Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GTF2IRD1

Gene Name Gene ID Reads Annotation
GTF2IRD1 ENSGALG00000001263 14716 GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]











Genes with expression patterns similar to GTF2IRD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GTF2IRD1 ENSGALG00000001263 14716 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
2. EMILIN2 ENSGALG00000032997 2460 1.614 - - 0.875 - - - 0.739 - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
3. SMC4 ENSGALG00000009553 15715 1.577 - - 0.791 - - - 0.786 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
4. CTBP1 ENSGALG00000039942 9383 1.553 - - 0.819 - - - 0.734 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
5. VMA21 ENSGALG00000009065 6432 1.548 - - 0.812 - - - 0.736 - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
6. FUNDC2 ENSGALG00000029585 9334 1.53 - - - - - - 0.777 0.753 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
7. BMS1 ENSGALG00000002624 8339 1.507 - - 0.795 - - - 0.712 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
8. YAF2 ENSGALG00000009540 8452 1.493 - - 0.757 - - - - 0.736 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
9. CBLL1 ENSGALG00000038981 6725 1.487 - - 0.773 - - - 0.714 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
10. FNBP1L ENSGALG00000005850 9219 1.474 - - 0.765 - - - 0.709 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
11. SLC25A20 ENSGALG00000028227 7685 1.471 - - 0.758 - - - 0.713 - - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
12. NVL ENSGALG00000009322 5286 1.466 - - - - - - 0.717 0.749 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
13. XRCC5 ENSGALG00000011492 6802 1.408 - - - - - - 0.708 0.700 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
14. FAM171B ENSGALG00000002646 837 0.955 - - 0.955 - - - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
15. FAT1 ENSGALG00000013579 6030 0.935 - - 0.935 - - - - - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
16. RAD51AP1 ENSGALG00000017290 3807 0.928 - - 0.928 - - - - - - - RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]
17. ANXA8 ENSGALG00000005956 479 0.924 - - 0.924 - - - - - - - annexin A8, transcript variant X1
18. YWHAQ ENSGALG00000016433 3450 0.921 - - 0.921 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
19. CYP27A1 ENSGALG00000002470 321 0.921 - - 0.921 - - - - - - - cytochrome P450 family 27 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2605]
20. SOAT1 ENSGALG00000004205 2394 0.91 - - 0.910 - - - - - - - sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]
21. ZC3H18 2569 0.906 - - 0.906 - - - - - - - zinc finger CCCH-type containing 18, transcript variant X3
22. FAM188B 2097 0.898 - - 0.898 - - - - - - - family with sequence similarity 188 member B
23. CRCP ENSGALG00000002587 8809 0.898 - - 0.898 - - - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
24. GTF2A1 ENSGALG00000010576 4570 0.898 - - 0.898 - - - - - - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
25. RAB10 ENSGALG00000016535 5272 0.892 - - 0.892 - - - - - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
26. SLC9A3R2 ENSGALG00000005608 4220 0.892 - - 0.892 - - - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
27. PPA2 ENSGALG00000010582 22301 0.885 - - - - - - - 0.885 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
28. MAN2B2 ENSGALG00000015537 2267 0.88 - - 0.880 - - - - - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
29. GBE1 ENSGALG00000042771 2323 0.88 - - 0.880 - - - - - - - 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
30. THOC2 ENSGALG00000008507 9501 0.878 - - 0.878 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
31. YBX1 ENSGALG00000004848 20992 0.877 - - 0.877 - - - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
32. ZCCHC10 ENSGALG00000036666 5148 0.876 - - 0.876 - - - - - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
33. MYO5A ENSGALG00000031987 2469 0.875 - - 0.875 - - - - - - - myosin VA [Source:NCBI gene;Acc:396237]
34. PPT1 ENSGALG00000003936 2540 0.874 - - 0.874 - - - - - - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
35. SDAD1 ENSGALG00000011543 5191 0.873 - - 0.873 - - - - - - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
36. CREB3L2 ENSGALG00000012877 2515 0.868 - - 0.868 - - - - - - - cAMP responsive element binding protein 3 like 2 [Source:HGNC Symbol;Acc:HGNC:23720]
37. RAB34 ENSGALG00000026315 1193 0.867 - - 0.867 - - - - - - - RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
38. UTRN ENSGALG00000012256 9980 0.862 - - 0.862 - - - - - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
39. SLC25A4 ENSGALG00000010614 9970 0.857 - - 0.857 - - - - - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
40. MRPS34 ENSGALG00000001792 14262 0.854 - - 0.854 - - - - - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
41. NDUFB3 ENSGALG00000008239 15511 0.853 - - - - - - 0.853 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
42. MAP4K3 ENSGALG00000039720 5124 0.85 - - 0.850 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
43. MAP1B ENSGALG00000014999 6288 0.848 - - 0.848 - - - - - - - microtubule associated protein 1B
44. CTSA ENSGALG00000006876 5380 0.846 - - 0.846 - - - - - - - cathepsin A [Source:NCBI gene;Acc:428163]
45. NXT2 ENSGALG00000008092 2477 0.844 - - 0.844 - - - - - - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
46. ST5 6869 0.844 - - 0.844 - - - - - - - suppression of tumorigenicity 5, transcript variant X1
47. SEC63 ENSGALG00000015308 11596 0.843 - - - - - - 0.843 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
48. ENSGALG00000028164 ENSGALG00000028164 3325 0.843 - - 0.843 - - - - - - -
49. TMEM41B ENSGALG00000005815 2049 0.84 - - 0.840 - - - - - - - transmembrane protein 41B [Source:NCBI gene;Acc:423047]
50. CHMP3 ENSGALG00000015805 11581 0.839 - - - - - - 0.839 - - - charged multivesicular body protein 3
51. NSA2 ENSGALG00000014942 45193 0.836 - - 0.836 - - - - - - - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
52. SUCLG2 ENSGALG00000007652 9688 0.833 - - - - - - 0.833 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
53. BRCC3 ENSGALG00000005383 4844 0.833 - - 0.833 - - - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
54. ENSGALG00000009044 ENSGALG00000009044 14492 0.829 - - - - - - 0.829 - - -
55. ENSGALG00000012158 ENSGALG00000012158 11937 0.828 - - 0.828 - - - - - - -
56. CAT ENSGALG00000030187 7534 0.828 - - 0.828 - - - - - - - catalase [Source:NCBI gene;Acc:423600]
57. GHITM ENSGALG00000021262 7159 0.826 - - 0.826 - - - - - - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
58. SPARC ENSGALG00000004184 36410 0.826 - - - - - - 0.826 - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
59. REST 2394 0.825 - - 0.825 - - - - - - - RE1 silencing transcription factor
60. ADIPOR2 ENSGALG00000035533 6523 0.825 - - 0.825 - - - - - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
61. FASN ENSGALG00000040896 17372 0.824 - - - - - - - 0.824 - - fatty acid synthase [Source:NCBI gene;Acc:396061]
62. CNOT8 ENSGALG00000003950 8271 0.819 - - - - - - 0.819 - - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
63. ACBD6 ACBD6 4293 0.819 - - 0.819 - - - - - - -
64. SMAD6 ENSGALG00000025898 3144 0.817 - - - - - - 0.817 - - - SMAD family member 6 [Source:NCBI gene;Acc:374096]
65. UCHL3 ENSGALG00000016921 16208 0.816 - - - - - - 0.816 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
66. SNRNP40 ENSGALG00000000615 32298 0.816 - - - - - - 0.816 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
67. PHLDB2 ENSGALG00000015377 8560 0.816 - - - - - - 0.816 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
68. UQCRC1 ENSGALG00000005789 23201 0.815 - - 0.815 - - - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
69. SETD1B ENSGALG00000004324 2897 0.813 - - 0.813 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
70. DCAF12 ENSGALG00000005800 6419 0.812 - - 0.812 - - - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
71. GNG2 ENSGALG00000027629 9404 0.811 - - - - - - 0.811 - - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
72. MRPS35 ENSGALG00000036730 6327 0.809 - - 0.809 - - - - - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
73. PLA2G12A ENSGALG00000012185 5261 0.809 - - - - - - 0.809 - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
74. METTL23 ENSGALG00000001790 7906 0.809 - - - - - - 0.809 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
75. NFI1 NFI1 6210 0.807 - - 0.807 - - - - - - -
76. CDH11 ENSGALG00000039985 18212 0.807 - - - - - - 0.807 - - - cadherin 11 [Source:NCBI gene;Acc:415797]
77. C11H16ORF80 C11H16ORF80 18673 0.806 - - - - - - 0.806 - - -
78. CKB ENSGALG00000011511 2100 0.805 - - 0.805 - - - - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
79. MRPL30 ENSGALG00000016760 16965 0.805 - - - - - - 0.805 - - - mitochondrial ribosomal protein L30
80. SRP68 ENSGALG00000002062 7370 0.804 - - - - - - 0.804 - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
81. NABP1 ENSGALG00000025884 4195 0.801 - - - - - - 0.801 - - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
82. HNRNPH1 HNRNPH1 8819 0.801 - - 0.801 - - - - - - -
83. SCML2 ENSGALG00000016537 9348 0.801 - - - - - - 0.801 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
84. ATP6V0C ENSGALG00000009229 125870 0.799 - - 0.799 - - - - - - - ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
85. PMPCA ENSGALG00000001950 6766 0.798 - - - - - - 0.798 - - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
86. ITGB1 ENSGALG00000007145 19551 0.798 - - - - - - 0.798 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
87. MAEA ENSGALG00000013310 13230 0.798 - - 0.798 - - - - - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
88. POLR1E ENSGALG00000005395 8953 0.798 - - - - - - 0.798 - - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
89. SENP6 ENSGALG00000015901 8013 0.797 - - 0.797 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
90. HERPUD2 ENSGALG00000040364 6073 0.797 - - - - - - 0.797 - - - HERPUD family member 2 [Source:HGNC Symbol;Acc:HGNC:21915]
91. COL18A1 ENSGALG00000038311 11934 0.796 - - - - - - 0.796 - - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
92. ENSGALG00000017396 ENSGALG00000017396 9028 0.796 - - - - - - 0.796 - - -
93. WTAP ENSGALG00000011660 10811 0.795 - - 0.795 - - - - - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
94. SEC24C ENSGALG00000005181 11132 0.795 - - - - - - 0.795 - - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
95. UTP11L UTP11L 11927 0.795 - - - - - - 0.795 - - -
96. SCCPDH ENSGALG00000010641 8624 0.794 - - - - - - 0.794 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
97. CTBPL ENSGALG00000007642 14238 0.793 - - 0.793 - - - - - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
98. ACOT13 ENSGALG00000013632 5550 0.793 - - - - - - 0.793 - - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
99. NDUFA7 ENSGALG00000000629 14046 0.792 - - - - - - 0.792 - - - NADH:ubiquinone oxidoreductase subunit A7
100. PGAM5 ENSGALG00000002137 7700 0.791 - - - - - - 0.791 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]

There are 395 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA