Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HDGFL3

Gene Name Gene ID Reads Annotation
HDGFL3 ENSGALG00000006036 13576 HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]











Genes with expression patterns similar to HDGFL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HDGFL3 ENSGALG00000006036 13576 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
2. NAA25 ENSGALG00000041821 12729 1.677 - - - - - - 0.888 0.789 - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
3. SDF4 ENSGALG00000001872 6382 0.952 - - - - - - 0.952 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
4. SIRT1 ENSGALG00000002761 9028 0.952 - - - - - - 0.952 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
5. LARP1 ENSGALG00000040109 14808 0.952 - - - - - - 0.952 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
6. SEMA4B ENSGALG00000008297 11202 0.948 - - - - - - 0.948 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
7. H2AFY_1 ENSGALG00000040141 4895 0.947 - - - - - - 0.947 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
8. AP2B1 ENSGALG00000042125 13229 0.947 - - - - - - 0.947 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
9. GCLM ENSGALG00000005782 15789 0.947 - - - - - - 0.947 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
10. RBM12B ENSGALG00000035129 4314 0.946 - - - - - - 0.946 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
11. BPTF ENSGALG00000038222 7521 0.945 - - - - - - 0.945 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
12. E2F6 ENSGALG00000016454 4747 0.945 - - - - - - 0.945 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
13. DNA2 ENSGALG00000004037 5426 0.945 - - - - - - 0.945 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
14. OGFOD1 6926 0.943 - - - - - - 0.943 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
15. POLR3E ENSGALG00000007008 4010 0.943 - - - - - - 0.943 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
16. ENSGALG00000027854 ENSGALG00000027854 5007 0.941 - - - - - - 0.941 - - -
17. PPP3R1 ENSGALG00000023648 3417 0.94 - - - - - - 0.940 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
18. POR ENSGALG00000002053 5223 0.939 - - - - - - 0.939 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
19. KCTD9 ENSGALG00000000275 3455 0.938 - - - - - - 0.938 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
20. METTL11A METTL11A 11876 0.937 - - - - - - 0.937 - - -
21. TRAM1 ENSGALG00000041112 22876 0.936 - - - - - - 0.936 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
22. ARID4A ENSGALG00000012037 8554 0.936 - - - - - - 0.936 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
23. NDUFA9 ENSGALG00000017282 14358 0.936 - - - - - - 0.936 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
24. ARNT2 ENSGALG00000006445 7050 0.935 - - - - - - 0.935 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
25. RILPL2 ENSGALG00000003321 5632 0.934 - - - - - - 0.934 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
26. SOD2 ENSGALG00000011661 13178 0.934 - - - - - - 0.934 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
27. ATE1 ENSGALG00000009502 3751 0.934 - - - - - - 0.934 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
28. COPE ENSGALG00000003153 19444 0.934 - - - - - - 0.934 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
29. TM9SF3 ENSGALG00000005534 15290 0.931 - - - - - - 0.931 - - - transmembrane 9 superfamily member 3
30. SF3A3 ENSGALG00000001540 9664 0.929 - - - - - - 0.929 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
31. RRN3 ENSGALG00000041989 3934 0.929 - - - - - - 0.929 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
32. TBCCD1 ENSGALG00000006566 2696 0.929 - - - - - - 0.929 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
33. LACTB2 ENSGALG00000038745 3460 0.927 - - - - - - 0.927 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
34. ABCD3 ENSGALG00000005647 4844 0.927 - - - - - - 0.927 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
35. BFAR ENSGALG00000003111 1778 0.927 - - - - - - 0.927 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
36. WBP11 ENSGALG00000011745 11182 0.924 - - - - - - 0.924 - - - WW domain binding protein 11, transcript variant X1
37. NCOA4 ENSGALG00000002066 10544 0.924 - - - - - - 0.924 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
38. DNAJA3 ENSGALG00000007821 3963 0.924 - - - - - - 0.924 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
39. NRD1 NRD1 10827 0.924 - - - - - - 0.924 - - -
40. YBX1 ENSGALG00000004848 20992 0.924 - - - - - - 0.924 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
41. ZMYND11 ENSGALG00000006599 5740 0.923 - - - - - - 0.923 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
42. NDUFB8 ENSGALG00000005704 5781 0.923 - - - - - - 0.923 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
43. EI24 ENSGALG00000038097 24081 0.923 - - - - - - 0.923 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
44. MOB2 ENSGALG00000030499 3658 0.923 - - - - - - 0.923 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
45. LAP3 ENSGALG00000006334 21076 0.921 - - - - - - 0.921 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
46. IRAK2 ENSGALG00000008407 5934 0.921 - - - - - - 0.921 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
47. MYST2 MYST2 8078 0.921 - - - - - - 0.921 - - -
48. ARHGAP29 ENSGALG00000005683 3622 0.92 - - - - - - 0.920 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
49. CLCN3 ENSGALG00000009674 3704 0.92 - - - - - - 0.920 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
50. PMM2 ENSGALG00000007326 8260 0.919 - - - - - - 0.919 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
51. CENPF ENSGALG00000009690 10429 0.918 - - - - - - 0.918 - - - centromere protein F [Source:NCBI gene;Acc:395357]
52. PPIF ENSGALG00000004809 5586 0.918 - - - - - - 0.918 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
53. DYNC1LI1 ENSGALG00000011491 11011 0.917 - - - - - - 0.917 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
54. gga-mir-6643 ENSGALG00000027935 4442 0.917 - - - - - - 0.917 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
55. XRN1 ENSGALG00000002706 4014 0.917 - - - - - - 0.917 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
56. COX7A2L ENSGALG00000037996 13646 0.916 - - - - - - 0.916 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
57. PNO1 ENSGALG00000009093 11153 0.916 - - - - - - 0.916 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
58. MELK ENSGALG00000016438 9237 0.915 - - - - - - - 0.915 - - maternal embryonic leucine zipper kinase [Source:NCBI gene;Acc:428391]
59. MED6 ENSGALG00000029743 9414 0.915 - - - - - - 0.915 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
60. MSRA ENSGALG00000028032 2607 0.914 - - - - - - 0.914 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
61. RPA1 ENSGALG00000003072 8023 0.914 - - - - - - 0.914 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
62. LATS2 4776 0.914 - - - - - - 0.914 - - - large tumor suppressor kinase 2
63. LEPROTL1 ENSGALG00000024482 4251 0.914 - - - - - - 0.914 - - - leptin receptor overlapping transcript-like 1
64. EIF4G3 ENSGALG00000010084 5881 0.914 - - - - - - 0.914 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
65. THOC2 ENSGALG00000008507 9501 0.913 - - - - - - 0.913 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
66. RBBP6 ENSGALG00000006043 9708 0.913 - - - - - - 0.913 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
67. AKAP7 ENSGALG00000029794 3287 0.913 - - - - - - 0.913 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
68. AK6 ENSGALG00000020534 4791 0.912 - - - - - - 0.912 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
69. HACE1 ENSGALG00000015415 1194 0.911 - - - - - - 0.911 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
70. SHQ1 ENSGALG00000007798 1982 0.911 - - - - - - 0.911 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
71. SCRN1 ENSGALG00000011176 3783 0.91 - - - - - - 0.910 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
72. ATN1 ENSGALG00000014554 3270 0.908 - - - - - - 0.908 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
73. TCP1 ENSGALG00000011637 73216 0.908 - - - - - - 0.908 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
74. NDUFS1 ENSGALG00000008606 7898 0.908 - - - - - - - 0.908 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
75. MAP1LC3A ENSGALG00000038721 2230 0.907 - - - - - - 0.907 - - - microtubule associated protein 1 light chain 3 alpha
76. CCND1 ENSGALG00000007555 6715 0.906 - - - - - - 0.906 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
77. NPHP3 ENSGALG00000034586 1465 0.906 - - - - - - 0.906 - - - nephrocystin 3, transcript variant X1
78. DISP1 3281 0.905 - - - - - - 0.905 - - - dispatched RND transporter family member 1, transcript variant X3
79. BTAF1 ENSGALG00000030598 3556 0.905 - - - - - - 0.905 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
80. LMNB2 ENSGALG00000000470 4364 0.905 - - - - - - 0.905 - - - lamin B2 [Source:NCBI gene;Acc:396222]
81. INTS10 ENSGALG00000010130 6320 0.905 - - - - - - 0.905 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
82. GFM1 ENSGALG00000009634 7213 0.905 - - - - - - 0.905 - - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
83. PSMG3 ENSGALG00000004203 11240 0.904 - - - - - - 0.904 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
84. MRE11A MRE11A 5754 0.904 - - - - - - 0.904 - - -
85. CAMKK2 ENSGALG00000040131 2795 0.903 - - - - - - 0.903 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
86. ENSGALG00000002923 ENSGALG00000002923 2233 0.903 - - - - - - 0.903 - - -
87. SFT2D1 ENSGALG00000020005 10855 0.902 - - - - - - 0.902 - - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
88. MRPL44 ENSGALG00000003067 15256 0.9 - - - - - - 0.900 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
89. UBA3 ENSGALG00000013410 6923 0.9 - - - - - - 0.900 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
90. CETN2 ENSGALG00000007510 1688 0.899 - - - - - - 0.899 - - - centrin 2 [Source:NCBI gene;Acc:422303]
91. UTP3 ENSGALG00000011553 8814 0.899 - - - - - - 0.899 - - - UTP3, small subunit processome component homolog (S. cerevisiae)
92. SLC1A1 ENSGALG00000010187 637 0.897 - - - - - - 0.897 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
93. UPF1 ENSGALG00000003220 9496 0.896 - - - - - - 0.896 - - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
94. POPDC3 ENSGALG00000027420 700 0.894 - - - - - - 0.894 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
95. TP53BP2 ENSGALG00000042816 12368 0.894 - - - - - - 0.894 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
96. KLHL29 ENSGALG00000016495 582 0.894 - - - - - - 0.894 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
97. SREBF2 ENSGALG00000041687 4519 0.894 - - - - - - 0.894 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
98. MED7 ENSGALG00000003870 4244 0.893 - - - - - - 0.893 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
99. IMPACT ENSGALG00000015093 1334 0.893 - - - - - - 0.893 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
100. TMEM108 ENSGALG00000036412 2903 0.89 - - - - - - 0.890 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]

There are 141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA