Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GTF3A

Gene Name Gene ID Reads Annotation
GTF3A ENSGALG00000017098 9264 general transcription factor IIIA [Source:NCBI gene;Acc:418931]











Genes with expression patterns similar to GTF3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GTF3A ENSGALG00000017098 9264 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 general transcription factor IIIA [Source:NCBI gene;Acc:418931]
2. USB1 ENSGALG00000035604 4003 2.281 - - - 0.786 - - 0.771 0.724 - - U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]
3. SS18 ENSGALG00000015119 4687 1.695 - - - - - - - 0.966 0.729 - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
4. MOSPD1 ENSGALG00000006132 8503 1.526 - - - 0.747 - - 0.779 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
5. CYB5R3 ENSGALG00000014122 7664 1.512 - - - 0.729 - - 0.783 - - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
6. CHCHD3 ENSGALG00000006489 18592 1.481 - - - 0.721 - - 0.760 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
7. CANX ENSGALG00000032148 11297 1.476 - - - 0.734 - - 0.742 - - - calnexin [Source:NCBI gene;Acc:416288]
8. DBNDD2 ENSGALG00000003921 8301 1.45 - - - 0.716 - - 0.734 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
9. NUMA1 ENSGALG00000001258 8406 0.994 - - - - - - - 0.994 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
10. ZDHHC14 ENSGALG00000013695 2648 0.992 - - - - - - - 0.992 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
11. ISY1 ENSGALG00000005012 7477 0.991 - - - - - - - 0.991 - - ISY1 splicing factor homolog
12. COMT ENSGALG00000002024 2483 0.99 - - - - - - - 0.990 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
13. ASAH1 ENSGALG00000026364 2783 0.986 - - - - - - - 0.986 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
14. PI4K2B ENSGALG00000031538 2607 0.985 - - - - - - - 0.985 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
15. DCAF4 ENSGALG00000009345 2604 0.985 - - - - - - - 0.985 - - DDB1 and CUL4 associated factor 4
16. COMMD8 ENSGALG00000026279 13509 0.985 - - - - - - - 0.985 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
17. MAN2C1 ENSGALG00000001615 2362 0.985 - - - - - - - 0.985 - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
18. EXOC8 ENSGALG00000043280 3596 0.984 - - - - - - - 0.984 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
19. ADAT1 ENSGALG00000000908 1484 0.984 - - - - - - - 0.984 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
20. DDX54 ENSGALG00000007490 8729 0.984 - - - - - - - 0.984 - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
21. ERP44 ENSGALG00000013452 5352 0.984 - - - - - - - 0.984 - - endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
22. CREG1 ENSGALG00000040426 1188 0.984 - - - - - - - 0.984 - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
23. FOCAD ENSGALG00000015071 3677 0.984 - - - - - - - 0.984 - - focadhesin [Source:NCBI gene;Acc:427233]
24. MRPL22 ENSGALG00000003919 2760 0.983 - - - - - - - 0.983 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
25. PSMC3IP ENSGALG00000019741 5428 0.983 - - - - - - - 0.983 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
26. KIF18B ENSGALG00000031553 3192 0.983 - - - - - - - 0.983 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
27. DACT1 ENSGALG00000012023 1008 0.983 - - - - - - - 0.983 - - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
28. RFWD2 1215 0.983 - - - - - - - 0.983 - - ring finger and WD repeat domain 2, transcript variant X6
29. IQCK ENSGALG00000028197 596 0.983 - - - - - - - 0.983 - - IQ motif containing K [Source:HGNC Symbol;Acc:HGNC:28556]
30. KIF21A ENSGALG00000007098 5919 0.983 - - - - - - - 0.983 - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
31. NHLRC1 ENSGALG00000012688 1476 0.983 - - - - - - - 0.983 - - NHL repeat containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21576]
32. HGS ENSGALG00000007224 3487 0.982 - - - - - - - 0.982 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
33. TP73 ENSGALG00000001006 335 0.982 - - - - - - - 0.982 - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
34. PALB2 ENSGALG00000006078 1549 0.982 - - - - - - - 0.982 - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
35. COMMD10 ENSGALG00000002308 7442 0.979 - - - - - - - 0.979 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
36. NDUFA9 ENSGALG00000017282 14358 0.979 - - - - - - - 0.979 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
37. C14orf1 C14orf1 14289 0.978 - - - - - - - 0.978 - -
38. DRG1 ENSGALG00000006921 10791 0.978 - - - - - - - 0.978 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
39. AIF1L ENSGALG00000029834 13866 0.977 - - - - - - - 0.977 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
40. KRR1 ENSGALG00000010227 11783 0.974 - - - - - - - 0.974 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
41. PIGQ ENSGALG00000001985 1584 0.973 - - - - - - - 0.973 - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
42. RERE ENSGALG00000002232 8724 0.968 - - - - - - - 0.968 - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
43. LIX1 ENSGALG00000015290 7589 0.965 - - - - - - - 0.965 - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
44. ERP29 ENSGALG00000023510 47100 0.949 - - - - - - - 0.949 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
45. SGSM3 ENSGALG00000012033 1839 0.946 - - - - - - - 0.946 - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
46. RIOK3 ENSGALG00000015004 4249 0.935 - - - - - - - 0.935 - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
47. GREB1 ENSGALG00000016455 12794 0.925 - - - - - - - 0.925 - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
48. RABIF ENSGALG00000000436 6449 0.922 - - - - - - - 0.922 - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
49. HOXA4 ENSGALG00000022622 22327 0.921 - - - - - - - 0.921 - - homeobox A4 [Source:NCBI gene;Acc:395307]
50. BCAR1 ENSGALG00000042895 8222 0.921 - - - - - - - 0.921 - - BCAR1, Cas family scaffold protein [Source:HGNC Symbol;Acc:HGNC:971]
51. ATG3 ENSGALG00000015204 11277 0.921 - - - - - - - 0.921 - - autophagy related 3 [Source:NCBI gene;Acc:418369]
52. EI24 ENSGALG00000038097 24081 0.921 - - - - - - - 0.921 - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
53. TUBB6 ENSGALG00000031275 17690 0.914 - - - - - - - 0.914 - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
54. ATP6V1C1 ENSGALG00000034099 9898 0.895 - - - - - - - 0.895 - - ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]
55. PRELP ENSGALG00000034456 4354 0.892 - - - - - - - 0.892 - - proline and arginine rich end leucine rich repeat protein [Source:HGNC Symbol;Acc:HGNC:9357]
56. LSM5 ENSGALG00000041625 22307 0.889 - - - - - - - 0.889 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
57. BTBD1 ENSGALG00000006020 14157 0.889 - - - - - - - 0.889 - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
58. EHD3 ENSGALG00000009086 14407 0.889 - - - - - - - 0.889 - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
59. FYTTD1 ENSGALG00000007581 9341 0.887 - - - - - - - 0.887 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
60. HRAS1 HRAS1 7988 0.874 - - - - - - - 0.874 - -
61. ZRANB2 ENSGALG00000011340 18994 0.873 - - - - - - - 0.873 - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
62. EIF3M ENSGALG00000012109 38661 0.867 - - - - - - - 0.867 - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
63. SLC30A4 ENSGALG00000005703 5696 0.867 - - - - - - 0.867 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
64. HBE 329974 0.865 - - - - - - - 0.865 - - hemoglobin subunit epsilon
65. PMPCA ENSGALG00000001950 6766 0.861 - - - - - - - 0.861 - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
66. IP6K2 ENSGALG00000005701 12539 0.86 - - - - - - - 0.860 - - inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
67. YTHDF2 ENSGALG00000034831 15118 0.859 - - - - - - - 0.859 - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
68. CUL3 ENSGALG00000005108 9571 0.85 - - - - - - - 0.850 - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
69. VPS29 ENSGALG00000004529 22509 0.848 - - - - - - 0.848 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
70. NDUFAF1 ENSGALG00000008587 14779 0.844 - - - - - - 0.844 - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
71. NEDD4L ENSGALG00000034584 5881 0.843 - - - - - - - 0.843 - - neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, transcript variant X6
72. WASF1 ENSGALG00000015066 5628 0.841 - - - - - - - 0.841 - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
73. DDX46 ENSGALG00000006404 8765 0.84 - - - - - - - 0.840 - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
74. DHCR7 ENSGALG00000004106 4731 0.839 - - - - - - - 0.839 - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
75. RIT1 ENSGALG00000014647 7174 0.839 - - - - - - 0.839 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
76. FASTKD2 ENSGALG00000008529 7439 0.838 - - - - - - - 0.838 - - FAST kinase domains 2 [Source:HGNC Symbol;Acc:HGNC:29160]
77. GPN2 ENSGALG00000027909 5204 0.836 - - - - - - - 0.836 - - GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]
78. BMI1 ENSGALG00000041267 6618 0.836 - - - - - - - 0.836 - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
79. METAP2 ENSGALG00000011377 16311 0.832 - - - - - - - 0.832 - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
80. INTS6 ENSGALG00000017018 3083 0.826 - - - - - - 0.826 - - - integrator complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14879]
81. DTYMK ENSGALG00000006305 11736 0.826 - - - - - - 0.826 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
82. HSPD1 ENSGALG00000008094 40870 0.825 - - - - - - - 0.825 - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
83. CCNK ENSGALG00000011138 6416 0.824 - - - - - - 0.824 - - - cyclin K [Source:NCBI gene;Acc:423446]
84. MORF4L1 ENSGALG00000008146 29940 0.823 - - - - - - - 0.823 - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
85. RNF10 ENSGALG00000036417 8027 0.82 - - - - - - 0.820 - - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
86. EEF1E1 ENSGALG00000012781 22615 0.817 - - - - - - - 0.817 - - eukaryotic translation elongation factor 1 epsilon 1
87. NIPA2 ENSGALG00000016737 3792 0.811 - - - - - - 0.811 - - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
88. ENSGALG00000007574 ENSGALG00000007574 7695 0.811 - - - - - - 0.811 - - -
89. KIAA1524 ENSGALG00000015360 3527 0.808 - - - - - - 0.808 - - - KIAA1524 [Source:NCBI gene;Acc:418410]
90. URM1 ENSGALG00000004971 17880 0.807 - - - - - - 0.807 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
91. CAMSAP2 ENSGALG00000002145 6109 0.807 - - - - - - 0.807 - - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
92. SNRPC ENSGALG00000002773 21965 0.806 - - - - - - 0.806 - - - small nuclear ribonucleoprotein polypeptide C [Source:NCBI gene;Acc:419901]
93. PRPF40A ENSGALG00000012526 7724 0.804 - - - - - - 0.804 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
94. DPYSL3 ENSGALG00000007582 7743 0.803 - - - - - - 0.803 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
95. PPP2R5A ENSGALG00000009828 10309 0.801 - - - - - - 0.801 - - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
96. GTPBP10 ENSGALG00000009035 1397 0.801 - - - - - - - - 0.801 - GTP binding protein 10 [Source:HGNC Symbol;Acc:HGNC:25106]
97. VAMP7 ENSGALG00000007476 4173 0.8 - - - - - - - 0.800 - - vesicle associated membrane protein 7 [Source:NCBI gene;Acc:422297]
98. ATP1A1 ENSGALG00000032247 15898 0.799 - - - - - - 0.799 - - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
99. HSD17B12 ENSGALG00000036787 11748 0.799 - - - - - - - - 0.799 - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
100. GLRX5 ENSGALG00000011079 28943 0.798 - - - - - - 0.798 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]

There are 276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA