Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HDAC9

Gene Name Gene ID Reads Annotation
HDAC9 ENSGALG00000010854 49 histone deacetylase 9 [Source:NCBI gene;Acc:420599]











Genes with expression patterns similar to HDAC9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HDAC9 ENSGALG00000010854 49 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 histone deacetylase 9 [Source:NCBI gene;Acc:420599]
2. ATXN3 ENSGALG00000010766 48 1.705 - - - - - - - 0.963 - 0.742 ataxin 3 [Source:NCBI gene;Acc:378424]
3. IFNAR1 ENSGALG00000030363 22 1.586 - - - - - - - 0.788 - 0.798 interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
4. SERPINB14 SERPINB14 196 1.507 - - - - - 0.760 - - - 0.747
5. C15orf26 C15orf26 21 1 - - - - - - - 1.000 - -
6. NR3C1 ENSGALG00000032992 4 0.983 - - - - - - - 0.983 - - nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
7. PIGH ENSGALG00000009510 13 0.983 - - - - - - - 0.983 - - phosphatidylinositol glycan anchor biosynthesis class H [Source:NCBI gene;Acc:423271]
8. ENSGALG00000010272 ENSGALG00000010272 19 0.983 - - - - - - - 0.983 - -
9. ENSGALG00000010883 ENSGALG00000010883 10 0.983 - - - - - - - 0.983 - -
10. ACOT2L ENSGALG00000023243 3 0.983 - - - - - - - 0.983 - - acyl-coenzyme A thioesterase 2, mitochondrial-like
11. PKN2 ENSGALG00000006237 37 0.983 - - - - - - - 0.983 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
12. ENSGALG00000027018 ENSGALG00000027018 12 0.963 - - - - - - - 0.963 - -
13. OPN4-1 ENSGALG00000041662 10 0.935 - - - - - - - 0.935 - - photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
14. GMNC ENSGALG00000026907 6 0.935 - - - - - - - 0.935 - - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]
15. SGCG ENSGALG00000017122 13 0.935 - - - - - - - 0.935 - - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
16. ENSGALG00000005578 ENSGALG00000005578 16 0.935 - - - - - - - 0.935 - -
17. YPEL2 ENSGALG00000028801 1 0.935 - - - - - - - 0.935 - - yippee like 2 [Source:NCBI gene;Acc:417632]
18. TBC1D2B ENSGALG00000003322 54 0.935 - - - - - - - 0.935 - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
19. IRF8 ENSGALG00000005757 5 0.935 - - - - - - - 0.935 - - interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
20. SHISA2 ENSGALG00000043035 1 0.935 - - - - - - - 0.935 - - shisa family member 2 [Source:NCBI gene;Acc:395162]
21. LNP1 ENSGALG00000015287 14 0.935 - - - - - - - 0.935 - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
22. TRPM6 3 0.935 - - - - - - - 0.935 - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
23. ENSGALG00000006897 ENSGALG00000006897 13 0.935 - - - - - - - 0.935 - -
24. SLC25A12 ENSGALG00000009545 36 0.935 - - - - - - - 0.935 - - solute carrier family 25 member 12 [Source:HGNC Symbol;Acc:HGNC:10982]
25. AGBL2 ENSGALG00000029618 8 0.935 - - - - - - - 0.935 - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
26. NPDC1 ENSGALG00000042635 12 0.935 - - - - - - - 0.935 - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
27. ENSGALG00000024397 ENSGALG00000024397 2 0.935 - - - - - - - 0.935 - -
28. PROK1 ENSGALG00000040082 34 0.935 - - - - - - - 0.935 - - prokineticin 1 [Source:HGNC Symbol;Acc:HGNC:18454]
29. ADORA1 ENSGALG00000000168 43 0.935 - - - - - - - 0.935 - - adenosine A1 receptor [Source:NCBI gene;Acc:374212]
30. ENSGALG00000023305 ENSGALG00000023305 168 0.935 - - - - - - - 0.935 - -
31. AQP11 ENSGALG00000031734 4 0.935 - - - - - - - 0.935 - - aquaporin 11 [Source:HGNC Symbol;Acc:HGNC:19940]
32. SCUBE2 ENSGALG00000032161 63 0.935 - - - - - - - 0.935 - - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
33. RAB3GAP2 ENSGALG00000009503 36 0.935 - - - - - - - 0.935 - - RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
34. VPS37C ENSGALG00000038541 169 0.935 - - - - - - - 0.935 - - VPS37C, ESCRT-I subunit [Source:NCBI gene;Acc:423023]
35. LOC422926 ENSGALG00000027090 16 0.935 - - - - - - - 0.935 - - uncharacterized LOC422926
36. ENSGALG00000016601 ENSGALG00000016601 16 0.935 - - - - - - - 0.935 - -
37. TRPM8 ENSGALG00000004116 2 0.935 - - - - - - - 0.935 - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
38. CDH12 ENSGALG00000012941 223 0.935 - - - - - - - 0.935 - - cadherin 12, transcript variant X8
39. TIAM1 ENSGALG00000015842 17 0.935 - - - - - - - 0.935 - - T cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:HGNC:11805]
40. ENSGALG00000028196 ENSGALG00000028196 8 0.935 - - - - - - - 0.935 - -
41. Mar-03 Mar-03 45 0.935 - - - - - - - 0.935 - -
42. CD1A1 CD1A1 12 0.935 - - - - - - - 0.935 - -
43. TROVE2 ENSGALG00000002504 14 0.935 - - - - - - - 0.935 - - TROVE domain family member 2 [Source:HGNC Symbol;Acc:HGNC:11313]
44. ENSGALG00000004904 ENSGALG00000004904 237 0.935 - - - - - - - 0.935 - -
45. CLVS2 ENSGALG00000014853 22 0.935 - - - - - - - 0.935 - - clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
46. ATP12A ENSGALG00000006469 7 0.935 - - - - - - - 0.935 - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
47. TINAG ENSGALG00000016300 5 0.935 - - - - - - - 0.935 - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
48. PPP1R16B ENSGALG00000003568 25 0.935 - - - - - - - 0.935 - - protein phosphatase 1 regulatory subunit 16B [Source:NCBI gene;Acc:419170]
49. INTS3 8 0.935 - - - - - - - 0.935 - - integrator complex subunit 3, transcript variant X2
50. CYTH4 ENSGALG00000012454 12 0.935 - - - - - - - 0.935 - - cytohesin 4 [Source:NCBI gene;Acc:418043]
51. LOC420992 ENSGALG00000013430 126 0.935 - - - - - - - 0.935 - - LOC420992, transcript variant X6
52. ENSGALG00000027473 ENSGALG00000027473 0 0.935 - - - - - - - 0.935 - -
53. SLC24A5 ENSGALG00000004885 8 0.935 - - - - - - - 0.935 - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
54. NUDT3 ENSGALG00000002830 7 0.935 - - - - - - - 0.935 - - nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
55. FOXN1 ENSGALG00000043868 3 0.935 - - - - - - - 0.935 - - forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
56. LRRC43 LRRC43 16 0.935 - - - - - - - 0.935 - -
57. USP49 ENSGALG00000003461 10 0.935 - - - - - - - 0.935 - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
58. SV2C ENSGALG00000014967 7 0.935 - - - - - - - 0.935 - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
59. SRGAP2 ENSGALG00000000816 97 0.921 - - - - - - - 0.921 - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
60. SEC14L5 ENSGALG00000045758 25 0.918 - - - - - - - 0.918 - - SEC14 like lipid binding 5 [Source:HGNC Symbol;Acc:HGNC:29032]
61. PCSK1 ENSGALG00000014681 73 0.918 - - - - - - - 0.918 - - proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]
62. PPP1R26 ENSGALG00000002489 45 0.918 - - - - - - - 0.918 - - protein phosphatase 1 regulatory subunit 26 [Source:HGNC Symbol;Acc:HGNC:29089]
63. CPXM2 ENSGALG00000009693 23 0.914 - - - - - - - 0.914 - - carboxypeptidase X, M14 family member 2 [Source:HGNC Symbol;Acc:HGNC:26977]
64. NTF3 ENSGALG00000027299 72 0.9 - - - - - - - - - 0.900 neurotrophin 3 [Source:NCBI gene;Acc:428099]
65. DDX43 ENSGALG00000015928 6 0.89 - - - - - - - 0.890 - - DEAD-box helicase 43
66. COL23A1 ENSGALG00000006708 181 0.88 - - - - - - - - - 0.880 collagen type XXIII alpha 1 chain, transcript variant X1
67. FRRS1 ENSGALG00000005418 332 0.861 - - - - - - - - - 0.861 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
68. TRIM25 ENSGALG00000003144 12 0.847 - - - - - - - 0.847 - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
69. CECR2 ENSGALG00000013034 12 0.837 - - - - - - - 0.837 - - CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
70. ASS1 ENSGALG00000023689 327 0.833 - - - - - - - 0.833 - - argininosuccinate synthase 1 [Source:NCBI gene;Acc:417185]
71. GALNT14 ENSGALG00000009078 126 0.833 - - - - - - - 0.833 - - polypeptide N-acetylgalactosaminyltransferase 14 [Source:HGNC Symbol;Acc:HGNC:22946]
72. LYG2 ENSGALG00000016761 7 0.827 - - - - - - - - - 0.827 lysozyme g2 [Source:NCBI gene;Acc:395708]
73. COL25A1 ENSGALG00000039411 5 0.827 - - - - - - - - - 0.827 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
74. BF1 ENSGALG00000033932 18 0.827 - - - - - - - - - 0.827 MHC BF1 class I [Source:NCBI gene;Acc:693260]
75. ENSGALG00000026222 ENSGALG00000026222 3 0.827 - - - - - - - - - 0.827
76. VIPR1 ENSGALG00000005259 3 0.827 - - - - - - - - - 0.827 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
77. CUBN ENSGALG00000008704 21 0.827 - - - - - - - - - 0.827 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
78. XKRX ENSGALG00000006637 13 0.827 - - - - - - - - - 0.827 XK related, X-linked, transcript variant X4
79. SNORA53 SNORA53 6 0.827 - - - - - - - - - 0.827
80. CKV6.3 CKV6.3 13 0.827 - - - - - - - - - 0.827
81. RIBC2 ENSGALG00000014232 13 0.82 - - - - - - - 0.820 - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
82. SLC10A4 ENSGALG00000033908 300 0.817 - - - - - 0.817 - - - - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
83. MANSC4 32 0.81 - - - - - - - - - 0.810 MANSC domain containing 4, transcript variant X1
84. ENTPD5 ENSGALG00000010202 69 0.807 - - - - - - - - - 0.807 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
85. SORL1 ENSGALG00000006598 39 0.805 - - - - - - - - - 0.805 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
86. RAB11FIP1 41 0.804 - - - - - - - - - 0.804 RAB11 family interacting protein 1, transcript variant X2
87. DCX ENSGALG00000007993 335 0.799 - - - - - - - 0.799 - - doublecortin [Source:NCBI gene;Acc:374242]
88. PARD6B ENSGALG00000007994 15 0.799 - - - - - - - 0.799 - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
89. FAM126B ENSGALG00000020869 19 0.798 - - - - - - - - - 0.798 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
90. KLHL22 ENSGALG00000006422 132 0.798 - - - - - - 0.798 - - - kelch like family member 22, transcript variant X2
91. CFAP99 ENSGALG00000015685 32 0.798 - - - - - - - - - 0.798 cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
92. ENSGALG00000026501 ENSGALG00000026501 39 0.796 - - - - - 0.796 - - - -
93. IKZF1 ENSGALG00000013086 58 0.79 - - - - - - - - - 0.790 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
94. FMN1 ENSGALG00000009723 100 0.789 - - - - - - - - - 0.789 formin 1 [Source:NCBI gene;Acc:386747]
95. ENSGALG00000020719 ENSGALG00000020719 25 0.788 - - - - - - - 0.788 - -
96. SBSPONL ENSGALG00000005862 129 0.788 - - - - - - - 0.788 - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
97. AREG ENSGALG00000010866 16 0.788 - - - - - - - - - 0.788 amphiregulin [Source:NCBI gene;Acc:428752]
98. FGF7 ENSGALG00000028158 189 0.788 - - - - - - - - - 0.788 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
99. GRHL1 ENSGALG00000038495 221 0.787 - - - - - - - - - 0.787 grainyhead like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:17923]
100. KIAA1549L ENSGALG00000012020 33 0.787 - - - - - - - - - 0.787 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]

There are 88 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA