Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GRIN1

Gene Name Gene ID Reads Annotation
GRIN1 ENSGALG00000008898 18 glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]











Genes with expression patterns similar to GRIN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GRIN1 ENSGALG00000008898 18 5 - - - 1.000 1.000 - 1.000 1.000 - 1.000 glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
2. ENSGALG00000023694 ENSGALG00000023694 45 1.966 - - - 1.000 - - 0.966 - - -
3. BRSK2 ENSGALG00000006681 158 1.715 - - - - - - 1.000 0.715 - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
4. CCDC152 CCDC152 28 1.715 - - - 1.000 - - - 0.715 - -
5. FRS2 ENSGALG00000009966 63 1.715 - - - - 0.894 - 0.821 - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
6. MGMT ENSGALG00000042949 53 1.685 - - - - - - 0.970 0.715 - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
7. CASR ENSGALG00000038405 53 1.564 - - - - - - 0.863 0.701 - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
8. PCGF5 ENSGALG00000006502 2 1 - - - - - - - - - 1.000 polycomb group ring finger 5 [Source:NCBI gene;Acc:423796]
9. ABCA1 ENSGALG00000015433 11 1 - - - 1.000 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
10. RBMS3 ENSGALG00000011439 25 1 - - - 1.000 - - - - - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
11. GTPBP6 ENSGALG00000016717 17 1 - - - 1.000 - - - - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
12. RNF182 ENSGALG00000012700 4 1 - - - 1.000 - - - - - - ring finger protein 182 [Source:HGNC Symbol;Acc:HGNC:28522]
13. CACNB2 ENSGALG00000008591 53 1 - - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
14. RAD21L1 ENSGALG00000006186 2 1 - - - - - - - - - 1.000 RAD21 cohesin complex component like 1 [Source:HGNC Symbol;Acc:HGNC:16271]
15. MGAT5B ENSGALG00000001740 2 1 - - - - - - - - - 1.000 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:24140]
16. ENSGALG00000028479 ENSGALG00000028479 5 1 - - - - - - - - - 1.000
17. DCAKD ENSGALG00000000870 4 1 - - - - - - - - - 1.000 dephospho-CoA kinase domain containing [Source:HGNC Symbol;Acc:HGNC:26238]
18. AJAP1 ENSGALG00000027265 11 1 - - - 1.000 - - - - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
19. RD RD 99 1 - - - 1.000 - - - - - -
20. CSF2RA ENSGALG00000016693 5 1 - - - 1.000 - - - - - - colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
21. EVI2A ENSGALG00000039084 13 1 - - - - - - - - - 1.000 ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
22. GBX2 ENSGALG00000013342 5 1 - - - - - - - - - 1.000 gastrulation brain homeobox 2 [Source:NCBI gene;Acc:395950]
23. C2orf50 ENSGALG00000046449 17 1 - - - 1.000 - - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
24. DOCK3 ENSGALG00000002335 5 1 - - - - - - - - - 1.000 dedicator of cytokinesis 3 [Source:HGNC Symbol;Acc:HGNC:2989]
25. SLC14A2 SLC14A2 4 1 - - - 1.000 - - - - - -
26. ATP10B ENSGALG00000001662 15 1 - - - - - - - - - 1.000 ATPase phospholipid transporting 10B (putative) [Source:HGNC Symbol;Acc:HGNC:13543]
27. NT5E ENSGALG00000015833 5 1 - - - 1.000 - - - - - - 5'-nucleotidase ecto
28. ENSGALG00000028778 ENSGALG00000028778 47 1 - - - - - - - - - 1.000
29. TIMP3_1 ENSGALG00000028627 24 1 - - - - - - - - - 1.000 TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
30. ENSGALG00000000407 ENSGALG00000000407 32 1 - - - - - - - - - 1.000
31. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - - - - - - - 1.000
32. RNF217 ENSGALG00000013651 1 1 - - - - - - - - - 1.000 ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
33. C19orf44 C19orf44 24 1 - - - - - - - - - 1.000
34. VANGL2 ENSGALG00000030643 3 1 - - - 1.000 - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
35. ZIC4 ENSGALG00000006810 2 1 - - - 1.000 - - - - - - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]
36. ADRA2C ENSGALG00000015608 42 1 - - - - - - - - - 1.000 adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
37. ENSGALG00000027026 ENSGALG00000027026 3 1 - - - 1.000 - - - - - -
38. FBXL22 ENSGALG00000003401 1 1 - - - 1.000 - - - - - - F-box and leucine rich repeat protein 22 [Source:HGNC Symbol;Acc:HGNC:27537]
39. SLC1A7 ENSGALG00000010673 1 1 - - - - - - - - - 1.000 solute carrier family 1 member 7 [Source:HGNC Symbol;Acc:HGNC:10945]
40. FOXN4 ENSGALG00000005062 7 1 - - - - - - - - - 1.000 forkhead box N4 [Source:NCBI gene;Acc:416898]
41. DCUN1D3 ENSGALG00000002267 6 1 - - - 1.000 - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
42. CSGALNACT1 ENSGALG00000010125 5 1 - - - - - - - - - 1.000 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]
43. SMURF1 ENSGALG00000004655 4 1 - - - 1.000 - - - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:16807]
44. HMGCLL1 ENSGALG00000016294 33 1 - - - - - - 1.000 - - - 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
45. ADRA1D ENSGALG00000038787 54 1 - - - - - - 1.000 - - - adrenoceptor alpha 1D
46. ABCC5 ENSGALG00000008369 1 1 - - - - - - - - - 1.000 ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]
47. MYLK2 ENSGALG00000006273 5 1 - - - 1.000 - - - - - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
48. FAM198A ENSGALG00000037533 7 1 - - - - - - - - - 1.000 family with sequence similarity 198 member A [Source:HGNC Symbol;Acc:HGNC:24485]
49. OCSTAMP ENSGALG00000044719 10 1 - - - 1.000 - - - - - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
50. MCAM ENSGALG00000030027 26 0.991 - - - - 0.991 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
51. SI ENSGALG00000009511 5 0.987 - - - - - - 0.987 - - - sucrase-isomaltase
52. CA15L ENSGALG00000005896 4 0.987 - - - - - - 0.987 - - - carbonic anhydrase 15-like
53. ENSGALG00000028577 ENSGALG00000028577 4 0.987 - - - - - - 0.987 - - -
54. LEKR1 50 0.987 - - - - - - 0.987 - - - leucine, glutamate and lysine rich 1, transcript variant X17
55. SLC6A11 ENSGALG00000004879 16 0.987 - - - - - - 0.987 - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
56. NIM1 NIM1 18 0.987 - - - - - - 0.987 - - -
57. BFSP1 ENSGALG00000008735 17 0.987 - - - - - - 0.987 - - - beaded filament structural protein 1 [Source:NCBI gene;Acc:396056]
58. TEKT1 ENSGALG00000006064 18 0.987 - - - - - - 0.987 - - - tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
59. ASB18 ENSGALG00000046564 7 0.987 - - - - - - 0.987 - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
60. CYR61 ENSGALG00000008661 43 0.986 - - - - 0.986 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
61. TDRD12 ENSGALG00000004704 19 0.983 - - - - 0.983 - - - - - tudor domain containing 12, transcript variant X3
62. C10orf67 15 0.979 - - - - 0.979 - - - - - chromosome 10 open reading frame 67, transcript variant X2
63. IRG1 IRG1 21 0.979 - - - - 0.979 - - - - -
64. TJP3 ENSGALG00000000748 45 0.978 - - - - 0.978 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
65. TMCC1 ENSGALG00000008487 65 0.972 - - - - 0.972 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
66. ENSGALG00000025953 ENSGALG00000025953 65 0.971 - - - - 0.971 - - - - -
67. LRP3 ENSGALG00000004853 13 0.971 - - - - - - 0.971 - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
68. DNAH12 ENSGALG00000005601 80 0.971 - - - - - - 0.971 - - - dynein, axonemal, heavy chain 12, transcript variant X6
69. PHC2 62 0.968 - - - - 0.968 - - - - - polyhomeotic homolog 2
70. SAMSN1 ENSGALG00000040926 88 0.966 - - - - - - 0.966 - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
71. LHFPL5 ENSGALG00000039170 247 0.965 - - - - - - 0.965 - - - LHFPL tetraspan subfamily member 5 [Source:NCBI gene;Acc:378916]
72. SLC24A3 ENSGALG00000008445 8 0.963 - - - - - - - - - 0.963 solute carrier family 24 member 3 [Source:HGNC Symbol;Acc:HGNC:10977]
73. LMTK2 ENSGALG00000003479 46 0.961 - - - - 0.961 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
74. SDCCAG3 1208 0.96 - - - - 0.960 - - - - - serologically defined colon cancer antigen 3
75. CCDC39 ENSGALG00000021855 23 0.957 - - - - 0.957 - - - - - coiled-coil domain containing 39
76. VSX2 ENSGALG00000033517 30 0.956 - - - - - - - - - 0.956 visual system homeobox 2 [Source:NCBI gene;Acc:395536]
77. FAM208B 24 0.953 - - - - 0.953 - - - - - family with sequence similarity 208 member B, transcript variant X3
78. SYT10 ENSGALG00000012911 17 0.952 - - - - 0.952 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
79. RTDR1 RTDR1 104 0.951 - - - - 0.951 - - - - -
80. C17orf62 C17orf62 37 0.948 - - - - - - - 0.948 - -
81. SLC7A5 ENSGALG00000005845 261 0.939 - - - - - - 0.939 - - - solute carrier family 7 member 5 [Source:NCBI gene;Acc:415832]
82. ENSGALG00000026756 ENSGALG00000026756 134 0.939 - - - - - - - - - 0.939
83. TMEM164 ENSGALG00000008076 734 0.938 - - - - 0.938 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
84. MAP3K21 ENSGALG00000011008 54 0.937 - - - - 0.937 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
85. NLGN4 NLGN4 283 0.936 - - - - - - 0.936 - - -
86. SPTSSBL ENSGALG00000026131 70 0.935 - - - - - - 0.935 - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
87. LARP4B ENSGALG00000006672 57 0.934 - - - - 0.934 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
88. ENSGALG00000024018 ENSGALG00000024018 37 0.931 - - - - 0.931 - - - - -
89. STARD8 ENSGALG00000032419 1 0.93 - - - - - - - - - 0.930 StAR related lipid transfer domain containing 8 [Source:HGNC Symbol;Acc:HGNC:19161]
90. NAAA ENSGALG00000011529 401 0.929 - - - - - - 0.929 - - - N-acylethanolamine acid amidase [Source:HGNC Symbol;Acc:HGNC:736]
91. UNC13C ENSGALG00000035935 120 0.928 - - - - - - 0.928 - - - unc-13 homolog C [Source:HGNC Symbol;Acc:HGNC:23149]
92. CRAT ENSGALG00000037443 78 0.923 - - - - 0.923 - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
93. SEZ6L ENSGALG00000032415 56 0.923 - - - 0.923 - - - - - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
94. TRIM55 ENSGALG00000041327 1097 0.923 - - - - - - 0.923 - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
95. RASD1 ENSGALG00000004860 133 0.923 - - - 0.923 - - - - - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
96. SDR42E1 ENSGALG00000005456 586 0.921 - - - - 0.921 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
97. PAAF1 ENSGALG00000017318 605 0.919 - - - - - - 0.919 - - - proteasomal ATPase associated factor 1 [Source:NCBI gene;Acc:419061]
98. TRPS1 ENSGALG00000031700 39 0.918 - - - - - - - 0.918 - - transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
99. AANAT ENSGALG00000001955 23 0.918 - - - - 0.918 - - - - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
100. ERN2 ENSGALG00000027592 186 0.918 - - - - 0.918 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]

There are 199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA