Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HDAC1

Gene Name Gene ID Reads Annotation
HDAC1 ENSGALG00000003297 3528 histone deacetylase 1 [Source:NCBI gene;Acc:373961]











Genes with expression patterns similar to HDAC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HDAC1 ENSGALG00000003297 3528 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 histone deacetylase 1 [Source:NCBI gene;Acc:373961]
2. ENTPD4 ENSGALG00000000390 1394 1.718 - - - - - - 0.842 0.876 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
3. BRCA1 ENSGALG00000002781 2052 1.691 - - - - - - 0.767 0.924 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
4. CREBL2 ENSGALG00000037030 1247 1.605 - - - - - - 0.760 0.845 - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
5. CCDC117 ENSGALG00000005784 185 1.602 - - - - - - 0.701 0.901 - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
6. SLC19A1 ENSGALG00000030511 1397 0.938 - - - - - - - 0.938 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
7. ATP1B3 ENSGALG00000002764 1890 0.934 - - - - - - - 0.934 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
8. MURC 3759 0.932 - - - - - - - 0.932 - - muscle related coiled-coil protein
9. SPATA2 ENSGALG00000008026 2040 0.93 - - - - - - - 0.930 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
10. MTIF2 ENSGALG00000031265 2366 0.93 - - - - - - - 0.930 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
11. RCAN3 ENSGALG00000004282 7778 0.928 - - - - - - - 0.928 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
12. RASA3 ENSGALG00000016817 2146 0.927 - - - - - - - 0.927 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
13. DOCK10 ENSGALG00000005030 848 0.925 - - - - - - - 0.925 - - dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479]
14. AIP ENSGALG00000040247 4166 0.925 - - - - - - - 0.925 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
15. TXNDC11 ENSGALG00000003154 2224 0.924 - - - - - - - 0.924 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
16. LIMS1 ENSGALG00000029970 7244 0.923 - - - - - - - 0.923 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
17. NCAPH ENSGALG00000032270 2103 0.92 - - - - - - - 0.920 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
18. NT5C3B ENSGALG00000003651 5190 0.918 - - - - - - - 0.918 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
19. TAF5 ENSGALG00000008241 5227 0.918 - - - - - - - 0.918 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
20. CCNL2 ENSGALG00000001551 2620 0.914 - - - - - - - 0.914 - - cyclin L2 [Source:NCBI gene;Acc:395124]
21. CLCN5 ENSGALG00000007234 1143 0.913 - - - - - - - 0.913 - - chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
22. ZNF750 ENSGALG00000001518 151 0.913 - - - - - - - 0.913 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
23. FBXL17 ENSGALG00000000276 2443 0.913 - - - - - - - 0.913 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
24. KIAA1009 KIAA1009 1261 0.911 - - - - - - - 0.911 - -
25. BUD13 ENSGALG00000025882 1800 0.911 - - - - - - - 0.911 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
26. AGRN ENSGALG00000039193 8135 0.911 - - - - - - - 0.911 - - agrin [Source:NCBI gene;Acc:396538]
27. ABHD12B ENSGALG00000020342 511 0.91 - - - - - - - 0.910 - - abhydrolase domain containing 12B, transcript variant X2
28. APBB2 ENSGALG00000014262 569 0.91 - - - - - - - 0.910 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
29. BACE2 ENSGALG00000034932 1570 0.91 - - - - - - - 0.910 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
30. CCDC80 ENSGALG00000015193 1387 0.908 - - - - - - - 0.908 - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
31. NUDT6 ENSGALG00000011834 1309 0.907 - - - - - - - 0.907 - - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
32. RIMKLB ENSGALG00000040184 281 0.907 - - - - - - - 0.907 - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
33. LRIG3 ENSGALG00000009755 6655 0.907 - - - - - - - 0.907 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
34. TMEM161A ENSGALG00000025809 2813 0.906 - - - - - - - 0.906 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
35. HOOK1 ENSGALG00000010889 1007 0.906 - - - - - - - 0.906 - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
36. HAGHL ENSGALG00000021040 1568 0.906 - - - - - - - 0.906 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
37. ITFG1 ENSGALG00000004049 2934 0.905 - - - - - - - 0.905 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
38. ASTN2 ENSGALG00000007038 1748 0.904 - - - - - - - 0.904 - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
39. TAF1A ENSGALG00000009441 2431 0.904 - - - - - - - 0.904 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
40. PDZD8 ENSGALG00000029095 1068 0.904 - - - - - - - 0.904 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
41. EML1 1941 0.904 - - - - - - - 0.904 - - echinoderm microtubule associated protein like 1, transcript variant X11
42. SLC25A28 ENSGALG00000007479 4902 0.904 - - - - - - - 0.904 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
43. VPS13D ENSGALG00000034777 2350 0.903 - - - - - - - 0.903 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
44. UBN1 ENSGALG00000031416 2848 0.903 - - - - - - - 0.903 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
45. TICAM1 ENSGALG00000026850 723 0.902 - - - - - - - 0.902 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
46. G2E3 ENSGALG00000009907 1754 0.901 - - - - - - - 0.901 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
47. SMG8 ENSGALG00000005093 5557 0.901 - - - - - - - 0.901 - - SMG8 nonsense mediated mRNA decay factor
48. NPAT ENSGALG00000017162 1574 0.901 - - - - - - - 0.901 - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
49. ARNTL2 ENSGALG00000014096 998 0.899 - - - - - - - 0.899 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
50. DMA DMA 1012 0.899 - - - - - - - 0.899 - -
51. PPP2R3A ENSGALG00000034512 1091 0.898 - - - - - - - 0.898 - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
52. MAOB ENSGALG00000032836 1054 0.898 - - - - - - - 0.898 - - monoamine oxidase B
53. NRG1 ENSGALG00000015422 196 0.897 - - - - - - - 0.897 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
54. GLT8D1 ENSGALG00000001642 4232 0.897 - - - - - - - 0.897 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
55. PAIP1 ENSGALG00000014867 202 0.895 - - - - - - - 0.895 - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
56. SRR ENSGALG00000003155 93 0.895 - - - - - - - 0.895 - - serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
57. NPR2 ENSGALG00000027630 871 0.895 - - - - - - - 0.895 - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
58. HSD17B7 ENSGALG00000037852 4750 0.894 - - - - - - - 0.894 - - hydroxysteroid 17-beta dehydrogenase 7 [Source:NCBI gene;Acc:424367]
59. SPATA2L ENSGALG00000044991 463 0.894 - - - - - - - 0.894 - - spermatogenesis associated 2 like [Source:HGNC Symbol;Acc:HGNC:28393]
60. RBM46 ENSGALG00000009278 98 0.894 - - - - - - - 0.894 - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
61. CRABP2 ENSGALG00000029140 559 0.893 - - - - - - - 0.893 - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
62. ENSGALG00000021439 ENSGALG00000021439 628 0.893 - - - - - - - 0.893 - -
63. EPGN ENSGALG00000010859 187 0.891 - - - - - - - 0.891 - - epithelial mitogen [Source:NCBI gene;Acc:497270]
64. ZBTB18 ENSGALG00000010705 3433 0.891 - - - - - - - 0.891 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
65. RFX7 ENSGALG00000041896 69 0.89 - - - - - - - 0.890 - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
66. TRPC1 ENSGALG00000002639 296 0.89 - - - - - - - 0.890 - - transient receptor potential cation channel subfamily C member 1 [Source:NCBI gene;Acc:424776]
67. ENSGALG00000011233 ENSGALG00000011233 42 0.89 - - - - - - - 0.890 - -
68. PNN ENSGALG00000010167 6417 0.889 - - - - - - - 0.889 - - pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
69. KLF6 ENSGALG00000033178 679 0.888 - - - - - - - 0.888 - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
70. KIF21B ENSGALG00000034347 4144 0.888 - - - - - - - 0.888 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
71. TTC38 ENSGALG00000014551 1135 0.888 - - - - - - - 0.888 - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
72. PKN3 532 0.887 - - - - - - - 0.887 - - protein kinase N3, transcript variant X2
73. USP28 ENSGALG00000006969 2645 0.887 - - - - - - - 0.887 - - ubiquitin specific peptidase 28 [Source:NCBI gene;Acc:428246]
74. FGFR1 ENSGALG00000039786 4480 0.886 - - - - - - - 0.886 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
75. GKAP1 ENSGALG00000012586 2908 0.886 - - - - - - - 0.886 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
76. GP1BB ENSGALG00000021529 348 0.885 - - - - - - - 0.885 - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
77. MMP15 ENSGALG00000038758 49988 0.885 - - - - - - - 0.885 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
78. ANGPTL1 ENSGALG00000004290 1922 0.885 - - - - - - - 0.885 - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
79. NPL ENSGALG00000004614 617 0.883 - - - - - - - 0.883 - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
80. MXD4 ENSGALG00000015688 1472 0.883 - - - - - - - 0.883 - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
81. TPM3 ENSGALG00000013537 934 0.883 - - - - - - - 0.883 - - Gallus gallus tropomyosin 3 (TPM3), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352039]
82. BIVM ENSGALG00000016861 3987 0.882 - - - - - - - 0.882 - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
83. SH3TC1 ENSGALG00000015568 484 0.881 - - - - - - - 0.881 - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
84. DOK5 ENSGALG00000007786 1732 0.88 - - - - - - - 0.880 - - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
85. ITFG2 ENSGALG00000014335 1896 0.88 - - - - - - - 0.880 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
86. FBXO7 ENSGALG00000012569 4124 0.879 - - - - - - - 0.879 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
87. ALAS1 3660 0.878 - - - - - - - 0.878 - - 5'-aminolevulinate synthase 1, transcript variant X1
88. PCYOX1 ENSGALG00000013878 2200 0.877 - - - - - - - 0.877 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
89. PECR ENSGALG00000011497 1714 0.876 - - - - - - - 0.876 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
90. AGGF1 ENSGALG00000004311 3011 0.876 - - - - - - - 0.876 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
91. ENSGALG00000018634 ENSGALG00000018634 414 0.876 - - - - - - - 0.876 - -
92. LRPAP1 ENSGALG00000015612 3526 0.876 - - - - - - - 0.876 - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
93. ACBD5 ENSGALG00000007519 1646 0.875 - - - - - - - 0.875 - - acyl-CoA binding domain containing 5 [Source:NCBI gene;Acc:420488]
94. CREPT CREPT 17142 0.875 - - - - - - - 0.875 - -
95. FBXL8 ENSGALG00000003201 847 0.875 - - - - - - - 0.875 - - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
96. RNASEH1 ENSGALG00000016389 2694 0.875 - - - - - - - 0.875 - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
97. TCTN2 ENSGALG00000023683 3596 0.874 - - - - - - - 0.874 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
98. MTUS1 ENSGALG00000013615 1040 0.874 - - - - - - - 0.874 - - microtubule associated tumor suppressor 1, transcript variant X4
99. CPT2 ENSGALG00000010681 3211 0.874 - - - - - - - 0.874 - - carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
100. NDRG3 ENSGALG00000001492 5919 0.872 - - - - - - - 0.872 - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]

There are 199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA