 10686 0.905 - - - - - - - - - 0.905 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
88. NSG1 ENSGALG00000015010 5829 0.904 - - - - - - 0.904 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
89. SPERT ENSGALG00000016981 145 0.899 - - - - - - - - - 0.899 spermatid associated [Source:NCBI gene;Acc:418848]
90. C9orf89 C9orf89 3056 0.897 - - - - - - - - - 0.897
91. USP54 ENSGALG00000005232 2749 0.896 - - - - - - 0.896 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
92. TGDS ENSGALG00000016898 3206 0.895 - - - - - - 0.895 - - - TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]
93. SH3BP2 ENSGALG00000015665 431 0.895 - - - - - - - - - 0.895 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
94. RBM34 ENSGALG00000029915 5618 0.895 - - - - - - 0.895 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
95. MORC3 ENSGALG00000036556 2976 0.894 - - - - - - 0.894 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
96. TAF8 ENSGALG00000003498 2071 0.894 - - - - - - 0.894 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
97. CKAP2 ENSGALG00000017025 25020 0.894 - - - - - - - - - 0.894 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
98. SSR2 ENSGALG00000000764 32190 0.892 - - - - - - - - - 0.892 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
99. WIPI1 ENSGALG00000004215 3359 0.891 - - - - - - 0.891 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
100. GPN2 ENSGALG00000027909 5204 0.888 - - - - - - - - - 0.888 GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]

There are 874 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA