Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HDAC3

Gene Name Gene ID Reads Annotation
HDAC3 ENSGALG00000002634 130 histone deacetylase 3 [Source:NCBI gene;Acc:395506]











Genes with expression patterns similar to HDAC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HDAC3 ENSGALG00000002634 130 6 - 1.000 1.000 - 1.000 1.000 1.000 - - 1.000 histone deacetylase 3 [Source:NCBI gene;Acc:395506]
2. TRAF3IP3 ENSGALG00000001373 11 1.935 - - 0.935 - 1.000 - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
3. SCN4B ENSGALG00000007409 22 1.883 - - 0.915 - - 0.968 - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
4. LSM14B ENSGALG00000005125 31 1.847 - - 0.847 - - - 1.000 - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
5. C9ORF9 C9ORF9 13 1.782 - - - - 1.000 - 0.782 - - -
6. TPTE2 ENSGALG00000017031 29 1.755 - - 0.936 - - 0.819 - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
7. LONRF3 ENSGALG00000008860 55 1.693 - - 0.833 - - 0.860 - - - - LON peptidase N-terminal domain and ring finger 3 [Source:HGNC Symbol;Acc:HGNC:21152]
8. CD44 ENSGALG00000039080 100 1.689 - - - - 0.859 0.830 - - - - CD44 molecule (Indian blood group) [Source:NCBI gene;Acc:395666]
9. HS3ST5 ENSGALG00000026594 44 1.688 - - 0.859 - 0.829 - - - - - heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]
10. STK32A ENSGALG00000029195 27 1.623 - - - - 0.732 - 0.891 - - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
11. ARHGEF18 ENSGALG00000003572 224 1.554 - - 0.702 - - 0.852 - - - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
12. DGKG ENSGALG00000005721 17 1 - - - - 1.000 - - - - - diacylglycerol kinase gamma [Source:HGNC Symbol;Acc:HGNC:2853]
13. ADGB ENSGALG00000012317 28 1 - - - - - - 1.000 - - - androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
14. LRRC7 ENSGALG00000011284 13 1 - - - - 1.000 - - - - - leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:18531]
15. ANKFY1 ENSGALG00000001467 21 1 - - - - - - 1.000 - - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
16. ACKR4 ENSGALG00000041491 7 1 - - - - 1.000 - - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
17. PFN4 ENSGALG00000019866 53 1 - - - - - - 1.000 - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
18. KIF26B ENSGALG00000010664 41 1 - - - - 1.000 - - - - - kinesin family member 26B [Source:HGNC Symbol;Acc:HGNC:25484]
19. TMEM45B ENSGALG00000001203 48 1 - - - - - - 1.000 - - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
20. ENSGALG00000011273 ENSGALG00000011273 9 1 - - - - 1.000 - - - - -
21. C1orf131 C1orf131 141 1 - - - - - - 1.000 - - -
22. C1orf112 ENSGALG00000032743 8 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
23. ENSGALG00000014620 ENSGALG00000014620 7 1 - - - - - - 1.000 - - -
24. RS1 ENSGALG00000016523 11 1 - - - - - - 1.000 - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
25. MAPK8IP3 ENSGALG00000029514 57 1 - - - - - - 1.000 - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
26. GRB10 ENSGALG00000013100 37 1 - - - - - - 1.000 - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
27. MTMR3 ENSGALG00000008051 9 1 - - - - - - 1.000 - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
28. PTHRP PTHRP 8 1 - - - - - - 1.000 - - -
29. CXorf21 ENSGALG00000016286 4 1 - - - - 1.000 - - - - - chromosome X open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:25667]
30. HTR4 ENSGALG00000001383 2 1 - - - - - - 1.000 - - - 5-hydroxytryptamine receptor 4 [Source:HGNC Symbol;Acc:HGNC:5299]
31. AFF1 ENSGALG00000043935 34 1 - - - - 1.000 - - - - - AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
32. PTCHD3 ENSGALG00000023347 5 1 - - - - - - 1.000 - - - patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]
33. ENSGALG00000010336 ENSGALG00000010336 16 1 - - - - 1.000 - - - - -
34. CIPC ENSGALG00000010390 2 1 - - - - - - 1.000 - - - CLOCK interacting pacemaker [Source:HGNC Symbol;Acc:HGNC:20365]
35. ADAMTS10 ENSGALG00000033157 243 1 - - - - - - 1.000 - - - ADAM metallopeptidase with thrombospondin type 1 motif 10 [Source:HGNC Symbol;Acc:HGNC:13201]
36. EZH1 ENSGALG00000003068 30 1 - - - - 1.000 - - - - - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3526]
37. HS6ST2 ENSGALG00000034250 42 1 - - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 2 [Source:NCBI gene;Acc:395150]
38. CYTH4 ENSGALG00000012454 12 1 - - - - 1.000 - - - - - cytohesin 4 [Source:NCBI gene;Acc:418043]
39. ENSGALG00000025727 ENSGALG00000025727 26 1 - - - - - - 1.000 - - -
40. ZEB2 ENSGALG00000040465 315 1 - - - - - - 1.000 - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
41. CHIC2 ENSGALG00000013931 21 1 - - - - - - 1.000 - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
42. PEAR1 ENSGALG00000028622 127 1 - - - - - - 1.000 - - - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
43. PEX5L ENSGALG00000043386 5 1 - - - - - - 1.000 - - - peroxisomal biogenesis factor 5 like [Source:HGNC Symbol;Acc:HGNC:30024]
44. LOC100858797 ENSGALG00000027167 7 1 - - - - - - 1.000 - - - feather keratin 1-like, transcript variant X1
45. CLDN18 ENSGALG00000006593 77 1 - - - - - - 1.000 - - - claudin 18 [Source:HGNC Symbol;Acc:HGNC:2039]
46. WNT3A ENSGALG00000042657 22 1 - - - - - - 1.000 - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
47. AIFM3 ENSGALG00000007720 28 1 - - - - - - 1.000 - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
48. UPK3B 4 1 - - - - 1.000 - - - - - uroplakin 3B
49. MEX3D ENSGALG00000001106 2 0.968 - - - - - 0.968 - - - - mex-3 RNA binding family member D, transcript variant X3
50. GPR156 ENSGALG00000014973 4 0.968 - - - - - 0.968 - - - - G protein-coupled receptor 156, transcript variant X4
51. HEPACAM2 ENSGALG00000009482 3 0.968 - - - - - 0.968 - - - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
52. IP3KA IP3KA 4 0.968 - - - - - 0.968 - - - -
53. SCARNA7 SCARNA7 2 0.968 - - - - - 0.968 - - - -
54. BNC1 ENSGALG00000006041 63 0.968 - - - - - 0.968 - - - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
55. KLHL28 ENSGALG00000012489 2 0.968 - - - - - 0.968 - - - - kelch like family member 28 [Source:HGNC Symbol;Acc:HGNC:19741]
56. NTRK2 ENSGALG00000012594 24 0.968 - - - - - 0.968 - - - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
57. ENSGALG00000022810 ENSGALG00000022810 1 0.968 - - - - - 0.968 - - - -
58. KCNK9 ENSGALG00000037285 1 0.968 - - - - - 0.968 - - - - potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
59. HELB ENSGALG00000009885 8 0.968 - - - - - 0.968 - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
60. PTPRT ENSGALG00000037889 5 0.968 - - - - - 0.968 - - - - protein tyrosine phosphatase, receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
61. LOC417973 ENSGALG00000019325 9 0.968 - - - - - 0.968 - - - - uncharacterized LOC417973, transcript variant X1
62. TG ENSGALG00000039509 19 0.968 - - - - - 0.968 - - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
63. STAR ENSGALG00000003242 4 0.968 - - - - - 0.968 - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
64. ENSGALG00000027371 ENSGALG00000027371 1 0.968 - - - - - 0.968 - - - -
65. CAD19 CAD19 17 0.968 - - - - - 0.968 - - - -
66. SLC47A2 ENSGALG00000004778 2 0.968 - - - - - 0.968 - - - - solute carrier family 47 member 2 [Source:NCBI gene;Acc:417616]
67. PPIL6 ENSGALG00000015237 11 0.968 - - - - - 0.968 - - - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
68. SLC5A12 ENSGALG00000013304 1 0.968 - - - - - 0.968 - - - - solute carrier family 5 member 12 [Source:HGNC Symbol;Acc:HGNC:28750]
69. SYNRG ENSGALG00000005468 27 0.968 - - - - - 0.968 - - - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
70. C8orf22 C8orf22 37 0.968 - - - - - 0.968 - - - -
71. GPR160 ENSGALG00000039989 1 0.968 - - - - - 0.968 - - - - G protein-coupled receptor 160 [Source:NCBI gene;Acc:424992]
72. AK7 ENSGALG00000011093 9 0.968 - - - - - 0.968 - - - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
73. CECR5 3 0.968 - - - - - 0.968 - - - - cat eye syndrome chromosome region, candidate 5, transcript variant X2
74. CMBL ENSGALG00000013033 3 0.968 - - - - - 0.968 - - - - carboxymethylenebutenolidase homolog, transcript variant X4
75. MST MST 9 0.968 - - - - - 0.968 - - - -
76. DMB1 ENSGALG00000000162 7 0.963 - - - - - 0.963 - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
77. SLC1A2 ENSGALG00000037556 22 0.962 - - - - - 0.962 - - - - solute carrier family 1 member 2 [Source:NCBI gene;Acc:423156]
78. DSE ENSGALG00000014963 70 0.962 - - - - - 0.962 - - - - dermatan sulfate epimerase, transcript variant X1
79. NCX3 NCX3 16 0.96 - - - - - 0.960 - - - -
80. ENSGALG00000012217 ENSGALG00000012217 8 0.943 - - - - - - 0.943 - - -
81. CAPN6 ENSGALG00000008006 16 0.936 - - 0.936 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
82. PLA1A ENSGALG00000014997 152 0.935 - - 0.935 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
83. MMP23B ENSGALG00000001392 53 0.933 - - - - - 0.933 - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
84. UIMC1 ENSGALG00000001158 22 0.931 - - 0.931 - - - - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
85. ZP2 ENSGALG00000002428 10 0.931 - - 0.931 - - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
86. GATA4 ENSGALG00000016662 6 0.93 - - 0.930 - - - - - - - GATA binding protein 4 [Source:NCBI gene;Acc:396392]
87. VEPH1 ENSGALG00000009682 51 0.93 - - 0.930 - - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
88. DENND6B ENSGALG00000043771 22 0.93 - - 0.930 - - - - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
89. CDCP1 ENSGALG00000040447 47 0.927 - - 0.927 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
90. KNDC1 ENSGALG00000007007 31 0.923 - - 0.923 - - - - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
91. PACRGL ENSGALG00000014406 18 0.918 - - - - - 0.918 - - - - parkin coregulated like [Source:HGNC Symbol;Acc:HGNC:28442]
92. CENPQ ENSGALG00000016692 293 0.918 - - 0.918 - - - - - - - centromere protein Q [Source:NCBI gene;Acc:422048]
93. PPL ENSGALG00000002201 13 0.917 - - - - - 0.917 - - - - periplakin
94. INF2 ENSGALG00000011608 36 0.915 - - - - - 0.915 - - - - inverted formin, FH2 and WH2 domain containing [Source:HGNC Symbol;Acc:HGNC:23791]
95. LPAR5 ENSGALG00000014455 10 0.912 - - - - - 0.912 - - - - lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
96. C1orf168 C1orf168 98 0.911 - - 0.911 - - - - - - -
97. ICMT ENSGALG00000024053 10 0.909 - - 0.909 - - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
98. PLEKHA1 ENSGALG00000034548 34 0.908 - - 0.908 - - - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
99. PQLC3 ENSGALG00000016449 39 0.905 - - - - - 0.905 - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
100. MDGA1 ENSGALG00000010145 13 0.905 - - - - - 0.905 - - - - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]

There are 227 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA