Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HDAC2

Gene Name Gene ID Reads Annotation
HDAC2 ENSGALG00000014991 23458 histone deacetylase 2 [Source:NCBI gene;Acc:395635]











Genes with expression patterns similar to HDAC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HDAC2 ENSGALG00000014991 23458 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
2. SP3 ENSGALG00000031796 8997 2.31 0.727 - 0.749 - - - - - - 0.834 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
3. FBXO5 ENSGALG00000013607 6156 1.77 - - - - - - - 0.913 - 0.857 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
4. WHSC1 1712 1.752 - - 0.783 - - - - - - 0.969 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
5. AGGF1 ENSGALG00000004311 3011 1.728 - - 0.781 - - - - - - 0.947 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
6. CNTRL ENSGALG00000001513 1773 1.714 - - 0.740 - - - - - - 0.974 centriolin [Source:NCBI gene;Acc:417121]
7. HYAL3 ENSGALG00000029000 712 1.689 - - 0.730 - - - - - - 0.959 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
8. SPDL1 ENSGALG00000001942 4403 1.686 - - 0.749 - - - - - - 0.937 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
9. TMEM115 ENSGALG00000026965 13050 1.683 - - - - - - - 0.807 - 0.876 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
10. PRPF38B ENSGALG00000001972 2009 1.681 - - 0.754 - - - - - - 0.927 pre-mRNA processing factor 38B
11. ATP6V0C ENSGALG00000009229 125870 1.68 - - 0.747 - - - - - - 0.933 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
12. SMC4 ENSGALG00000009553 15715 1.679 - - 0.726 - - - - - - 0.953 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
13. RAD50 ENSGALG00000006794 4308 1.676 - - 0.735 - - - - - - 0.941 RAD50 double strand break repair protein, transcript variant X4
14. SLK ENSGALG00000008318 2220 1.675 - - 0.791 - - - - - - 0.884 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
15. FZD6 ENSGALG00000030626 3336 1.658 - - 0.761 - - - - - - 0.897 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
16. CKAP2 ENSGALG00000017025 25020 1.654 - - 0.727 - - - - - - 0.927 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
17. WBP4 ENSGALG00000016949 5858 1.65 - - 0.823 - - - - - - 0.827 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
18. NAA30 ENSGALG00000012098 4681 1.647 - - 0.730 - - - - - - 0.917 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
19. ENSGALG00000028992 ENSGALG00000028992 185077 1.646 - - - - - - - 0.766 - 0.880
20. CAMSAP1 ENSGALG00000001692 2617 1.634 - - 0.745 - - - - - - 0.889 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
21. CDH5 ENSGALG00000032349 8526 1.634 - - - - - - - 0.882 - 0.752 cadherin 5 [Source:NCBI gene;Acc:374068]
22. TMLHE ENSGALG00000007443 3619 1.621 - - 0.703 - - - - - - 0.918 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
23. CTSO ENSGALG00000009373 4186 1.615 - - - - - - - 0.735 - 0.880 cathepsin O [Source:NCBI gene;Acc:422410]
24. PRMT7 ENSGALG00000038865 2666 1.615 - - 0.707 - - - - 0.908 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
25. QSER1 ENSGALG00000012030 4490 1.61 - - 0.832 - - - - - - 0.778 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
26. TPX2 ENSGALG00000006267 26087 1.598 - - 0.702 - - - - - - 0.896 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
27. SMC5 ENSGALG00000015118 1799 1.594 - - 0.759 - - - - - - 0.835 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
28. CCNA2 ENSGALG00000011881 2574 1.594 - - 0.706 - - - - - - 0.888 cyclin A2 [Source:NCBI gene;Acc:396172]
29. LSM6 ENSGALG00000009985 18582 1.565 - - - - - - - 0.740 - 0.825 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
30. MYCBP2 ENSGALG00000016915 2374 1.531 - - 0.732 - - - - - - 0.799 MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
31. ADIPOR2 ENSGALG00000035533 6523 1.52 - - 0.742 - - - - - - 0.778 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
32. RPL26 RPL26 343071 1.52 - - 0.714 - - - - - - 0.806
33. THOC2 ENSGALG00000008507 9501 1.514 0.713 - 0.801 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
34. ZC3H11A ENSGALG00000000541 2712 1.506 - - 0.757 - - - - - - 0.749 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
35. MYO5A ENSGALG00000031987 2469 1.504 - - 0.701 - - - - - - 0.803 myosin VA [Source:NCBI gene;Acc:396237]
36. TIAR TIAR 2471 1.491 - - 0.749 - - - - - - 0.742
37. RBBP8 ENSGALG00000014982 3255 1.473 - - 0.708 - - - - - - 0.765 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
38. RALGDS ENSGALG00000003412 4478 1.47 - - 0.765 - - - 0.705 - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
39. TBX3 ENSGALG00000036043 2888 1.466 - - 0.708 - - - - - - 0.758 T-box 3 [Source:NCBI gene;Acc:374202]
40. BTG1L ENSGALG00000004676 2293 1.459 - - 0.709 - - - - - - 0.750 protein BTG1-like
41. UBN1 ENSGALG00000031416 2848 1.435 - - 0.710 - - - - - - 0.725 ubinuclein 1 [Source:NCBI gene;Acc:416398]
42. ARG2 ENSGALG00000009519 19523 1.427 - - - - - - 0.703 - - 0.724 arginase 2 [Source:NCBI gene;Acc:423272]
43. RTN4 ENSGALG00000029261 45730 0.996 - - - - - - 0.996 - - - reticulon 4 [Source:NCBI gene;Acc:378790]
44. MRPS18C ENSGALG00000023191 6293 0.994 - - - - - - 0.994 - - - mitochondrial ribosomal protein S18C [Source:NCBI gene;Acc:770813]
45. BRD1 ENSGALG00000029379 6047 0.972 - - - - - - - - - 0.972 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
46. C10orf118 C10orf118 762 0.971 - - - - - - - - - 0.971
47. FRMD3 ENSGALG00000012577 999 0.97 - - - - - - - - - 0.970 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
48. INTS10 ENSGALG00000010130 6320 0.97 - - - - - - - - - 0.970 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
49. AURKA ENSGALG00000007768 793 0.968 - - - - - - - - - 0.968 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
50. FSTL4 ENSGALG00000031487 529 0.968 - - - - - - - - - 0.968 follistatin like 4 [Source:NCBI gene;Acc:395163]
51. SSH1 ENSGALG00000004928 222 0.968 - - - - - - - - - 0.968 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
52. FAM129A ENSGALG00000004812 269 0.968 - - - - - - - - - 0.968 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
53. PM20D2 ENSGALG00000015779 1301 0.967 - - - - - - - - - 0.967 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
54. ASB9 ENSGALG00000016563 2780 0.967 - - - - - - - - - 0.967 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
55. IL10R2 IL10R2 72 0.967 - - - - - - - - - 0.967
56. ITGA9 ENSGALG00000029378 415 0.966 - - - - - - - - - 0.966 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
57. WDSUB1 ENSGALG00000012574 2038 0.966 - - - - - - - - - 0.966 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
58. FAM190B FAM190B 165 0.966 - - - - - - - - - 0.966
59. ZNF6 ZNF6 138 0.966 - - - - - - - - - 0.966
60. CPNE2 ENSGALG00000001316 236 0.966 - - - - - - - - - 0.966 copine 2 [Source:NCBI gene;Acc:415646]
61. ITSN2 ENSGALG00000016504 651 0.965 - - - - - - - - - 0.965 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
62. 5S_2 5S_2 58 0.965 - - - - - - - - - 0.965
63. CDH1-A CDH1-A 343 0.965 - - - - - - - - - 0.965
64. ASB3 ENSGALG00000008176 5422 0.965 - - - - - - - - - 0.965 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
65. TTC19 ENSGALG00000004416 1875 0.964 - - - - - - - - - 0.964 tetratricopeptide repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:26006]
66. PLA2G15 ENSGALG00000041787 762 0.964 - - - - - - - - - 0.964 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
67. CXADR ENSGALG00000015701 96 0.964 - - - - - - - - - 0.964 coxsackie virus and adenovirus receptor, transcript variant X2
68. HAUS8 ENSGALG00000003727 351 0.964 - - - - - - - - - 0.964 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
69. FREM3 ENSGALG00000020561 1824 0.963 - - - - - - - - - 0.963 FRAS1 related extracellular matrix 3
70. APBA3 ENSGALG00000000740 1249 0.963 - - - - - - - - - 0.963 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
71. MPRIP ENSGALG00000004798 6700 0.963 - - - - - - - - - 0.963 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
72. NARS ENSGALG00000040506 9506 0.963 - - - - - - - - - 0.963 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
73. SOX6 ENSGALG00000006074 102 0.963 - - - - - - - - - 0.963 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
74. CCT8 ENSGALG00000015821 12161 0.962 - - - - - - - - - 0.962 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
75. MSI1 ENSGALG00000007227 2279 0.962 - - - - - - - - - 0.962 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
76. PREX2 ENSGALG00000042354 134 0.962 - - - - - - - - - 0.962 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
77. CRYM ENSGALG00000002484 3558 0.962 - - - - - - - - - 0.962 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
78. CLSPN ENSGALG00000002346 2590 0.962 - - - - - - - - - 0.962 claspin [Source:NCBI gene;Acc:428223]
79. CASKIN1 604 0.962 - - - - - - - - - 0.962 CASK interacting protein 1, transcript variant X4
80. FBLIM1 ENSGALG00000003636 1498 0.962 - - - - - - - - - 0.962 filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
81. RTN4R ENSGALG00000007732 1515 0.961 - - - - - - - - - 0.961 reticulon 4 receptor
82. PCLO 249 0.961 - - - - - - - - - 0.961 piccolo presynaptic cytomatrix protein
83. GXYLT1 ENSGALG00000009532 5682 0.961 - - - - - - - - - 0.961 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
84. ERI2 1087 0.96 - - - - - - - - - 0.960 ERI1 exoribonuclease family member 2, transcript variant X1
85. HEXA ENSGALG00000043828 4789 0.96 - - - - - - - - - 0.960 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
86. CPNE1 ENSGALG00000040856 610 0.959 - - - - - - - - - 0.959 copine 1 [Source:NCBI gene;Acc:419134]
87. SMARCC1 ENSGALG00000032642 4842 0.959 - - - - - - - - - 0.959 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
88. ARHGAP21 ENSGALG00000007721 3961 0.959 - - - - - - - - - 0.959 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
89. TP53BP1 ENSGALG00000042201 708 0.959 - - - - - - - - - 0.959 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
90. ESRRG ENSGALG00000009645 2783 0.958 - - - - - - - - - 0.958 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
91. SLC39A13 ENSGALG00000008122 2003 0.958 - - - - - - - - - 0.958 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
92. DIAPH3 ENSGALG00000016937 1069 0.957 - - - - - - - - - 0.957 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
93. ASAP2 ENSGALG00000016419 1393 0.957 - - - - - - - - - 0.957 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
94. GRK4 ENSGALG00000015645 1065 0.957 - - - - - - - - - 0.957 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
95. SGSH ENSGALG00000007027 1115 0.957 - - - - - - - - - 0.957 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
96. TBC1D19 ENSGALG00000029673 1868 0.956 - - - - - - - - - 0.956 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
97. TMEM237 ENSGALG00000008381 1317 0.956 - - - - - - - - - 0.956 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
98. FBXO21 ENSGALG00000008201 2608 0.956 - - - - - - - - - 0.956 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
99. PROM1 ENSGALG00000014496 2494 0.955 - - - - - - - - - 0.955 prominin 1 [Source:NCBI gene;Acc:422825]
100. MTSS1 ENSGALG00000041969 1312 0.955 - - - - - - - - - 0.955 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]

There are 704 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA