Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HDAC4

Gene Name Gene ID Reads Annotation
HDAC4 ENSGALG00000004288 2124 histone deacetylase 4 [Source:NCBI gene;Acc:374207]











Genes with expression patterns similar to HDAC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HDAC4 ENSGALG00000004288 2124 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 histone deacetylase 4 [Source:NCBI gene;Acc:374207]
2. TFG ENSGALG00000015299 849 1.88 - - - - - - - 0.961 - 0.919 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
3. ATP2B2 ENSGALG00000030908 584 1.808 - - - - - - - 0.869 - 0.939 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
4. ENSGALG00000006569 ENSGALG00000006569 2169 1.803 - - - - - - - 0.945 - 0.858
5. ANKRA2 ENSGALG00000013511 3460 1.772 - - - - - - - 0.851 - 0.921 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
6. ENSGALG00000014441 ENSGALG00000014441 1442 1.739 - - - - - - - 0.921 - 0.818
7. GADD45 GADD45 8780 1.704 - - - - - - - 0.946 - 0.758
8. U2SURP ENSGALG00000002612 4255 1.689 - - - - 0.821 - - - - 0.868 U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
9. TWF2 ENSGALG00000003977 6597 1.658 - - - - 0.757 - - - - 0.901 twinfilin actin binding protein 2 [Source:NCBI gene;Acc:415940]
10. CASP7 ENSGALG00000008933 506 1.654 - - - - - - - 0.952 - 0.702 caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
11. PSMD1 ENSGALG00000007664 7609 1.642 - - - - - - - 0.939 - 0.703 proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
12. FERMT2 ENSGALG00000012425 5480 1.608 - - - - - - - 0.765 - 0.843 fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
13. NAT9 ENSGALG00000007723 2098 1.587 - - - - 0.830 - - - - 0.757 N-acetyltransferase 9 (putative), transcript variant X7
14. AP4E1 2726 1.577 - - - - - - - 0.814 0.763 - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
15. ANKRD13C ENSGALG00000031210 2152 1.568 - - - - 0.774 - - - - 0.794 ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
16. S100A10 ENSGALG00000028774 8695 1.564 - - - - 0.726 - - 0.838 - - S100 calcium binding protein A10 [Source:NCBI gene;Acc:396506]
17. TEX264 ENSGALG00000003832 3053 1.547 - - - - - - - 0.785 - 0.762 testis expressed 264 [Source:NCBI gene;Acc:415938]
18. MYCL ENSGALG00000024047 10367 1.538 - - - - - - - 0.782 - 0.756 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
19. MED18 ENSGALG00000028149 2684 1.535 - - - - 0.790 - - - - 0.745 mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
20. TPGS2 ENSGALG00000026547 1967 1.528 - - - - 0.745 - - - - 0.783 tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
21. GPX3 ENSGALG00000004521 10856 1.506 - - - - - - - 0.768 - 0.738 glutathione peroxidase 3 [Source:NCBI gene;Acc:427638]
22. SLC10A7 ENSGALG00000010006 2064 1.502 - - - - 0.755 - - - 0.747 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
23. PPP1CC ENSGALG00000004571 14748 1.486 - - - - 0.783 - - - - 0.703 protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
24. KIAA0930 ENSGALG00000014226 1243 0.98 - - - - - - - 0.980 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
25. PHLPP2 ENSGALG00000000875 561 0.974 - - - - - - - 0.974 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
26. ENSGALG00000001854 ENSGALG00000001854 965 0.973 - - - - - - - 0.973 - -
27. TRIM62 ENSGALG00000028437 5124 0.972 - - - - - - - 0.972 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
28. MRC1 ENSGALG00000008629 259 0.971 - - - - - - - 0.971 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
29. PRPSAP1 ENSGALG00000021539 3517 0.971 - - - - - - - 0.971 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
30. FUBP1 ENSGALG00000008939 2850 0.968 - - - - - - - 0.968 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
31. PYGL ENSGALG00000012365 4691 0.967 - - - - - - - 0.967 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
32. CENPC1 CENPC1 3324 0.967 - - - - - - - 0.967 - -
33. SEMA3E ENSGALG00000038225 677 0.966 - - - - - - - 0.966 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
34. CLUH ENSGALG00000005854 2100 0.964 - - - - - - - 0.964 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
35. II II 929 0.964 - - - - - - - 0.964 - -
36. EX-FABP EX-FABP 516 0.964 - - - - - - - 0.964 - -
37. LAMP2 ENSGALG00000008572 198 0.963 - - - - - - - 0.963 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
38. TMEM200A ENSGALG00000002282 77 0.963 - - - - - - - 0.963 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
39. TES ENSGALG00000031934 5908 0.962 - - - - - - - 0.962 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
40. TOX ENSGALG00000039102 1434 0.962 - - - - - - - 0.962 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
41. CWH43 ENSGALG00000041921 68 0.962 - - - - - - - 0.962 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
42. CHUK ENSGALG00000003289 5698 0.962 - - - - - - - 0.962 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
43. VPS37A ENSGALG00000013646 55 0.962 - - - - - - - 0.962 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
44. GAA ENSGALG00000038853 158 0.962 - - - - - - - 0.962 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
45. PAMR1 ENSGALG00000007886 928 0.962 - - - - - - - 0.962 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
46. TRIM24 ENSGALG00000012823 2725 0.961 - - - - - - - - - 0.961 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
47. ZBTB26 ENSGALG00000042762 1920 0.961 - - - - - - - 0.961 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
48. SLC30A2 ENSGALG00000010375 44 0.961 - - - - - - - 0.961 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
49. ORAI1 ENSGALG00000004240 515 0.961 - - - - - - - 0.961 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
50. LIPG ENSGALG00000043734 2490 0.961 - - - - - - - 0.961 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
51. YARS2 503 0.96 - - - - - - - 0.960 - - tyrosyl-tRNA synthetase 2
52. MDM4 ENSGALG00000000636 91 0.96 - - - - - - - 0.960 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
53. PDCD7 ENSGALG00000021027 3807 0.96 - - - - - - - - - 0.960 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
54. DNAJC11 ENSGALG00000000627 769 0.96 - - - - - - - 0.960 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
55. DSG2 ENSGALG00000015142 67 0.959 - - - - - - - 0.959 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
56. SLC41A1 ENSGALG00000000721 1604 0.958 - - - - - - - 0.958 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
57. TRMT61B ENSGALG00000008979 615 0.957 - - - - - - - 0.957 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
58. SLC25A48 ENSGALG00000006341 2606 0.956 - - - - - - - 0.956 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
59. LOC422106 ENSGALG00000019757 453 0.956 - - - - - - - 0.956 - - uncharacterized LOC422106
60. EDA ENSGALG00000035966 602 0.955 - - - - - - - 0.955 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
61. ABCB10 ENSGALG00000011096 1407 0.955 - - - - - - - 0.955 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
62. ENSGALG00000016572 ENSGALG00000016572 79 0.954 - - - - - - - 0.954 - -
63. C4BPA ENSGALG00000001175 4278 0.953 - - - - - - - 0.953 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
64. LRAT ENSGALG00000009276 220 0.953 - - - - - - - 0.953 - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
65. NIT1 ENSGALG00000007585 1256 0.952 - - - - - - - 0.952 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
66. WWC1 ENSGALG00000001826 4666 0.952 - - - - - - - - - 0.952 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
67. HSDL1 ENSGALG00000003273 1108 0.952 - - - - - - - 0.952 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
68. ANXA6 ENSGALG00000004357 2891 0.952 - - - - - - - 0.952 - - annexin A6 [Source:NCBI gene;Acc:395481]
69. CECR5L ENSGALG00000005020 116 0.952 - - - - - - - 0.952 - - cat eye syndrome chromosome region, candidate 5-like
70. B3GNT7 ENSGALG00000007701 929 0.951 - - - - - - - 0.951 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
71. RASGEF1A ENSGALG00000002525 918 0.951 - - - - - - - 0.951 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
72. PINK1 ENSGALG00000037593 3794 0.948 - - - - - - - 0.948 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
73. LRRC45 ENSGALG00000002877 1751 0.948 - - - - - - - 0.948 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
74. TM2D3 ENSGALG00000026271 2566 0.948 - - - - - - - 0.948 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
75. TCEANC ENSGALG00000016581 948 0.946 - - - - - - - 0.946 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
76. TCN2 3959 0.946 - - - - - - - - - 0.946 transcobalamin 2
77. HSPA13 ENSGALG00000019201 712 0.946 - - - - - - - 0.946 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
78. SOX5 ENSGALG00000032768 998 0.945 - - - - - - - 0.945 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
79. CCDC51 ENSGALG00000006465 1845 0.944 - - - - - - - 0.944 - - coiled-coil domain containing 51, transcript variant X1
80. AMER1 ENSGALG00000007599 994 0.943 - - - - - - - 0.943 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
81. SERPINB6 ENSGALG00000012866 1582 0.943 - - - - - - - - - 0.943 serpin family B member 6 [Source:NCBI gene;Acc:420895]
82. GPX7 ENSGALG00000010633 7224 0.942 - - - - - - - 0.942 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
83. TRMT44 ENSGALG00000015594 1490 0.942 - - - - - - - - - 0.942 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
84. SENP5 ENSGALG00000008545 909 0.941 - - - - - - - 0.941 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
85. ARAP2 ENSGALG00000041373 233 0.941 - - - - - - - 0.941 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
86. RIN3 ENSGALG00000010806 729 0.941 - - - - - - - 0.941 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
87. PRICKLE1 ENSGALG00000009556 60 0.941 - - - - - - - - - 0.941 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
88. NRG4 ENSGALG00000002952 1440 0.941 - - - - - - - 0.941 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
89. CCBL2 CCBL2 184 0.94 - - - - - - - - - 0.940
90. TUSC3 ENSGALG00000013674 2848 0.939 - - - - - - - 0.939 - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
91. ACOX1 ENSGALG00000002159 2953 0.938 - - - - - - - - - 0.938 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
92. ARHGAP11A ENSGALG00000009731 6817 0.938 - - - - - - - - - 0.938 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
93. ISCA2 ENSGALG00000020417 1130 0.938 - - - - - - - 0.938 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
94. TRIM3 ENSGALG00000034004 110 0.938 - - - - - - - - - 0.938 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
95. SEC11C ENSGALG00000031663 4266 0.936 - - - - - - - 0.936 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
96. ANKRD40L ENSGALG00000026189 887 0.936 - - - - - - - 0.936 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
97. C5orf24 ENSGALG00000006371 1573 0.936 - - - - - - - - - 0.936 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
98. TM6SF2 ENSGALG00000029015 109 0.936 - - - - - - - - - 0.936 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
99. COL6A2 ENSGALG00000039216 892 0.936 - - - - - - - 0.936 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
100. TRAM2 ENSGALG00000016673 438 0.936 - - - - - - - 0.936 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]

There are 645 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA