Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HDDC2

Gene Name Gene ID Reads Annotation
HDDC2 ENSGALG00000014841 7674 HD domain containing 2 [Source:NCBI gene;Acc:421719]











Genes with expression patterns similar to HDDC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HDDC2 ENSGALG00000014841 7674 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HD domain containing 2 [Source:NCBI gene;Acc:421719]
2. LMAN1 ENSGALG00000034821 12788 1.629 - - - - - - 0.739 0.890 - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
3. CDC20 ENSGALG00000009971 11197 1.523 - - - - - - 0.704 0.819 - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
4. JMJD1C ENSGALG00000002942 4556 1.505 - - - - - - 0.739 - - 0.766 jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
5. GATD3A ENSGALG00000016918 24760 1.487 - - - - - - 0.770 0.717 - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
6. RBBP8 ENSGALG00000014982 3255 1.474 - - - - - - 0.757 - 0.717 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
7. UMPS ENSGALG00000011770 11331 1.436 - - - - - - 0.721 0.715 - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
8. RABGGTB ENSGALG00000011388 11654 0.902 - - - - - - 0.902 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
9. UBE2V1 ENSGALG00000008015 17947 0.891 - - - - - - 0.891 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
10. FCF1 ENSGALG00000010275 24928 0.881 - - - - - - 0.881 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
11. FANCL ENSGALG00000030022 7423 0.88 - - - - - - 0.880 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
12. ERBB2IP ERBB2IP 5800 0.865 - - - - - - 0.865 - - -
13. HNRNPD ENSGALG00000011184 10686 0.864 - - - - - - 0.864 - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
14. CBLL1 ENSGALG00000038981 6725 0.862 - - - - - - 0.862 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
15. PARP1 ENSGALG00000009228 39433 0.862 - - - - - - 0.862 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
16. CCNDBP1 ENSGALG00000004837 11520 0.86 - - - - - - 0.860 - - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
17. APIP ENSGALG00000031286 6838 0.86 - - - - - - 0.860 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
18. PNRC2 ENSGALG00000004122 19228 0.86 - - - - - - - 0.860 - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
19. BIRC6 ENSGALG00000010541 7999 0.855 - - - - - - 0.855 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
20. ASAP1 ENSGALG00000037618 2887 0.852 - - - - - - 0.852 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:2720]
21. MRPL53 ENSGALG00000037867 6100 0.852 - - - - - - 0.852 - - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
22. EXOSC9 ENSGALG00000011884 3403 0.851 - - - - - - 0.851 - - - exosome component 9 [Source:NCBI gene;Acc:619530]
23. LLPH ENSGALG00000019358 20976 0.85 - - - - - - 0.850 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
24. ENSGALG00000017396 ENSGALG00000017396 9028 0.847 - - - - - - 0.847 - - -
25. PHB ENSGALG00000038604 21632 0.845 - - - - - - - 0.845 - - prohibitin [Source:NCBI gene;Acc:419980]
26. GLRX3 ENSGALG00000010464 22578 0.844 - - - - - - 0.844 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
27. SIVA1 ENSGALG00000011619 15130 0.843 - - - - - - 0.843 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
28. MED21 ENSGALG00000027435 5766 0.843 - - - - - - 0.843 - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
29. CHTF8 ENSGALG00000000632 7230 0.84 - - - - - - 0.840 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
30. MAP2K4 ENSGALG00000032178 5982 0.84 - - - - - - 0.840 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
31. ADSL ENSGALG00000012034 10280 0.84 - - - - - - 0.840 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
32. NDUFA12 ENSGALG00000011325 19807 0.839 - - - - - - 0.839 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
33. EGLN1 ENSGALG00000041422 11032 0.839 - - - - - - 0.839 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
34. TXNL1 ENSGALG00000033862 13899 0.839 - - - - - - 0.839 - - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
35. RIOK2 ENSGALG00000015288 6280 0.839 - - - - - - 0.839 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
36. YWHAZ ENSGALG00000031387 84985 0.839 - - - - - - 0.839 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
37. C1H12ORF23 C1H12ORF23 13234 0.836 - - - - - - 0.836 - - -
38. CLNS1A ENSGALG00000008574 25675 0.836 - - - - - - 0.836 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
39. FNBP1 ENSGALG00000004088 1400 0.835 - - - - - - - 0.835 - - formin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17069]
40. RPS28 ENSGALG00000024398 244056 0.834 - - - - - - 0.834 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
41. VATB VATB 13756 0.834 - - - - - - 0.834 - - -
42. RBM17 ENSGALG00000006332 12656 0.833 - - - - - - 0.833 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
43. TMEM30A ENSGALG00000015904 8533 0.831 - - - - - - 0.831 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
44. EIF2S1 ENSGALG00000009565 63906 0.831 - - - - - - 0.831 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
45. CUL3 ENSGALG00000005108 9571 0.829 - - - - - - 0.829 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
46. ST5 6869 0.829 - - - - - - 0.829 - - - suppression of tumorigenicity 5, transcript variant X1
47. MRPL20 ENSGALG00000001542 28764 0.829 - - - - - - 0.829 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
48. CCNH ENSGALG00000015641 8051 0.829 - - - - - - 0.829 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
49. SPINZ SPINZ 10341 0.827 - - - - - - 0.827 - - -
50. OSTC ENSGALG00000010526 19422 0.827 - - - - - - 0.827 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
51. FAM160B1 ENSGALG00000031404 3153 0.826 - - - - - - 0.826 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
52. COMMD10 ENSGALG00000002308 7442 0.826 - - - - - - 0.826 - - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
53. ZNF593 ENSGALG00000000542 79105 0.824 - - - - - - 0.824 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
54. EBNA1BP2 ENSGALG00000009045 17453 0.824 - - - - - - 0.824 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
55. LSM5 ENSGALG00000041625 22307 0.823 - - - - - - 0.823 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
56. ISL1 ENSGALG00000014884 7666 0.823 - - - - - - - 0.823 - - ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
57. PSMD3 ENSGALG00000033162 25615 0.822 - - - - - - 0.822 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
58. KIAA0020 KIAA0020 14353 0.821 - - - - - - 0.821 - - -
59. CSE1L ENSGALG00000004707 20653 0.821 - - - - - - 0.821 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
60. RFC1 ENSGALG00000014298 6516 0.821 - - - - - - 0.821 - - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
61. RSL1D1 ENSGALG00000033690 13638 0.82 - - - - - - 0.820 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
62. gga-mir-6596 ENSGALG00000026117 2893 0.82 - - - - - - 0.820 - - - gga-mir-6596 [Source:miRBase;Acc:MI0022416]
63. SF3A2 ENSGALG00000021679 12580 0.819 - - - - - - 0.819 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
64. ENY2 ENSGALG00000036618 30314 0.819 - - - - - - 0.819 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
65. ZBTB16 ENSGALG00000038540 5544 0.818 - - - - - - 0.818 - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
66. FARSB ENSGALG00000005236 10738 0.818 - - - - - - 0.818 - - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
67. NDUFV2 ENSGALG00000036625 29234 0.818 - - - - - - 0.818 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
68. GLO1 ENSGALG00000010127 31662 0.818 - - - - - - 0.818 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
69. HMGB2 ENSGALG00000010745 89235 0.818 - - - - - - 0.818 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
70. DKC1 ENSGALG00000005054 30350 0.818 - - - - - - 0.818 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
71. ERGIC2 ENSGALG00000007183 12870 0.818 - - - - - - 0.818 - - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
72. CENPW ENSGALG00000027454 7517 0.817 - - - - - - 0.817 - - - centromere protein W [Source:NCBI gene;Acc:421716]
73. COX7C ENSGALG00000027963 84312 0.817 - - - - - - 0.817 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
74. NDUFS1 ENSGALG00000008606 7898 0.816 - - - - - - 0.816 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
75. AP4E1 2726 0.816 - - - - - - 0.816 - - - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
76. TTYH2 ENSGALG00000026940 15628 0.815 - - - - - - 0.815 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
77. PGAM5 ENSGALG00000002137 7700 0.815 - - - - - - 0.815 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
78. GOLGA7 ENSGALG00000003483 26525 0.814 - - - - - - 0.814 - - - golgin A7 [Source:NCBI gene;Acc:426787]
79. RTCB ENSGALG00000012611 14360 0.813 - - - - - - 0.813 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
80. EIF4A2 ENSGALG00000008684 58507 0.813 - - - - - - 0.813 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
81. WBSCR22 6082 0.813 - - - - - - 0.813 - - - Williams-Beuren syndrome chromosome region 22
82. ATG5 ENSGALG00000015387 7752 0.813 - - - - - - 0.813 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
83. DRG1 ENSGALG00000006921 10791 0.813 - - - - - - 0.813 - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
84. SMC4 ENSGALG00000009553 15715 0.812 - - - - - - 0.812 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
85. TMED2 ENSGALG00000003307 20704 0.812 - - - - - - 0.812 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
86. KIF2C ENSGALG00000010120 8999 0.811 - - - - - - 0.811 - - - kinesin family member 2C, transcript variant X1
87. PREP ENSGALG00000015405 17050 0.81 - - - - - - 0.810 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
88. MARK1 ENSGALG00000009483 10350 0.81 - - - - - - 0.810 - - - microtubule affinity regulating kinase 1 [Source:HGNC Symbol;Acc:HGNC:6896]
89. PTCD3 ENSGALG00000015773 3059 0.809 - - - - - - 0.809 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
90. MRPL2 ENSGALG00000008597 16500 0.808 - - - - - - 0.808 - - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
91. NR2F1 ENSGALG00000027907 25778 0.808 - - - - - - - 0.808 - - nuclear receptor subfamily 2 group F member 1 [Source:HGNC Symbol;Acc:HGNC:7975]
92. TMEM126A ENSGALG00000014066 6149 0.808 - - - - - - 0.808 - - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
93. FAM98A ENSGALG00000010428 9585 0.807 - - - - - - 0.807 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
94. CTSL2 CTSL2 7966 0.806 - - - - - - 0.806 - - -
95. C17H9ORF16 C17H9ORF16 7908 0.806 - - - - - - 0.806 - - -
96. ATG13 ENSGALG00000008347 7374 0.805 - - - - - - 0.805 - - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
97. PPCS ENSGALG00000004882 5759 0.805 - - - - - - 0.805 - - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
98. DERL1 ENSGALG00000033950 15074 0.804 - - - - - - 0.804 - - - derlin 1 [Source:NCBI gene;Acc:420350]
99. TAF3 ENSGALG00000006731 15569 0.804 - - - - - - 0.804 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
100. TMEM167A ENSGALG00000027332 13862 0.804 - - - - - - 0.804 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]

There are 562 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA