Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GSDMA

Gene Name Gene ID Reads Annotation
GSDMA ENSGALG00000013495 1650 gasdermin A [Source:NCBI gene;Acc:426132]











Genes with expression patterns similar to GSDMA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GSDMA ENSGALG00000013495 1650 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gasdermin A [Source:NCBI gene;Acc:426132]
2. GDPD4 ENSGALG00000000690 824 1.912 - - 0.912 - - - 1.000 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
3. CDC5L ENSGALG00000016704 22893 1.846 - - 0.875 - - - 0.971 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
4. PSMD13 ENSGALG00000043684 14720 1.79 - - 0.806 - - - 0.984 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
5. COMMD8 ENSGALG00000026279 13509 1.779 - - 0.792 - - - 0.987 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
6. MRPS15 ENSGALG00000044433 15356 1.709 - - 0.737 - - - 0.972 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
7. LHFPL2 ENSGALG00000004437 500 0.997 - - - - - - 0.997 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
8. RPUSD4 ENSGALG00000024326 3788 0.997 - - - - - - 0.997 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
9. LUZP2 ENSGALG00000030151 585 0.997 - - - - - - 0.997 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
10. MAPT ENSGALG00000000625 659 0.997 - - - - - - 0.997 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
11. LYVE1 ENSGALG00000005643 1230 0.997 - - - - - - 0.997 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
12. DNAJC10 ENSGALG00000008862 3114 0.997 - - - - - - 0.997 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
13. CRAC1A CRAC1A 5265 0.997 - - - - - - 0.997 - - -
14. CSDE1 ENSGALG00000002139 1683 0.997 - - - - - - 0.997 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
15. SNAPIN ENSGALG00000026796 11155 0.997 - - - - - - 0.997 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
16. SAV1 ENSGALG00000012341 3313 0.996 - - - - - - 0.996 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
17. APITD1 APITD1 11830 0.996 - - - - - - 0.996 - - -
18. MMADHC ENSGALG00000012473 9026 0.996 - - - - - - 0.996 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
19. LOC425795 ENSGALG00000027696 2357 0.996 - - - - - - 0.996 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
20. ZNF276 ENSGALG00000000513 2410 0.996 - - - - - - 0.996 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
21. ATPAF2 ENSGALG00000004926 3393 0.996 - - - - - - 0.996 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
22. CHL1 ENSGALG00000037856 1565 0.995 - - - - - - 0.995 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
23. TP53INP1 ENSGALG00000041353 6890 0.995 - - - - - - 0.995 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
24. gga-mir-1723 ENSGALG00000025386 6662 0.994 - - - - - - 0.994 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
25. DIS3 ENSGALG00000016930 3696 0.994 - - - - - - 0.994 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
26. ENSGALG00000006730 ENSGALG00000006730 3695 0.994 - - - - - - 0.994 - - -
27. CCDC90B ENSGALG00000037072 5088 0.993 - - - - - - 0.993 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
28. GLT8D1 ENSGALG00000001642 4232 0.993 - - - - - - 0.993 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
29. C6H10ORF32 C6H10ORF32 7694 0.993 - - - - - - 0.993 - - -
30. SH3RF3 ENSGALG00000016810 2169 0.992 - - - - - - 0.992 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
31. SPINT1 ENSGALG00000008469 5735 0.992 - - - - - - 0.992 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
32. PRKG1 ENSGALG00000003805 4654 0.992 - - - - - - 0.992 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
33. GALNTL4 GALNTL4 3548 0.992 - - - - - - 0.992 - - -
34. GCAT ENSGALG00000012312 7906 0.992 - - - - - - 0.992 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
35. CTNNBL1 ENSGALG00000006817 6765 0.991 - - - - - - 0.991 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
36. TTF1 4214 0.99 - - - - - - 0.990 - - - transcription termination factor 1
37. LOC424109 ENSGALG00000008738 3932 0.99 - - - - - - 0.990 - - - alpha-aspartyl dipeptidase
38. POLB ENSGALG00000040828 7462 0.988 - - - - - - 0.988 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
39. NOB1 ENSGALG00000000693 15442 0.988 - - - - - - 0.988 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
40. MYBL2 ENSGALG00000003503 15875 0.988 - - - - - - 0.988 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
41. USO1 ENSGALG00000010878 9506 0.987 - - - - - - 0.987 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
42. FHL3 ENSGALG00000035187 9753 0.987 - - - - - - 0.987 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
43. POLR2C ENSGALG00000001168 10703 0.987 - - - - - - 0.987 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
44. CCAR1 ENSGALG00000004108 13219 0.985 - - - - - - 0.985 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
45. MRPS34 ENSGALG00000001792 14262 0.983 - - - - - - 0.983 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
46. SERBP1 ENSGALG00000011229 30489 0.983 - - - - - - 0.983 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
47. FGD5 ENSGALG00000008546 4031 0.982 - - - - - - 0.982 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
48. ANLN 10479 0.982 - - - - - - 0.982 - - - anillin actin binding protein, transcript variant X2
49. RNF13 ENSGALG00000010411 8749 0.981 - - - - - - 0.981 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
50. EPHA3 ENSGALG00000015403 9811 0.978 - - - - - - 0.978 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
51. PPP3CB ENSGALG00000005243 8794 0.977 - - - - - - 0.977 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
52. ACTR6 ENSGALG00000040976 31271 0.977 - - - - - - 0.977 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
53. CNBP 42704 0.972 - - - - - - 0.972 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
54. ABRACL ENSGALG00000013826 19445 0.97 - - - - - - 0.970 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
55. MRPS36 ENSGALG00000014789 7584 0.968 - - - - - - 0.968 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
56. MOB4 ENSGALG00000008128 10322 0.965 - - - - - - 0.965 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
57. MED1 ENSGALG00000001708 9556 0.965 - - - - - - 0.965 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
58. RPF1 ENSGALG00000008796 9809 0.962 - - - - - - 0.962 - - - ribosome production factor 1 homolog
59. TRIB2 ENSGALG00000016457 17641 0.959 - - - - - - 0.959 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
60. EXOSC7 ENSGALG00000030084 8654 0.957 - - - - - - 0.957 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
61. MRPS26 ENSGALG00000014118 27422 0.951 - - - - - - 0.951 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
62. ENSGALG00000013825 ENSGALG00000013825 16473 0.949 - - - - - - 0.949 - - -
63. SNX17 ENSGALG00000032468 13519 0.948 - - - - - - 0.948 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
64. PELI1 ENSGALG00000008837 11561 0.948 - - - - - - 0.948 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
65. EZH2 ENSGALG00000043399 15881 0.946 - - - - - - 0.946 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
66. STAG2 ENSGALG00000008482 13629 0.944 - - - - - - 0.944 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
67. CCT5 ENSGALG00000013041 56190 0.944 - - - - - - 0.944 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
68. TAF12 ENSGALG00000000991 8709 0.942 - - - - - - 0.942 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
69. LOC407092 ENSGALG00000013809 10706 0.94 - - - - - - 0.940 - - - AD012Z, transcript variant X5
70. ZDHHC6 ENSGALG00000008870 16575 0.938 - - - - - - 0.938 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
71. DDX18 ENSGALG00000012147 12463 0.935 - - - - - - 0.935 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
72. ATP8B4 ENSGALG00000002326 456 0.934 - - 0.934 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
73. RRN3 ENSGALG00000041989 3934 0.934 - - 0.934 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
74. TPI1 ENSGALG00000014526 43273 0.934 - - - - - - 0.934 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
75. ABCC3 ENSGALG00000007522 340 0.933 - - 0.933 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
76. ATP6V0A2 ENSGALG00000003194 4824 0.933 - - 0.933 - - - - - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
77. KCTD3 ENSGALG00000009678 335 0.933 - - 0.933 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
78. PTDSS2 ENSGALG00000004300 682 0.933 - - 0.933 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
79. WHSC1 1712 0.933 - - 0.933 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
80. MED12 ENSGALG00000036322 814 0.932 - - 0.932 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
81. BUB3 ENSGALG00000009681 36055 0.932 - - - - - - 0.932 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
82. CEP104 ENSGALG00000000978 1130 0.932 - - 0.932 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
83. VDAC3 ENSGALG00000041463 21595 0.931 - - - - - - 0.931 - - - voltage dependent anion channel 3, transcript variant X9
84. F2R ENSGALG00000014983 106 0.931 - - 0.931 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
85. UBR2 ENSGALG00000009906 7717 0.93 - - 0.930 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
86. TBL1X ENSGALG00000040006 28597 0.93 - - - - - - 0.930 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
87. SLC37A3 ENSGALG00000012849 836 0.929 - - 0.929 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
88. SNRB SNRB 4477 0.929 - - 0.929 - - - - - - -
89. NXPE3 ENSGALG00000015344 111 0.929 - - 0.929 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
90. SZT2 ENSGALG00000028561 255 0.928 - - 0.928 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
91. ENSGALG00000002020 ENSGALG00000002020 183 0.928 - - 0.928 - - - - - - -
92. OSGIN2 ENSGALG00000042840 83 0.928 - - 0.928 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
93. AKAP10 ENSGALG00000004679 103 0.928 - - 0.928 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
94. UEVLD ENSGALG00000006342 164 0.927 - - 0.927 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
95. RQCD1 RQCD1 110 0.927 - - 0.927 - - - - - - -
96. ENSGALG00000020103 ENSGALG00000020103 64 0.927 - - 0.927 - - - - - - -
97. U4 U4 69 0.927 - - 0.927 - - - - - - -
98. FBXL5 ENSGALG00000014510 245 0.927 - - 0.927 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
99. ENSGALG00000004931 ENSGALG00000004931 2737 0.927 - - 0.927 - - - - - - -
100. ITGB4 ENSGALG00000002389 44 0.926 - - 0.926 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]

There are 473 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA