Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HDAC5

Gene Name Gene ID Reads Annotation
HDAC5 ENSDARG00000075139 1287 histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]










Genes with expression patterns similar to HDAC5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HDAC5 ENSDARG00000075139 1287 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
2. ELMSAN1_1 ELMSAN1_1 1337 3.178 0.994 0.758 - - - 0.724 0.702 - -
3. ARHGEF5 2727 2.522 0.955 0.766 - - - - 0.801 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
4. CU571336.1 ENSDARG00000099892 2164 2.447 0.990 0.707 - - - - 0.750 - -
5. tmem194a tmem194a 745 1.871 0.998 0.873 - - - - - - -
6. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.845 0.991 - - - - - 0.854 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
7. mgat1a ENSDARG00000012407 605 1.84 0.987 0.853 - - - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]
8. scinla ENSDARG00000102415, ENSDARG00000117110 1996 1.817 0.996 0.821 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
9. tctex1d1 ENSDARG00000103545 409 1.811 0.997 - - - - - 0.814 - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
10. calub ENSDARG00000005115 1478 1.802 0.993 - - - - 0.809 - - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
11. taf6l ENSDARG00000079684 1408 1.802 0.994 - - - - 0.808 - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
12. MGST1 MGST1 1958 1.798 0.972 - - - - - 0.826 - -
13. tarbp2 ENSDARG00000070471 1946 1.791 0.995 - - - - - 0.796 - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
14. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.766 - 0.898 - - - - 0.868 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
15. TMEM30B ENSDARG00000054122 1519 1.763 0.948 - - - - - 0.815 - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
16. whsc1 1701 1.758 0.995 - - - - - 0.763 - - Wolf-Hirschhorn syndrome candidate 1
17. psmc1a ENSDARG00000030537 2799 1.751 0.976 - - - - - 0.775 - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
18. selt1b 1396 1.746 0.991 0.755 - - - - - - - selenoprotein T, 1b
19. tmem8a ENSDARG00000032795 677 1.743 - 0.892 - - - - 0.851 - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
20. gltpd1 gltpd1 377 1.741 - 0.865 - - - - 0.876 - -
21. atg4b ENSDARG00000052104 758 1.736 0.998 - - - - - 0.738 - - autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
22. yaf2 ENSDARG00000015966 1905 1.735 - 0.878 - - - - 0.857 - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
23. myo6a ENSDARG00000044016 847 1.735 0.996 0.739 - - - - - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
24. dkc1 ENSDARG00000016484 7088 1.727 0.939 - - - - - 0.788 - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
25. SLC38A9 ENSDARG00000032769 35 1.702 - 0.848 - - - - 0.854 - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
26. kremen1 ENSDARG00000062579 190 1.696 - 0.790 - - - - 0.906 - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
27. cd2ap ENSDARG00000015224 2830 1.694 0.982 - - - - - 0.712 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
28. poc1bl ENSDARG00000012745 2451 1.688 0.988 - - - - - 0.700 - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
29. eppk1 ENSDARG00000096359 4315 1.687 - 0.882 - - - - 0.805 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
30. cmasb 499 1.671 - 0.881 - - - - 0.790 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
31. ostm1 ENSDARG00000069808 1024 1.668 - 0.775 - - - - 0.893 - - osteopetrosis associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-270]
32. si:dkey-83k24.5 ENSDARG00000093019 506 1.667 0.963 - - - - - 0.704 - - si:dkey-83k24.5 [Source:ZFIN;Acc:ZDB-GENE-081104-440]
33. emc4 ENSDARG00000039268 553 1.664 - 0.846 - - - - 0.818 - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
34. tnrc6b ENSDARG00000074161 4597 1.663 - - - - - 0.818 0.845 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
35. soul3 ENSDARG00000102257 939 1.659 - 0.821 - - - - 0.838 - - heme-binding protein soul3 [Source:ZFIN;Acc:ZDB-GENE-060825-287]
36. CECR2 ENSDARG00000078310 903 1.658 - 0.866 - - - - 0.792 - - cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
37. nudt17 ENSDARG00000008014 479 1.65 - - - - - 0.808 0.842 - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
38. ormdl1 ENSDARG00000014333 1589 1.648 - 0.879 - - - - 0.769 - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
39. tmem50a ENSDARG00000015757 3244 1.646 - 0.842 - - - - 0.804 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
40. trpm4 trpm4 501 1.645 - 0.874 - - - - 0.771 - -
41. spc25 ENSDARG00000078433 1316 1.645 - - - - - 0.854 0.791 - - SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-13]
42. lsr ENSDARG00000099291 881 1.644 - 0.935 - - - - 0.709 - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
43. zgc:113372 ENSDARG00000053263 178 1.641 - - - - - 0.785 0.856 - - zgc:113372 [Source:ZFIN;Acc:ZDB-GENE-050913-150]
44. cdc20 ENSDARG00000100741 3264 1.633 - 0.854 - - - - 0.779 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
45. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 1.623 - 0.874 - - - - 0.749 - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
46. galnt6 ENSDARG00000014386 1126 1.621 - 0.769 - - - 0.852 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
47. CU633775.1 ENSDARG00000113543 319 1.62 - 0.888 - - - 0.732 - - -
48. dnmbp ENSDARG00000074121 2711 1.616 - - - - - 0.717 0.899 - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
49. si:dkey-240h12.4 ENSDARG00000034210 114 1.613 - - - - - 0.754 0.859 - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
50. atp11c ENSDARG00000036442, ENSDARG00000116165 336 1.61 - 0.810 - - - - 0.800 - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
51. trmt1l ENSDARG00000042057 466 1.608 - 0.857 - - - 0.751 - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
52. ano1 ENSDARG00000102335 445 1.607 - 0.821 - - - 0.786 - - - anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3]
53. lonp1 ENSDARG00000102765 507 1.602 - 0.777 - - - - 0.825 - - lon peptidase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4006]
54. abhd4 ENSDARG00000102887 748 1.601 - 0.725 - - - - 0.876 - - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
55. si:ch211-215d8.2 ENSDARG00000093233 784 1.599 - 0.834 - - - - 0.765 - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
56. gsk3aa ENSDARG00000029501 957 1.598 - - - - - 0.742 0.856 - - glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
57. LRRC8E LRRC8E 495 1.597 - - - - - 0.726 0.871 - -
58. GEMIN7 ENSDARG00000041011 529 1.597 - 0.795 - - - - 0.802 - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
59. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 1.596 - 0.871 - - - - 0.725 - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
60. NUDT12 ENSDARG00000100813 378 1.595 - 0.791 - - - - 0.804 - - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
61. tgfbr2 tgfbr2 1117 1.589 - 0.762 - - - - 0.827 - -
62. glrx ENSDARG00000028106 16225 1.585 0.856 - - - - - 0.729 - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
63. GANAB_2 GANAB_2 3210 1.583 - 0.723 - - - - 0.860 - -
64. grhl3 ENSDARG00000078552 897 1.583 - 0.705 - - - - 0.878 - - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
65. krt17 ENSDARG00000094041 7683 1.58 - 0.799 - - - - 0.781 - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
66. arl4ca ENSDARG00000057606 4686 1.578 0.870 - - - - - 0.708 - - ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
67. klf2b ENSDARG00000040432 1730 1.571 - 0.836 - - - 0.735 - - - Kruppel-like factor 2b [Source:ZFIN;Acc:ZDB-GENE-011109-2]
68. zgc:110434_1 30 1.571 - - - - - 0.719 0.852 - - zgc:110434
69. pggt1b ENSDARG00000103464 441 1.566 - - - - - 0.701 0.865 - - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
70. zgc:174935 ENSDARG00000079255 532 1.566 - - - - - 0.709 0.857 - - zgc:174935 [Source:ZFIN;Acc:ZDB-GENE-080204-78]
71. si:dkey-176f19.6 si:dkey-176f19.6 373 1.561 - - - - - 0.709 0.852 - -
72. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 1.558 - - - - - - 0.845 - 0.713 retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
73. si:ch211-232i5.3 ENSDARG00000086874 1256 1.55 - 0.827 - - - - 0.723 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
74. TM2D2 ENSDARG00000035515 561 1.548 - 0.832 - - - - 0.716 - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
75. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.541 - 0.734 - - - - 0.807 - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
76. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 1.531 - 0.783 - - - 0.748 - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
77. pon3 pon3 1146 1.528 - 0.791 - - - - 0.737 - -
78. zgc:91985 zgc:91985 1517 1.526 - - - - - 0.745 0.781 - -
79. ralgps2 ENSDARG00000026519 1610 1.525 - - - - - 0.737 0.788 - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
80. mettl1 ENSDARG00000076518 366 1.521 - 0.730 - - - 0.791 - - - methyltransferase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-24]
81. zgc:92313 ENSDARG00000040513 790 1.521 - 0.785 - - - - 0.736 - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
82. gna13a ENSDARG00000073765 925 1.52 - 0.754 - - - 0.766 - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
83. gng5 ENSDARG00000039830 12102 1.511 - - - - - 0.769 0.742 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
84. si:dkeyp-53d3.5 ENSDARG00000101542 171 1.506 - - - - - - 0.804 - 0.702 si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
85. stk11 ENSDARG00000046074 506 1.484 - 0.774 - - - 0.710 - - - serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
86. rgp1 ENSDARG00000006545 790 1.472 - - - - - 0.712 0.760 - - GP1 homolog, RAB6A GEF complex partner 1 [Source:ZFIN;Acc:ZDB-GENE-040718-352]
87. spsb4b ENSDARG00000040538 372 1.464 - 0.758 - - - 0.706 - - - splA/ryanodine receptor domain and SOCS box containing 4b [Source:ZFIN;Acc:ZDB-GENE-040801-213]
88. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 1.462 - - - - - 0.720 0.742 - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
89. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.454 - 0.747 - - - - 0.707 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
90. NIPBL NIPBL 871 1.438 - 0.714 - - - - 0.724 - -
91. SUSD4 ENSDARG00000026335 195 0.998 0.998 - - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
92. daam2 ENSDARG00000028393 226 0.998 0.998 - - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
93. slc22a2 ENSDARG00000030530 313 0.998 0.998 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
94. zyx ENSDARG00000075733 429 0.998 0.998 - - - - - - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
95. chst14 ENSDARG00000043011 345 0.998 0.998 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
96. dhcr7 ENSDARG00000103226 673 0.998 0.998 - - - - - - - - 7-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-030912-9]
97. RNF214 RNF214 816 0.998 0.998 - - - - - - - -
98. bbs5 ENSDARG00000039827 211 0.998 0.998 - - - - - - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
99. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.997 0.997 - - - - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
100. cylda ENSDARG00000060058 768 0.997 0.997 - - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]

There are 1673 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA