Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GPHN

Gene Name Gene ID Reads Annotation
GPHN ENSGALG00000009587 3045 gephyrin [Source:NCBI gene;Acc:428878]











Genes with expression patterns similar to GPHN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GPHN ENSGALG00000009587 3045 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 gephyrin [Source:NCBI gene;Acc:428878]
2. WDR45B ENSGALG00000001563 5870 1.567 - - - - - - 0.731 0.836 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
3. HVCN1 ENSGALG00000004562 2550 1.555 - - - - - - 0.704 0.851 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
4. HERC2 ENSGALG00000016739 9900 1.473 - - 0.745 - - - 0.728 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
5. FBXO4 ENSGALG00000014851 2333 0.972 - - - - - - - 0.972 - - F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]
6. ZNF451 ENSGALG00000016282 3380 0.97 - - - - - - - 0.970 - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
7. ARIH2 ENSGALG00000006956 3692 0.961 - - - - - - - 0.961 - - ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
8. HAT1 ENSGALG00000009525 24864 0.902 - - - - - - - 0.902 - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
9. SUCLG2 ENSGALG00000007652 9688 0.897 - - - - - - - 0.897 - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
10. ENSGALG00000020092 ENSGALG00000020092 3067 0.884 - - - - - - - 0.884 - -
11. MBNL2 ENSGALG00000016890 3162 0.881 - - - - - - - 0.881 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
12. TYW3 ENSGALG00000032549 4869 0.881 - - - - - - - 0.881 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
13. FGD5 ENSGALG00000008546 4031 0.874 - - - - - - - 0.874 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
14. RABL5 RABL5 5264 0.874 - - - - - - - 0.874 - -
15. CAPN9 158 0.87 - - - - - - - 0.870 - - calpain 9
16. WNK2 ENSGALG00000038850 4712 0.87 - - - - - - - 0.870 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
17. TOR1B TOR1B 197 0.87 - - - - - - - 0.870 - -
18. NCS1 ENSGALG00000012710 1104 0.87 - - - - - - - 0.870 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
19. SLC26A8 ENSGALG00000040498 253 0.87 - - - - - - - 0.870 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
20. YTHDF3 ENSGALG00000039774 170 0.87 - - - - - - - 0.870 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
21. FPGT ENSGALG00000026958 788 0.87 - - - - - - - 0.870 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
22. NKX-6.2 NKX-6.2 1370 0.869 - - - - - - - 0.869 - -
23. NR3C2 ENSGALG00000010035 603 0.869 - - - - - - - 0.869 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
24. LOC420160 ENSGALG00000004252 188 0.869 - - - - - - - 0.869 - - cathepsin L1-like, transcript variant X3
25. VASH1 ENSGALG00000043036 1235 0.869 - - - - - - - 0.869 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
26. LIPA ENSGALG00000006378 4414 0.868 - - - - - - - 0.868 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
27. ENSGALG00000001591 ENSGALG00000001591 784 0.868 - - - - - - - 0.868 - -
28. RASGEF1B 2014 0.867 - - - - - - - 0.867 - - RasGEF domain family member 1B, transcript variant X8
29. CAPRIN2 1473 0.867 - - - - - - - 0.867 - - caprin family member 2, transcript variant X7
30. FTSJ2 FTSJ2 2951 0.867 - - - - - - - 0.867 - -
31. KPNA4 ENSGALG00000009549 3674 0.867 - - - - - - - 0.867 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
32. SETD2 ENSGALG00000042051 2981 0.866 - - - - - - - 0.866 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
33. TBCE ENSGALG00000013950 3076 0.865 - - - - - - - 0.865 - - tubulin folding cofactor E
34. SLX4 ENSGALG00000031841 1208 0.865 - - - - - - - 0.865 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
35. GNE ENSGALG00000015331 1577 0.865 - - - - - - - 0.865 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
36. SEMA3F ENSGALG00000029621 2079 0.865 - - - - - - - 0.865 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
37. GNB1L ENSGALG00000001925 1981 0.864 - - - - - - - 0.864 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
38. HIP1R ENSGALG00000031511 1981 0.863 - - - - - - - 0.863 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
39. AARSD1 ENSGALG00000002880 3068 0.862 - - - - - - - 0.862 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
40. FNTA ENSGALG00000015397 3741 0.862 - - - - - - - 0.862 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
41. PLA2G7 ENSGALG00000016713 2100 0.861 - - - - - - - 0.861 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
42. ENSGALG00000005615 ENSGALG00000005615 4354 0.86 - - - - - - - 0.860 - -
43. TLN2 2295 0.86 - - - - - - - 0.860 - - talin 2, transcript variant X5
44. CHST2 ENSGALG00000034507 6172 0.859 - - - - - - - 0.859 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
45. CXorf23 1582 0.859 - - - - - - - 0.859 - - chromosome X open reading frame 23, transcript variant X3
46. HMOX1 ENSGALG00000012550 1186 0.858 - - - - - - - 0.858 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
47. MAP4K5 ENSGALG00000012321 3036 0.858 - - - - - - - 0.858 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
48. PAM16 9684 0.857 - - - - - - - 0.857 - - presequence translocase associated motor 16 homolog, transcript variant X2
49. C2CD2 ENSGALG00000016148 2734 0.857 - - - - - - - 0.857 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
50. EXOSC1 ENSGALG00000039917 5259 0.856 - - - - - - - 0.856 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
51. C5orf63 C5orf63 3718 0.855 - - - - - - - 0.855 - -
52. DLGAP4 ENSGALG00000001046 6872 0.855 - - - - - - - 0.855 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
53. MRPL10 ENSGALG00000014387 12386 0.854 - - - - - - - 0.854 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
54. CABLES1 ENSGALG00000014998 1636 0.854 - - - - - - - 0.854 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
55. NID2 ENSGALG00000012394 6717 0.852 - - - - - - - 0.852 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
56. WDR82 ENSGALG00000025904 4783 0.852 - - - - - - - 0.852 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
57. VPS26A ENSGALG00000004174 9198 0.851 - - - - - - - 0.851 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
58. UTP23 ENSGALG00000032400 3601 0.851 - - - - - - - 0.851 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
59. MRPL28 ENSGALG00000007473 19134 0.849 - - - - - - - 0.849 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
60. C1orf21 ENSGALG00000020922 4035 0.848 - - - - - - - 0.848 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
61. FGD3 ENSGALG00000005237 4410 0.846 - - - - - - - 0.846 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
62. UBE2Q2 3861 0.846 - - - - - - - 0.846 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
63. ITCH ENSGALG00000040474 2646 0.845 - - - - - - - 0.845 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
64. POLDIP2 ENSGALG00000003211 11664 0.845 - - - - - - - 0.845 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
65. CTSA ENSGALG00000006876 5380 0.844 - - - - - - - 0.844 - - cathepsin A [Source:NCBI gene;Acc:428163]
66. CPEB2 ENSGALG00000014516 1187 0.842 - - - - - - - 0.842 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
67. TAF12 ENSGALG00000000991 8709 0.84 - - - - - - - 0.840 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
68. THOC2 ENSGALG00000008507 9501 0.84 - - - - - - - 0.840 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
69. EMC1 ENSGALG00000003969 6876 0.838 - - - - - - - 0.838 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
70. AKR1B10L3 ENSGALG00000019284 5869 0.836 - - - - - - - 0.836 - - aldo-keto reductase family 1 member B10-like 3
71. METTL6 ENSGALG00000040665 4467 0.836 - - - - - - - 0.836 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
72. TARS ENSGALG00000003288 12702 0.834 - - - - - - - 0.834 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
73. C10orf11 C10orf11 3087 0.834 - - - - - - - 0.834 - -
74. NPEPL1 ENSGALG00000007533 5908 0.833 - - - - - - - 0.833 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
75. NPM3 ENSGALG00000032329 21138 0.829 - - - - - - - 0.829 - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
76. UBE2J2 ENSGALG00000001848 6527 0.826 - - - - - - - 0.826 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
77. CDC73 ENSGALG00000002469 4586 0.825 - - - - - - - 0.825 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
78. PHF20L1 ENSGALG00000033205 7598 0.821 - - - - - - - 0.821 - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
79. CSK ENSGALG00000031270 11541 0.821 - - - - - - - 0.821 - - C-terminal Src kinase [Source:NCBI gene;Acc:396396]
80. PCDH1 ENSGALG00000002553 2938 0.82 - - - - - - - 0.820 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
81. SRP9 ENSGALG00000026009 12418 0.818 - - - - - - - 0.818 - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
82. TCEA2 ENSGALG00000005976 9143 0.815 - - - - - - - 0.815 - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
83. POLR2C ENSGALG00000001168 10703 0.813 - - - - - - - 0.813 - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
84. RAP1A ENSGALG00000001476 5287 0.813 - - - - - - - 0.813 - - RAP1A, member of RAS oncogene family
85. BMP2K ENSGALG00000010885 37 0.811 - - 0.811 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
86. PDPK1 ENSGALG00000006418 13412 0.811 - - - - - - - 0.811 - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
87. SRPK2 ENSGALG00000008154 7385 0.809 - - - - - - - 0.809 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]
88. ASPM ENSGALG00000032398 12784 0.808 - - - - - - - 0.808 - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
89. TBCD ENSGALG00000001503 7880 0.807 - - - - - - 0.807 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
90. SGCB ENSGALG00000013968 3214 0.805 - - - - - - 0.805 - - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
91. PAPSS1 ENSGALG00000010542 5631 0.803 - - - - - - 0.803 - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
92. TNRC6A ENSGALG00000006068 9166 0.802 - - - - - - - 0.802 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
93. FANCB ENSGALG00000016569 1193 0.8 - - 0.800 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
94. LUC7L3 ENSGALG00000007386 11944 0.8 - - - - - - - 0.800 - - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
95. RNPS1 ENSGALG00000009288 13588 0.791 - - - - - - 0.791 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
96. KLHL13 KLHL13 2712 0.788 - - - - - - 0.788 - - -
97. ABCC1 ENSGALG00000006646 2596 0.787 - - 0.787 - - - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
98. HIPK3 ENSGALG00000011695 6842 0.784 - - - - - - - 0.784 - - homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
99. TBC1D8B ENSGALG00000009040 75 0.784 - - 0.784 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
100. FAM76B ENSGALG00000017202 688 0.784 - - 0.784 - - - - - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]

There are 226 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA