Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HCRT

Gene Name Gene ID Reads Annotation
HCRT ENSGALG00000011485 62 hypocretin neuropeptide precursor [Source:NCBI gene;Acc:374005]











Genes with expression patterns similar to HCRT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HCRT ENSGALG00000011485 62 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 hypocretin neuropeptide precursor [Source:NCBI gene;Acc:374005]
2. ST8SIA5 ENSGALG00000035927 4 1 - - - - - - - 1.000 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:NCBI gene;Acc:414797]
3. TMX1 ENSGALG00000020340 6 1 - - - - - - - 1.000 - - thioredoxin related transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:15487]
4. ABCB1LB ABCB1LB 4 1 - - - - - - - 1.000 - -
5. ATF6 ENSGALG00000032278 71 1 - - - - - - - 1.000 - - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
6. FAM160A2 ENSGALG00000003416 23 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
7. CHST9 ENSGALG00000019489 21 1 - - - - - - - 1.000 - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
8. ANKRD27 ENSGALG00000004671 26 1 - - - - - - - 1.000 - - ankyrin repeat domain 27 [Source:NCBI gene;Acc:415766]
9. TMC3 ENSGALG00000006376 12 1 - - - - - - - 1.000 - - transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
10. BRD8 ENSGALG00000037646 100 1 - - - - - - - 1.000 - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
11. PROSER1 ENSGALG00000017038 8 1 - - - - - - - 1.000 - - proline and serine rich 1 [Source:HGNC Symbol;Acc:HGNC:20291]
12. C9orf3 C9orf3 47 0.99 - - - - - - - 0.990 - -
13. TRMT13 ENSGALG00000005290 95 0.95 - - - - - - - 0.950 - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
14. RNF151 ENSGALG00000034803 16 0.95 - - - - - - - 0.950 - - ring finger protein 151, transcript variant X2
15. NKX2-8 ENSGALG00000028483 174 0.944 - - - - - - - 0.944 - - NK2 homeobox 8 [Source:HGNC Symbol;Acc:HGNC:16364]
16. CLDN12 ENSGALG00000009038 16 0.943 - - - - - - - 0.943 - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
17. MMR1L3 ENSGALG00000008638 26 0.938 - - - - - - - 0.938 - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
18. MSGN1 ENSGALG00000016469 17 0.93 - - - - - - - 0.930 - - mesogenin 1 [Source:NCBI gene;Acc:395419]
19. GMPR ENSGALG00000012705 30 0.922 - - - - - - - 0.922 - - guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
20. FBXL4 ENSGALG00000015490 12 0.917 - - - - - - - 0.917 - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
21. ENSGALG00000016214 ENSGALG00000016214 26 0.912 - - - - - - - 0.912 - -
22. SLC35F5 ENSGALG00000012166 25 0.91 - - - - - - - 0.910 - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
23. gga-mir-6585 ENSGALG00000027202 102 0.91 - - - - - - - 0.910 - - gga-mir-6585 [Source:miRBase;Acc:MI0022405]
24. LAMB4 ENSGALG00000007917 54 0.905 - - - - - - - 0.905 - - laminin subunit beta 4 [Source:NCBI gene;Acc:396076]
25. P2RY1 ENSGALG00000010357 11 0.903 - - - - - - 0.903 - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
26. ALOX5AP ENSGALG00000026781 28 0.894 - - - - - - - 0.894 - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
27. EFCC1 ENSGALG00000005024 51 0.891 - - - - - - - 0.891 - - EF-hand and coiled-coil domain containing 1, transcript variant X6
28. WDR65 WDR65 26 0.882 - - - - - - - - - 0.882
29. gga-mir-2954 ENSGALG00000026107 462 0.878 - - - - - - 0.878 - - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
30. FRK ENSGALG00000014979 65 0.87 - - - - - - - 0.870 - - fyn related Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3955]
31. C8H1ORF52 C8H1ORF52 118 0.867 - - - - - - - 0.867 - -
32. GNG4 ENSGALG00000010986 23 0.846 - - - - - - 0.846 - - - G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
33. LRRC1 ENSGALG00000016304 21 0.846 - - - - - - 0.846 - - - leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
34. DSE ENSGALG00000014963 70 0.846 - - - - - - 0.846 - - - dermatan sulfate epimerase, transcript variant X1
35. RCBTB2 ENSGALG00000017000 3 0.846 - - - - - - 0.846 - - - RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]
36. FGL2 ENSGALG00000008306 15 0.846 - - - - - - 0.846 - - - fibrinogen like 2 [Source:NCBI gene;Acc:768821]
37. FAM196A 5 0.846 - - - - - - 0.846 - - - family with sequence similarity 196 member A, transcript variant X6
38. CD109 ENSGALG00000015910 11 0.846 - - - - - - 0.846 - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
39. TMEM72 ENSGALG00000026808 5 0.846 - - - - - - 0.846 - - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
40. EPYC ENSGALG00000011269 17 0.846 - - - - - - 0.846 - - - epiphycan [Source:NCBI gene;Acc:417890]
41. PALB2 ENSGALG00000006078 1549 0.846 - - - - - - 0.846 - - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
42. VCAM1 ENSGALG00000005257 102 0.846 - - - - - - 0.846 - - - vascular cell adhesion molecule 1, transcript variant X1
43. TMEM181 ENSGALG00000013737 19 0.846 - - - - - - 0.846 - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
44. ENSGALG00000009151 ENSGALG00000009151 6 0.846 - - - - - - 0.846 - - -
45. PINLYP ENSGALG00000026884 23 0.846 - - - - - - 0.846 - - - phospholipase A2 inhibitor and LY6/PLAUR domain containing
46. CCND2 ENSGALG00000017283 38 0.846 - - - - - - 0.846 - - - cyclin D2 [Source:NCBI gene;Acc:374047]
47. A4GNT ENSGALG00000006600 11 0.846 - - - - - - 0.846 - - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
48. TEKT5 ENSGALG00000007257 5 0.846 - - - - - - 0.846 - - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
49. DNAH5 ENSGALG00000012997 28 0.846 - - - - - - 0.846 - - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
50. PRKAA2 ENSGALG00000010826 2 0.846 - - - - - - 0.846 - - - protein kinase AMP-activated catalytic subunit alpha 2 [Source:NCBI gene;Acc:429110]
51. GPR85 ENSGALG00000009439 23 0.846 - - - - - - 0.846 - - - G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
52. C11ORF61 C11ORF61 41 0.846 - - - - - - 0.846 - - -
53. ACN9 ACN9 269 0.835 - - - - - - - 0.835 - -
54. SDCBP ENSGALG00000015436 1228 0.828 - - - - - - 0.828 - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
55. ENSGALG00000004753 ENSGALG00000004753 63 0.817 - - - - - - 0.817 - - -
56. LOC769668 ENSGALG00000021450 31 0.815 - - - - - - 0.815 - - - estradiol 17-beta-dehydrogenase 2-like
57. CHST3 ENSGALG00000024056 308 0.806 - - - - - - - 0.806 - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
58. CGTL ENSGALG00000012847 2 0.805 - - - - - 0.805 - - - - cystine/glutamate transporter-like, transcript variant X5
59. TG ENSGALG00000039509 19 0.803 - - - - - - 0.803 - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
60. GYPC ENSGALG00000011566 99 0.802 - - - - - - - 0.802 - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
61. NFXL1 ENSGALG00000014138 36 0.802 - - - - - - - 0.802 - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
62. ABHD3 ENSGALG00000014938 9 0.792 - - - - - - - 0.792 - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
63. CD200R1A CD200R1A 105 0.787 - - - - - - 0.787 - - -
64. AOAH ENSGALG00000035505 6 0.784 - - - - - - - - - 0.784 acyloxyacyl hydrolase [Source:HGNC Symbol;Acc:HGNC:548]
65. ZNF608 ENSGALG00000005016 273 0.781 - - - - - - - 0.781 - - zinc finger protein 608 [Source:HGNC Symbol;Acc:HGNC:29238]
66. TCEANC2 ENSGALG00000010749 162 0.779 - - - - - - - 0.779 - - transcription elongation factor A N-terminal and central domain containing 2 [Source:NCBI gene;Acc:424657]
67. ADRA1D ENSGALG00000038787 54 0.773 - - - - - - - 0.773 - - adrenoceptor alpha 1D
68. CP ENSGALG00000030773 119 0.77 - - - - - - 0.770 - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
69. DUSP14 ENSGALG00000027641 3662 0.769 - - 0.769 - - - - - - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
70. HEXDCL ENSGALG00000005861 172 0.769 - - - - - - 0.769 - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing-like, transcript variant X10
71. TADA3 ENSGALG00000006688 27 0.766 - - - - - - - 0.766 - - transcriptional adaptor 3 [Source:HGNC Symbol;Acc:HGNC:19422]
72. SMARCAD1 ENSGALG00000037339 149 0.765 - - - - - - - 0.765 - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
73. ENSGALG00000026213 ENSGALG00000026213 562 0.762 - - - - - - - 0.762 - -
74. MATN3 ENSGALG00000016478 10 0.758 - - - - - 0.758 - - - - matrilin 3 [Source:NCBI gene;Acc:395954]
75. SLC8B1 ENSGALG00000008337 42 0.756 - - - - - - 0.756 - - - solute carrier family 8 member B1 [Source:HGNC Symbol;Acc:HGNC:26175]
76. TCTE1 ENSGALG00000010165 65 0.754 - - - - - - - 0.754 - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
77. GHR ENSGALG00000014855 131 0.752 - - - - - - 0.752 - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
78. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.751 - - - - - - 0.751 - - - family with sequence similarity 214 member B, transcript variant X14
79. CPE ENSGALG00000027788 153 0.749 - - - - - - - 0.749 - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
80. NTL ENSGALG00000005156 278 0.745 - - - - - - - 0.745 - - neurotrypsin-like, transcript variant X7
81. GPR18 ENSGALG00000022750 36 0.744 - - - - - - 0.744 - - - G protein-coupled receptor 18 [Source:HGNC Symbol;Acc:HGNC:4472]
82. NMRK2 ENSGALG00000025751 57 0.742 - - - - - - 0.742 - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
83. SLC35D3 ENSGALG00000030545 55 0.738 - - 0.738 - - - - - - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
84. ADAL ENSGALG00000004038 113 0.738 - - - - - - - - - 0.738 adenosine deaminase like [Source:NCBI gene;Acc:415391]
85. FGF20 ENSGALG00000013663 20 0.733 - - - - - - 0.733 - - - fibroblast growth factor 20 [Source:HGNC Symbol;Acc:HGNC:3677]
86. ENSGALG00000013079 ENSGALG00000013079 12 0.731 - - - - - - - 0.731 - -
87. DCLK1 ENSGALG00000041263 40 0.729 - - - - - - 0.729 - - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
88. ADORA1 ENSGALG00000000168 43 0.722 - - - - - - 0.722 - - - adenosine A1 receptor [Source:NCBI gene;Acc:374212]
89. DUSP11RC1I ENSGALG00000020775 57 0.722 - - - - - - 0.722 - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting), transcript variant X12
90. HAO1 ENSGALG00000008845 22 0.722 - - - - - - 0.722 - - - hydroxyacid oxidase 1 [Source:NCBI gene;Acc:416728]
91. ZMYND19 ENSGALG00000008798 1599 0.715 - - - - - - - 0.715 - - zinc finger MYND-type containing 19 [Source:NCBI gene;Acc:395088]
92. TGIF2 ENSGALG00000024081 21 0.714 - - - - - - - 0.714 - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
93. SLC38A4 ENSGALG00000009730 15 0.709 - - - - - - - 0.709 - - solute carrier family 38 member 4 [Source:NCBI gene;Acc:417809]
94. TACR3 ENSGALG00000010596 31 0.707 - - - - - - - - - 0.707 Gallus gallus tachykinin receptor 3 (TACR3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318454]
95. FMNL2 ENSGALG00000012525 78 0.705 - - - - - - 0.705 - - - formin like 2 [Source:HGNC Symbol;Acc:HGNC:18267]
96. ELMSAN1 ENSGALG00000009282 79 0.705 - - - - - - 0.705 - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
97. TICRR ENSGALG00000006631 495 0.704 - - - - - - 0.704 - - - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
98. MTHFS ENSGALG00000006516 405 0.704 - - - - - - 0.704 - - - methenyltetrahydrofolate synthetase [Source:NCBI gene;Acc:415484]
99. SH3RF1 ENSGALG00000009692 46 0.703 - - - - - - 0.703 - - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
100. SPOP ENSGALG00000009939 670 0.703 - - - - - - 0.703 - - - speckle type BTB/POZ protein [Source:HGNC Symbol;Acc:HGNC:11254]

There are 5 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA