Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for H3f3a

Gene Name Gene ID Reads Annotation
H3f3a ENSMUSG00000060743 1794 H3 histone, family 3A [Source:MGI Symbol;Acc:MGI:1097686]







Genes with expression patterns similar to H3f3a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. H3f3a ENSMUSG00000060743 1794 6 1.000 1.000 1.000 1.000 1.000 1.000 H3 histone, family 3A [Source:MGI Symbol;Acc:MGI:1097686]
2. Sirpa ENSMUSG00000037902 940 1.552 - 0.843 - - - 0.709 signal-regulatory protein alpha [Source:MGI Symbol;Acc:MGI:108563]
3. Ncoa1 ENSMUSG00000020647 816 0.901 - 0.901 - - - - nuclear receptor coactivator 1 [Source:MGI Symbol;Acc:MGI:1276523]
4. Ift81 ENSMUSG00000029469 806 0.899 - 0.899 - - - - intraflagellar transport 81 [Source:MGI Symbol;Acc:MGI:1098597]
5. Nup37 ENSMUSG00000035351 2174 0.897 - 0.897 - - - - nucleoporin 37 [Source:MGI Symbol;Acc:MGI:1919964]
6. Slc9a8 ENSMUSG00000039463 761 0.894 - 0.894 - - - - solute carrier family 9 (sodium/hydrogen exchanger), member 8 [Source:MGI Symbol;Acc:MGI:1924281]
7. Hus1 ENSMUSG00000020413 906 0.893 - 0.893 - - - - HUS1 checkpoint clamp component [Source:MGI Symbol;Acc:MGI:1277962]
8. Bscl2 ENSMUSG00000071657 1974 0.89 - 0.890 - - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:MGI Symbol;Acc:MGI:1298392]
9. Tex10 ENSMUSG00000028345 705 0.888 - 0.888 - - - - testis expressed gene 10 [Source:MGI Symbol;Acc:MGI:1344413]
10. Camta1 ENSMUSG00000014592 3380 0.888 - 0.888 - - - - calmodulin binding transcription activator 1 [Source:MGI Symbol;Acc:MGI:2140230]
11. Csnk2a2 ENSMUSG00000046707 954 0.888 - 0.888 - - - - casein kinase 2, alpha prime polypeptide [Source:MGI Symbol;Acc:MGI:88547]
12. Zfp36 ENSMUSG00000044786 157 0.887 - 0.887 - - - - zinc finger protein 36 [Source:MGI Symbol;Acc:MGI:99180]
13. Zkscan5 ENSMUSG00000055991 579 0.885 - 0.885 - - - - zinc finger with KRAB and SCAN domains 5 [Source:MGI Symbol;Acc:MGI:107533]
14. Nfatc2ip ENSMUSG00000030722 920 0.885 - 0.885 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
15. Efs ENSMUSG00000022203 645 0.885 - 0.885 - - - - embryonal Fyn-associated substrate [Source:MGI Symbol;Acc:MGI:105311]
16. 9630033F20Rik 9630033F20Rik 937 0.884 - 0.884 - - - -
17. Ppm1d ENSMUSG00000020525 1303 0.884 - 0.884 - - - - protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
18. Shisa5 ENSMUSG00000025647 1562 0.883 - 0.883 - - - - shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
19. Mlx ENSMUSG00000017801 376 0.883 - 0.883 - - - - MAX-like protein X [Source:MGI Symbol;Acc:MGI:108398]
20. Uspl1 ENSMUSG00000041264 1822 0.88 - 0.880 - - - - ubiquitin specific peptidase like 1 [Source:MGI Symbol;Acc:MGI:2442342]
21. Trim39 ENSMUSG00000045409 968 0.879 - 0.879 - - - - tripartite motif-containing 39 [Source:MGI Symbol;Acc:MGI:1890659]
22. Rgl1 ENSMUSG00000026482 938 0.877 - 0.877 - - - - ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
23. Zfp518a ENSMUSG00000049164 1198 0.877 - 0.877 - - - - zinc finger protein 518A [Source:MGI Symbol;Acc:MGI:1919922]
24. Mettl17 ENSMUSG00000004561 924 0.876 - 0.876 - - - - methyltransferase like 17 [Source:MGI Symbol;Acc:MGI:1098577]
25. Naa16 ENSMUSG00000022020 1204 0.876 - 0.876 - - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:MGI Symbol;Acc:MGI:1914147]
26. Coq10b ENSMUSG00000025981 471 0.875 - 0.875 - - - - coenzyme Q10B [Source:MGI Symbol;Acc:MGI:1915126]
27. H2afj ENSMUSG00000060032 2159 0.875 - 0.875 - - - - H2A histone family, member J [Source:MGI Symbol;Acc:MGI:3606192]
28. Rnpc3 ENSMUSG00000027981 855 0.875 - 0.875 - - - - RNA-binding region (RNP1, RRM) containing 3 [Source:MGI Symbol;Acc:MGI:1914475]
29. Osbpl9 ENSMUSG00000028559 1375 0.874 - 0.874 - - - - oxysterol binding protein-like 9 [Source:MGI Symbol;Acc:MGI:1923784]
30. Zfp120 ENSMUSG00000068134 814 0.874 - 0.874 - - - - zinc finger protein 120 [Source:MGI Symbol;Acc:MGI:1345179]
31. Mettl2 ENSMUSG00000020691 572 0.873 - 0.873 - - - - methyltransferase like 2 [Source:MGI Symbol;Acc:MGI:1289171]
32. Kif26b ENSMUSG00000026494 872 0.873 - 0.873 - - - - kinesin family member 26B [Source:MGI Symbol;Acc:MGI:2447076]
33. Ube3c ENSMUSG00000039000 1417 0.873 - 0.873 - - - - ubiquitin protein ligase E3C [Source:MGI Symbol;Acc:MGI:2140998]
34. Anks1 ENSMUSG00000024219 2498 0.873 - 0.873 - - - - ankyrin repeat and SAM domain containing 1 [Source:MGI Symbol;Acc:MGI:2446180]
35. Irs1 ENSMUSG00000055980 207 0.873 - 0.873 - - - - insulin receptor substrate 1 [Source:MGI Symbol;Acc:MGI:99454]
36. Bbs2 ENSMUSG00000031755 976 0.872 - 0.872 - - - - Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
37. Nhp2 ENSMUSG00000001056 4557 0.871 - 0.871 - - - - NHP2 ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1098547]
38. Hpse ENSMUSG00000035273 197 0.871 - 0.871 - - - - heparanase [Source:MGI Symbol;Acc:MGI:1343124]
39. Gm20498 ENSMUSG00000021139 663 0.871 - 0.871 - - - - predicted gene 20498 [Source:MGI Symbol;Acc:MGI:5141963]
40. Acer3 ENSMUSG00000030760 598 0.871 - 0.871 - - - - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
41. Aarsd1 ENSMUSG00000075528 70 0.871 - 0.871 - - - - alanyl-tRNA synthetase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916934]
42. Cdc73 ENSMUSG00000026361 2326 0.87 - 0.870 - - - - cell division cycle 73, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:2384876]
43. Trp53bp1 ENSMUSG00000043909 1824 0.87 - 0.870 - - - - transformation related protein 53 binding protein 1 [Source:MGI Symbol;Acc:MGI:1351320]
44. Pomk ENSMUSG00000037251 373 0.87 - 0.870 - - - - protein-O-mannose kinase [Source:MGI Symbol;Acc:MGI:1921903]
45. Cmah ENSMUSG00000016756 641 0.87 - 0.870 - - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:MGI Symbol;Acc:MGI:103227]
46. Nsmce1 ENSMUSG00000030750 3511 0.869 - 0.869 - - - - NSE1 homolog, SMC5-SMC6 complex component [Source:MGI Symbol;Acc:MGI:1914961]
47. Gskip ENSMUSG00000044715 985 0.869 - 0.869 - - - - GSK3B interacting protein [Source:MGI Symbol;Acc:MGI:1914037]
48. Mtus1 ENSMUSG00000045636 912 0.869 - 0.869 - - - - mitochondrial tumor suppressor 1 [Source:MGI Symbol;Acc:MGI:2142572]
49. Pank2 ENSMUSG00000037514 1182 0.869 - 0.869 - - - - pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
50. Malt1 ENSMUSG00000032688 329 0.868 - 0.868 - - - - MALT1 paracaspase [Source:MGI Symbol;Acc:MGI:2445027]
51. Ddx50 ENSMUSG00000020076 3606 0.868 - 0.868 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 [Source:MGI Symbol;Acc:MGI:2182303]
52. Pcna-ps2 ENSMUSG00000067608 627 0.867 - 0.867 - - - - proliferating cell nuclear antigen pseudogene 2 [Source:MGI Symbol;Acc:MGI:97505]
53. Kcnk1 ENSMUSG00000033998 256 0.867 - 0.867 - - - - potassium channel, subfamily K, member 1 [Source:MGI Symbol;Acc:MGI:109322]
54. Zfc3h1 ENSMUSG00000034163 1104 0.867 - 0.867 - - - - zinc finger, C3H1-type containing [Source:MGI Symbol;Acc:MGI:2446143]
55. Sgsm2 ENSMUSG00000038351 512 0.867 - 0.867 - - - - small G protein signaling modulator 2 [Source:MGI Symbol;Acc:MGI:2144695]
56. Timm23 ENSMUSG00000013701 439 0.866 - 0.866 - - - - translocase of inner mitochondrial membrane 23 [Source:MGI Symbol;Acc:MGI:1858317]
57. Atp6v0a2 ENSMUSG00000038023 268 0.866 - 0.866 - - - - ATPase, H+ transporting, lysosomal V0 subunit A2 [Source:MGI Symbol;Acc:MGI:104855]
58. 2310014L17Rik 2310014L17Rik 153 0.866 - 0.866 - - - -
59. St3gal4 ENSMUSG00000032038 227 0.866 - 0.866 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:MGI Symbol;Acc:MGI:1316743]
60. Stambpl1 ENSMUSG00000024776 130 0.866 - 0.866 - - - - STAM binding protein like 1 [Source:MGI Symbol;Acc:MGI:1923880]
61. Spon2 ENSMUSG00000037379 204 0.866 - 0.866 - - - - spondin 2, extracellular matrix protein [Source:MGI Symbol;Acc:MGI:1923724]
62. Zbtb41 ENSMUSG00000033964 787 0.865 - 0.865 - - - - zinc finger and BTB domain containing 41 [Source:MGI Symbol;Acc:MGI:2444487]
63. Cacfd1 ENSMUSG00000015488 2060 0.865 - 0.865 - - - - calcium channel flower domain containing 1 [Source:MGI Symbol;Acc:MGI:1924317]
64. Pdp2 ENSMUSG00000048371 637 0.865 - 0.865 - - - - pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
65. Acy1 ENSMUSG00000023262 490 0.864 - 0.864 - - - - aminoacylase 1 [Source:MGI Symbol;Acc:MGI:87913]
66. Lox ENSMUSG00000024529 219 0.864 - 0.864 - - - - lysyl oxidase [Source:MGI Symbol;Acc:MGI:96817]
67. 4933426M11Rik 4933426M11Rik 441 0.864 - 0.864 - - - -
68. Gm12840 ENSMUSG00000086320 98 0.864 - 0.864 - - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
69. AA465934 ENSMUSG00000093483 144 0.864 - 0.864 - - - - expressed sequence AA465934 [Source:MGI Symbol;Acc:MGI:2671018]
70. Fam151b ENSMUSG00000034334 2211 0.864 - 0.864 - - - - family with sequence similarity 151, member B [Source:MGI Symbol;Acc:MGI:1921192]
71. Bola3 ENSMUSG00000045160 1800 0.863 - 0.863 - - - - bolA-like 3 (E. coli) [Source:MGI Symbol;Acc:MGI:1925903]
72. Tpr ENSMUSG00000006005 4170 0.863 - 0.863 - - - - translocated promoter region, nuclear basket protein [Source:MGI Symbol;Acc:MGI:1922066]
73. Lphn2 Lphn2 6084 0.863 - 0.863 - - - -
74. Slc25a32 ENSMUSG00000022299, ENSMUSG00000107007 146 0.862 - 0.862 - - - - solute carrier family 25, member 32 [Source:MGI Symbol;Acc:MGI:1917156]
75. 3110099E03Rik ENSMUSG00000085582 57 0.862 - 0.862 - - - - RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
76. Xpc ENSMUSG00000030094 530 0.862 - 0.862 - - - - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
77. Aspa ENSMUSG00000020774 50 0.862 - 0.862 - - - - aspartoacylase [Source:MGI Symbol;Acc:MGI:87914]
78. Gm4258 ENSMUSG00000098243 99 0.862 - 0.862 - - - - predicted gene 4258 [Source:MGI Symbol;Acc:MGI:3782435]
79. Rhod ENSMUSG00000041845 571 0.861 - 0.861 - - - - ras homolog family member D [Source:MGI Symbol;Acc:MGI:108446]
80. Pdcd2 ENSMUSG00000014771 871 0.861 - 0.861 - - - - programmed cell death 2 [Source:MGI Symbol;Acc:MGI:104643]
81. Gramd1a ENSMUSG00000001248 2162 0.861 - 0.861 - - - - GRAM domain containing 1A [Source:MGI Symbol;Acc:MGI:105490]
82. Gm3695 ENSMUSG00000067224 120 0.86 - 0.860 - - - - predicted gene 3695 [Source:MGI Symbol;Acc:MGI:3781871]
83. Gm14843 ENSMUSG00000083897 219 0.86 - 0.860 - - - - predicted gene 14843 [Source:MGI Symbol;Acc:MGI:3802062]
84. Nid2 ENSMUSG00000021806 452 0.86 - 0.860 - - - - nidogen 2 [Source:MGI Symbol;Acc:MGI:1298229]
85. Zfp819 ENSMUSG00000055102 59 0.86 - 0.860 - - - - zinc finger protein 819 [Source:MGI Symbol;Acc:MGI:1921650]
86. Pax5 ENSMUSG00000014030 74 0.86 - 0.860 - - - - paired box 5 [Source:MGI Symbol;Acc:MGI:97489]
87. Tbc1d9 ENSMUSG00000031709 688 0.859 - 0.859 - - - - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
88. 4933404O12Rik ENSMUSG00000097908 302 0.859 - 0.859 - - - - RIKEN cDNA 4933404O12 gene [Source:MGI Symbol;Acc:MGI:1914002]
89. Rnf19a ENSMUSG00000022280 802 0.859 - 0.859 - - - - ring finger protein 19A [Source:MGI Symbol;Acc:MGI:1353623]
90. Tmem203 ENSMUSG00000078201 356 0.859 - 0.859 - - - - transmembrane protein 203 [Source:MGI Symbol;Acc:MGI:2443597]
91. Zfp639 ENSMUSG00000027667 1604 0.859 - 0.859 - - - - zinc finger protein 639 [Source:MGI Symbol;Acc:MGI:1915028]
92. Hps4 ENSMUSG00000042328 481 0.858 - 0.858 - - - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:MGI Symbol;Acc:MGI:2177742]
93. Zfp428 ENSMUSG00000064264 966 0.858 - 0.858 - - - - zinc finger protein 428 [Source:MGI Symbol;Acc:MGI:1916463]
94. Efemp2 ENSMUSG00000024909 777 0.858 - 0.858 - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]
95. Atrip ENSMUSG00000025646 321 0.857 - 0.857 - - - - ATR interacting protein [Source:MGI Symbol;Acc:MGI:1925349]
96. Avl9 ENSMUSG00000029787 1346 0.857 - 0.857 - - - - AVL9 cell migration associated [Source:MGI Symbol;Acc:MGI:1926187]
97. Tpmt ENSMUSG00000021376 544 0.857 - 0.857 - - - - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
98. 6330416G13Rik 684 0.856 - 0.856 - - - - RIKEN cDNA 6330416G13 gene, transcript variant X5
99. Usb1 ENSMUSG00000031792 470 0.856 - 0.856 - - - - U6 snRNA biogenesis 1 [Source:MGI Symbol;Acc:MGI:2142454]
100. Zfp354c ENSMUSG00000044807 1644 0.855 - 0.855 - - - - zinc finger protein 354C [Source:MGI Symbol;Acc:MGI:1353621]

There are 411 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA