Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for H3f3b

Gene Name Gene ID Reads Annotation
H3f3b ENSMUSG00000016559 37027 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]







Genes with expression patterns similar to H3f3b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. H3f3b ENSMUSG00000016559 37027 6 1.000 1.000 1.000 1.000 1.000 1.000 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
2. Rabgap1 ENSMUSG00000035437 4628 1.838 0.957 - - - - 0.881 RAB GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:2385139]
3. Nr2f1 ENSMUSG00000069171 10292 1.618 - 0.827 - - - 0.791 nuclear receptor subfamily 2, group F, member 1 [Source:MGI Symbol;Acc:MGI:1352451]
4. Rps6ka6 ENSMUSG00000025665, ENSMUSG00000116203 6507 1.613 - 0.803 - - - 0.810 ribosomal protein S6 kinase polypeptide 6 [Source:MGI Symbol;Acc:MGI:1914321]
5. Eif5a ENSMUSG00000078812 71171 1.586 0.879 0.707 - - - - eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
6. Zic5 ENSMUSG00000041703 1240 1.569 - 0.781 - - - 0.788 zinc finger protein of the cerebellum 5 [Source:MGI Symbol;Acc:MGI:1929518]
7. Zfp260 ENSMUSG00000049421 5404 1.506 - 0.763 - - - 0.743 zinc finger protein 260 [Source:MGI Symbol;Acc:MGI:1347071]
8. Psip1 ENSMUSG00000028484 15380 0.965 0.965 - - - - - PC4 and SFRS1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2142116]
9. Anp32e ENSMUSG00000015749 13671 0.963 0.963 - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:MGI Symbol;Acc:MGI:1913721]
10. Ivns1abp ENSMUSG00000023150 9971 0.963 0.963 - - - - - influenza virus NS1A binding protein [Source:MGI Symbol;Acc:MGI:2152389]
11. Ubqln2 ENSMUSG00000050148 5374 0.962 0.962 - - - - - ubiquilin 2 [Source:MGI Symbol;Acc:MGI:1860283]
12. Glg1 ENSMUSG00000003316 8749 0.961 0.961 - - - - - golgi apparatus protein 1 [Source:MGI Symbol;Acc:MGI:104967]
13. Clip1 ENSMUSG00000049550 5759 0.96 0.960 - - - - - CAP-GLY domain containing linker protein 1 [Source:MGI Symbol;Acc:MGI:1928401]
14. Ddx3x ENSMUSG00000000787 27968 0.959 0.959 - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
15. Snrpb2 ENSMUSG00000008333 7592 0.959 0.959 - - - - - U2 small nuclear ribonucleoprotein B [Source:MGI Symbol;Acc:MGI:104805]
16. Xbp1 ENSMUSG00000020484 6209 0.958 0.958 - - - - - X-box binding protein 1 [Source:MGI Symbol;Acc:MGI:98970]
17. Cebpz ENSMUSG00000024081 3514 0.957 0.957 - - - - - CCAAT/enhancer binding protein zeta [Source:MGI Symbol;Acc:MGI:109386]
18. Snrpb ENSMUSG00000027404 20831 0.957 0.957 - - - - - small nuclear ribonucleoprotein B [Source:MGI Symbol;Acc:MGI:98342]
19. Rpl13a ENSMUSG00000074129 29575 0.957 0.957 - - - - - ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
20. Mex3d ENSMUSG00000048696 2206 0.957 0.957 - - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
21. Aida ENSMUSG00000042901 4507 0.957 0.957 - - - - - axin interactor, dorsalization associated [Source:MGI Symbol;Acc:MGI:1919737]
22. Snx4 ENSMUSG00000022808 4583 0.956 0.956 - - - - - sorting nexin 4 [Source:MGI Symbol;Acc:MGI:1916400]
23. Dph6 ENSMUSG00000057147 3784 0.956 0.956 - - - - - diphthamine biosynthesis 6 [Source:MGI Symbol;Acc:MGI:1913882]
24. Rbm5 ENSMUSG00000032580 7538 0.956 0.956 - - - - - RNA binding motif protein 5 [Source:MGI Symbol;Acc:MGI:1933204]
25. Hnrnpul1 ENSMUSG00000040725 4933 0.955 0.955 - - - - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:MGI Symbol;Acc:MGI:2443517]
26. Ppfia1 ENSMUSG00000037519 3319 0.955 0.955 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:MGI Symbol;Acc:MGI:1924750]
27. B830012L14Rik ENSMUSG00000098202 2865 0.955 0.955 - - - - - RIKEN cDNA B830012L14 gene [Source:MGI Symbol;Acc:MGI:2443332]
28. Cdt1 ENSMUSG00000006585 5994 0.955 0.955 - - - - - chromatin licensing and DNA replication factor 1 [Source:MGI Symbol;Acc:MGI:1914427]
29. Sh2d3c ENSMUSG00000059013 3483 0.955 0.955 - - - - - SH2 domain containing 3C [Source:MGI Symbol;Acc:MGI:1351631]
30. Sptbn2 ENSMUSG00000067889 4571 0.954 0.954 - - - - - spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
31. Zfp384 ENSMUSG00000038346 1875 0.954 0.954 - - - - - zinc finger protein 384 [Source:MGI Symbol;Acc:MGI:2443203]
32. Usp31 ENSMUSG00000063317 2365 0.954 0.954 - - - - - ubiquitin specific peptidase 31 [Source:MGI Symbol;Acc:MGI:1923429]
33. Tcp11l1 ENSMUSG00000027175 1931 0.954 0.954 - - - - - t-complex 11 like 1 [Source:MGI Symbol;Acc:MGI:2444263]
34. Ovca2 ENSMUSG00000038268 1870 0.954 0.954 - - - - - candidate tumor suppressor in ovarian cancer 2 [Source:MGI Symbol;Acc:MGI:2179725]
35. Dct ENSMUSG00000022129 1192 0.953 0.953 - - - - - dopachrome tautomerase [Source:MGI Symbol;Acc:MGI:102563]
36. Rpl15 ENSMUSG00000012405 10694 0.953 0.953 - - - - - ribosomal protein L15 [Source:MGI Symbol;Acc:MGI:1913730]
37. Gm20716 ENSMUSG00000093752 3044 0.947 0.947 - - - - - predicted gene 20716 [Source:MGI Symbol;Acc:MGI:5313163]
38. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 26045 0.945 0.945 - - - - - aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
39. Cox6c ENSMUSG00000014313 15445 0.943 0.943 - - - - - cytochrome c oxidase subunit 6C [Source:MGI Symbol;Acc:MGI:104614]
40. Erp44 ENSMUSG00000028343 4977 0.938 0.938 - - - - - endoplasmic reticulum protein 44 [Source:MGI Symbol;Acc:MGI:1923549]
41. Rpl36al ENSMUSG00000049751 6390 0.928 0.928 - - - - - ribosomal protein L36A-like [Source:MGI Symbol;Acc:MGI:1913733]
42. Uba1 ENSMUSG00000001924 21204 0.927 0.927 - - - - - ubiquitin-like modifier activating enzyme 1 [Source:MGI Symbol;Acc:MGI:98890]
43. Gm14586 ENSMUSG00000083621 39408 0.921 0.921 - - - - - predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
44. Fkbp1a ENSMUSG00000032966 56463 0.92 0.920 - - - - - FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
45. Nt5m ENSMUSG00000032615 855 0.915 - - - - - 0.915 5',3'-nucleotidase, mitochondrial [Source:MGI Symbol;Acc:MGI:1917127]
46. Pon2 ENSMUSG00000032667 1139 0.908 - - - - - 0.908 paraoxonase 2 [Source:MGI Symbol;Acc:MGI:106687]
47. Fryl ENSMUSG00000070733 1717 0.901 - - - - - 0.901 FRY like transcription coactivator [Source:MGI Symbol;Acc:MGI:1919563]
48. Rnf31 ENSMUSG00000047098 530 0.9 - - - - - 0.900 ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
49. Dkk3 ENSMUSG00000030772 426 0.9 - - - - - 0.900 dickkopf WNT signaling pathway inhibitor 3 [Source:MGI Symbol;Acc:MGI:1354952]
50. Vps26a ENSMUSG00000020078 2166 0.899 - - - - - 0.899 VPS26 retromer complex component A [Source:MGI Symbol;Acc:MGI:1353654]
51. Trim23 ENSMUSG00000021712 798 0.899 - - - - - 0.899 tripartite motif-containing 23 [Source:MGI Symbol;Acc:MGI:1933161]
52. Prrg2 ENSMUSG00000007837 453 0.899 - - - - - 0.899 proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 [Source:MGI Symbol;Acc:MGI:1929596]
53. Map2k6 ENSMUSG00000020623 623 0.898 - - - - - 0.898 mitogen-activated protein kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1346870]
54. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.897 - - - - - 0.897 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
55. Atg2a ENSMUSG00000024773, ENSMUSG00000106907 577 0.897 - - - - - 0.897 autophagy related 2A [Source:MGI Symbol;Acc:MGI:1916291]
56. Stk11 ENSMUSG00000003068 745 0.896 - - - - - 0.896 serine/threonine kinase 11 [Source:MGI Symbol;Acc:MGI:1341870]
57. Rragd ENSMUSG00000028278 762 0.896 - - - - - 0.896 Ras-related GTP binding D [Source:MGI Symbol;Acc:MGI:1098604]
58. Megf10 ENSMUSG00000024593 890 0.895 - - - - - 0.895 multiple EGF-like-domains 10 [Source:MGI Symbol;Acc:MGI:2685177]
59. Dpp3 ENSMUSG00000063904 4642 0.894 - - - - - 0.894 dipeptidylpeptidase 3 [Source:MGI Symbol;Acc:MGI:1922471]
60. Usp42 ENSMUSG00000051306 1252 0.894 - - - - - 0.894 ubiquitin specific peptidase 42 [Source:MGI Symbol;Acc:MGI:1924050]
61. Cluh ENSMUSG00000020741 2350 0.893 - - - - - 0.893 clustered mitochondria (cluA/CLU1) homolog [Source:MGI Symbol;Acc:MGI:1921398]
62. Scamp1 ENSMUSG00000021687 1701 0.893 - - - - - 0.893 secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]
63. Trib1 ENSMUSG00000032501 1194 0.893 - - - - - 0.893 tribbles pseudokinase 1 [Source:MGI Symbol;Acc:MGI:2443397]
64. Ptx3 ENSMUSG00000027832 735 0.893 - - - - - 0.893 pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]
65. Zkscan1 ENSMUSG00000029729 2845 0.893 - - - - - 0.893 zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
66. Coq10a ENSMUSG00000039914 324 0.892 - - - - - 0.892 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]
67. Dnajc21 ENSMUSG00000044224 1073 0.892 - - - - - 0.892 DnaJ heat shock protein family (Hsp40) member C21 [Source:MGI Symbol;Acc:MGI:1925371]
68. Myo9b ENSMUSG00000004677 902 0.891 - - - - - 0.891 myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
69. Xk ENSMUSG00000015342 218 0.891 - - - - - 0.891 X-linked Kx blood group [Source:MGI Symbol;Acc:MGI:103569]
70. Zc3hc1 ENSMUSG00000039130 2638 0.891 - - - - - 0.891 zinc finger, C3HC type 1 [Source:MGI Symbol;Acc:MGI:1916023]
71. 4632415L05Rik ENSMUSG00000048106 222 0.89 - - - - - 0.890 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]
72. Ablim1 ENSMUSG00000025085 1169 0.89 - - - - - 0.890 actin-binding LIM protein 1 [Source:MGI Symbol;Acc:MGI:1194500]
73. Atp6v0c ENSMUSG00000024121 107 0.89 - - - - - 0.890 ATPase, H+ transporting, lysosomal V0 subunit C [Source:MGI Symbol;Acc:MGI:88116]
74. Adm ENSMUSG00000030790 312 0.89 - - - - - 0.890 adrenomedullin [Source:MGI Symbol;Acc:MGI:108058]
75. Ccdc68 ENSMUSG00000038903 129 0.89 - - - - - 0.890 coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
76. Golph3 ENSMUSG00000022200 1780 0.89 - - - - - 0.890 golgi phosphoprotein 3 [Source:MGI Symbol;Acc:MGI:1913879]
77. Gm15966 ENSMUSG00000085865 150 0.89 - - - - - 0.890 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
78. Chchd3 ENSMUSG00000053768 3050 0.889 - - - - - 0.889 coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:MGI Symbol;Acc:MGI:1913325]
79. Pnrc2 ENSMUSG00000028675 6182 0.889 - - - - - 0.889 proline-rich nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:106512]
80. Dym ENSMUSG00000035765 507 0.889 - - - - - 0.889 dymeclin [Source:MGI Symbol;Acc:MGI:1918480]
81. Ubap1 ENSMUSG00000028437 2702 0.888 - - - - - 0.888 ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
82. Shmt1 ENSMUSG00000020534 2147 0.888 - - - - - 0.888 serine hydroxymethyltransferase 1 (soluble) [Source:MGI Symbol;Acc:MGI:98299]
83. Mfng ENSMUSG00000018169 425 0.888 - - - - - 0.888 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
84. Snapin ENSMUSG00000001018 1886 0.888 - - - - - 0.888 SNAP-associated protein [Source:MGI Symbol;Acc:MGI:1333745]
85. Tmub1 ENSMUSG00000028958 444 0.888 - - - - - 0.888 transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
86. Ccdc104 Ccdc104 1111 0.887 - - - - - 0.887
87. 2810408I11Rik ENSMUSG00000087213 916 0.887 - - - - - 0.887 RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
88. Arid3b ENSMUSG00000004661 2972 0.887 - - - - - 0.887 AT rich interactive domain 3B (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1930768]
89. Cdc25c ENSMUSG00000044201 1273 0.887 - - - - - 0.887 cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
90. Zfp318 ENSMUSG00000015597 1779 0.887 - - - - - 0.887 zinc finger protein 318 [Source:MGI Symbol;Acc:MGI:1889348]
91. Zfp687 ENSMUSG00000019338 583 0.887 - - - - - 0.887 zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
92. Smad1 ENSMUSG00000031681 1752 0.886 - - - - - 0.886 SMAD family member 1 [Source:MGI Symbol;Acc:MGI:109452]
93. Acyp1 ENSMUSG00000008822 1101 0.886 - - - - - 0.886 acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
94. Rpp14 ENSMUSG00000023156 1874 0.886 - - - - - 0.886 ribonuclease P 14 subunit [Source:MGI Symbol;Acc:MGI:1914303]
95. Adar ENSMUSG00000027951 1612 0.886 - - - - - 0.886 adenosine deaminase, RNA-specific [Source:MGI Symbol;Acc:MGI:1889575]
96. Rbm12b1 ENSMUSG00000046667 331 0.886 - - - - - 0.886 RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
97. Caskin2 ENSMUSG00000034471 316 0.886 - - - - - 0.886 CASK-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2157062]
98. Gnptg ENSMUSG00000035521 519 0.886 - - - - - 0.886 N-acetylglucosamine-1-phosphotransferase, gamma subunit [Source:MGI Symbol;Acc:MGI:2147006]
99. Atxn2l ENSMUSG00000032637 1322 0.886 - - - - - 0.886 ataxin 2-like [Source:MGI Symbol;Acc:MGI:2446242]
100. Bcl2l11 ENSMUSG00000027381 1941 0.885 - - - - - 0.885 BCL2-like 11 (apoptosis facilitator) [Source:MGI Symbol;Acc:MGI:1197519]

There are 369 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA