Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GTF3C1

Gene Name Gene ID Reads Annotation
GTF3C1 ENSGALG00000007387 5788 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]











Genes with expression patterns similar to GTF3C1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GTF3C1 ENSGALG00000007387 5788 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
2. ENSGALG00000014171 ENSGALG00000014171 10383 2.31 - - - - - - 0.713 - 0.772 0.825
3. PCLO 249 1.807 - - - - - - - - 0.859 0.948 piccolo presynaptic cytomatrix protein
4. MTSS1 ENSGALG00000041969 1312 1.782 - - - - - - - - 0.822 0.960 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
5. FSTL4 ENSGALG00000031487 529 1.777 - - - - - - - - 0.831 0.946 follistatin like 4 [Source:NCBI gene;Acc:395163]
6. FASTKD3 ENSGALG00000033521 1186 1.766 - - - - - - - - 0.817 0.949 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
7. CCDC88A ENSGALG00000043587 2208 1.748 - - - - 0.809 - - - - 0.939 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
8. SNRNP48 ENSGALG00000013005 1468 1.742 - - - - - - - - 0.826 0.916 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
9. PCNP ENSGALG00000015330 15750 1.739 - - - - 0.828 - - - - 0.911 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
10. CRYM ENSGALG00000002484 3558 1.735 - - - - - - - - 0.796 0.939 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
11. WDSUB1 ENSGALG00000012574 2038 1.696 - - - - - - - - 0.749 0.947 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
12. C26H6ORF89 C26H6ORF89 1826 1.692 - - - - 0.761 - - - - 0.931
13. PTX3 ENSGALG00000028284 2984 1.674 - - - - 0.723 - - - - 0.951 pentraxin 3 [Source:NCBI gene;Acc:548626]
14. DUS2 856 1.673 - - - - 0.788 - - - 0.885 - dihydrouridine synthase 2, transcript variant X2
15. LRRN4 ENSGALG00000008815 481 1.672 - - - - - - - - 0.734 0.938 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
16. ALMS1 ENSGALG00000044620 570 1.671 - - - - - - - - 0.858 0.813 ALMS1, centrosome and basal body associated protein, transcript variant X1
17. ATP6V0A1 ENSGALG00000003256 4408 1.668 - - - - - - - - 0.821 0.847 ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
18. BRD1 ENSGALG00000029379 6047 1.666 - - - - - - - 0.711 - 0.955 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
19. SLC39A13 ENSGALG00000008122 2003 1.661 - - - - - - - - 0.709 0.952 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
20. MPRIP ENSGALG00000004798 6700 1.653 - - - - - - - 0.729 - 0.924 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
21. VWF ENSGALG00000017272 1012 1.649 - - - - - - - - 0.836 0.813 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
22. RBBP8 ENSGALG00000014982 3255 1.648 - - - - - - - - 0.848 0.800 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
23. FANCB ENSGALG00000016569 1193 1.645 - - - - - - - - 0.859 0.786 FA complementation group B [Source:NCBI gene;Acc:418628]
24. WRNIP1 ENSGALG00000012856 1954 1.644 - - - - 0.739 - - - - 0.905 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
25. MB21D1 2460 1.641 - - - - - - 0.700 - - 0.941 Mab-21 domain containing 1
26. RIN2 ENSGALG00000008457 2661 1.641 - - - - - - - - 0.772 0.869 Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
27. SPTSSA ENSGALG00000025755 3361 1.636 - - - - - - - 0.711 - 0.925 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
28. MIER1 ENSGALG00000011118 1418 1.636 - - - - - - - 0.716 - 0.920 MIER1 transcriptional regulator [Source:NCBI gene;Acc:424702]
29. RRAGC ENSGALG00000033079 4966 1.634 - - - - 0.706 - - - - 0.928 Ras related GTP binding C [Source:NCBI gene;Acc:419605]
30. SNAI1 ENSGALG00000008018 3930 1.626 - - - - - - - - 0.809 0.817 snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
31. STIL ENSGALG00000010478 1398 1.615 - - - - 0.714 - - - - 0.901 STIL, centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]
32. CLIC4 ENSGALG00000001262 11497 1.605 - - - - - - 0.707 - - 0.898 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
33. ZC3H11A ENSGALG00000000541 2712 1.593 - - - - - - - - 0.750 0.843 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
34. CCND1 ENSGALG00000007555 6715 1.593 - - - - - - - 0.712 - 0.881 cyclin D1 [Source:NCBI gene;Acc:396341]
35. BZW2 ENSGALG00000010809 29213 1.59 - - - - - - - 0.702 - 0.888 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
36. SMDT1 ENSGALG00000011897 9360 1.577 - - - - - - - - 0.796 0.781 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
37. CHRAC1 ENSGALG00000040823 5695 1.561 - - - - - - - 0.723 - 0.838 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
38. NCOR1 ENSGALG00000004477 4534 1.553 - - - - - - - 0.759 - 0.794 nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:HGNC:7672]
39. APMAP ENSGALG00000008651 2167 1.536 - - - - 0.783 - - - 0.753 - adipocyte plasma membrane associated protein [Source:NCBI gene;Acc:416715]
40. MRPS30 ENSGALG00000014874 3416 1.529 - - - - - - - - 0.821 0.708 mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
41. PCMT1 ENSGALG00000012388 7778 1.526 - - - - - - - - 0.786 0.740 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
42. TPM4 ENSGALG00000002563 15621 1.51 - - - - - - - - 0.725 0.785 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
43. KPNA6 ENSGALG00000003383 6937 1.478 - - - - - - 0.751 - 0.727 - karyopherin subunit alpha 6 [Source:NCBI gene;Acc:419656]
44. NOC4L ENSGALG00000002272 9644 1.473 - - - - - - 0.720 - - 0.753 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
45. SAFB2 ENSGALG00000001948 10238 1.469 - - - - 0.739 - 0.730 - - - scaffold attachment factor B2, transcript variant X6
46. LONP2 ENSGALG00000003942 3380 1.452 - - - - - - - 0.712 0.740 - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
47. RPA3 ENSGALG00000010700 6212 1.449 - - - - 0.734 - - - - 0.715 replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
48. RALGAPB ENSGALG00000001420 5112 1.442 - - - - 0.717 - - - - 0.725 Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
49. CCNC ENSGALG00000015471 6497 1.425 - - - - 0.701 - - - 0.724 - cyclin C [Source:NCBI gene;Acc:421791]
50. KLHL13 KLHL13 2712 1.417 - - - - - - 0.710 - 0.707 -
51. VIMP VIMP 4379 1.413 - - - - 0.700 - - - - 0.713
52. SLC2A3 SLC2A3 527 0.968 - - - - - - - - - 0.968
53. DIAPH3 ENSGALG00000016937 1069 0.961 - - - - - - - - - 0.961 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
54. AGGF1 ENSGALG00000004311 3011 0.96 - - - - - - - - - 0.960 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
55. SOX6 ENSGALG00000006074 102 0.958 - - - - - - - - - 0.958 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
56. CASKIN1 604 0.957 - - - - - - - - - 0.957 CASK interacting protein 1, transcript variant X4
57. CNTRL ENSGALG00000001513 1773 0.956 - - - - - - - - - 0.956 centriolin [Source:NCBI gene;Acc:417121]
58. PDPN ENSGALG00000030096 647 0.956 - - - - - - - - - 0.956 podoplanin, transcript variant X4
59. AURKA ENSGALG00000007768 793 0.956 - - - - - - - - - 0.956 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
60. BDP1 BDP1 3073 0.953 - - - - - - - - - 0.953
61. PROM1 ENSGALG00000014496 2494 0.953 - - - - - - - - - 0.953 prominin 1 [Source:NCBI gene;Acc:422825]
62. MSI1 ENSGALG00000007227 2279 0.953 - - - - - - - - - 0.953 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
63. CDH1-A CDH1-A 343 0.953 - - - - - - - - - 0.953
64. ZNF6 ZNF6 138 0.952 - - - - - - - - - 0.952
65. FBXO21 ENSGALG00000008201 2608 0.952 - - - - - - - - - 0.952 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
66. ITSN2 ENSGALG00000016504 651 0.952 - - - - - - - - - 0.952 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
67. APBA3 ENSGALG00000000740 1249 0.952 - - - - - - - - - 0.952 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
68. CXADR ENSGALG00000015701 96 0.952 - - - - - - - - - 0.952 coxsackie virus and adenovirus receptor, transcript variant X2
69. ARHGAP21 ENSGALG00000007721 3961 0.951 - - - - - - - - - 0.951 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
70. FAM190B FAM190B 165 0.951 - - - - - - - - - 0.951
71. IL10R2 IL10R2 72 0.951 - - - - - - - - - 0.951
72. 5S_2 5S_2 58 0.951 - - - - - - - - - 0.951
73. CPNE2 ENSGALG00000001316 236 0.95 - - - - - - - - - 0.950 copine 2 [Source:NCBI gene;Acc:415646]
74. SGSH ENSGALG00000007027 1115 0.95 - - - - - - - - - 0.950 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
75. CPT2 ENSGALG00000010681 3211 0.95 - - - - - - - - - 0.950 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
76. TMEM128 ENSGALG00000014992 6567 0.95 - - - - - - - - - 0.950 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
77. CCDC51 ENSGALG00000006465 1845 0.949 - - - - - - - - - 0.949 coiled-coil domain containing 51, transcript variant X1
78. INTS10 ENSGALG00000010130 6320 0.948 - - - - - - - - - 0.948 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
79. ITGA9 ENSGALG00000029378 415 0.947 - - - - - - - - - 0.947 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
80. NARS ENSGALG00000040506 9506 0.947 - - - - - - - - - 0.947 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
81. TP53BP1 ENSGALG00000042201 708 0.947 - - - - - - - - - 0.947 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
82. HYAL3 ENSGALG00000029000 712 0.947 - - - - - - - - - 0.947 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
83. TBC1D19 ENSGALG00000029673 1868 0.947 - - - - - - - - - 0.947 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
84. ESRRG ENSGALG00000009645 2783 0.946 - - - - - - - - - 0.946 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
85. SSH1 ENSGALG00000004928 222 0.946 - - - - - - - - - 0.946 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
86. WHSC1 1712 0.946 - - - - - - - - - 0.946 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
87. C14orf80 C14orf80 1921 0.946 - - - - - - - - - 0.946
88. ENSGALG00000005389 ENSGALG00000005389 553 0.944 - - - - - - - - - 0.944
89. MYH1D ENSGALG00000027323 365 0.943 - - - - - - - - - 0.943 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
90. GRK4 ENSGALG00000015645 1065 0.943 - - - - - - - - - 0.943 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
91. ZFR ENSGALG00000003235 8466 0.942 - - - - - - - - - 0.942 zinc finger RNA binding protein, transcript variant X3
92. MYOCD ENSGALG00000001021 351 0.942 - - - - - - - - - 0.942 myocardin [Source:NCBI gene;Acc:427790]
93. LAMP2 ENSGALG00000008572 198 0.942 - - - - - - - - - 0.942 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
94. PM20D2 ENSGALG00000015779 1301 0.942 - - - - - - - - - 0.942 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
95. ASB3 ENSGALG00000008176 5422 0.942 - - - - - - - - - 0.942 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
96. HOTAIRM1 HOTAIRM1 4335 0.942 - - - - - - - - - 0.942
97. PPFIA1 ENSGALG00000035774 5258 0.941 - - - - - - - - - 0.941 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
98. FAM129A ENSGALG00000004812 269 0.941 - - - - - - - - - 0.941 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
99. ANKRD17 ENSGALG00000011642 3192 0.941 - - - - - - - - - 0.941 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
100. RNF219 ENSGALG00000016911 4458 0.941 - - - - - - - - - 0.941 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]

There are 858 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA