Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GPC4

Gene Name Gene ID Reads Annotation
GPC4 ENSGALG00000006080 56498 glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]











Genes with expression patterns similar to GPC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GPC4 ENSGALG00000006080 56498 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
2. CZH9ORF80 CZH9ORF80 12760 1.609 - - - - - - 0.838 0.771 - -
3. TMEM167A ENSGALG00000027332 13862 1.591 - - - - - - 0.887 0.704 - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
4. C6ORF162 C6ORF162 4217 1.585 - - - - - - 0.838 0.747 - -
5. RIPK1 ENSGALG00000012827 3405 1.561 - - - - - - 0.814 0.747 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
6. LGR4 ENSGALG00000040834 5529 1.541 - - - - - - 0.802 0.739 - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
7. LGALS1 ENSGALG00000012420 13993 1.525 - - 0.768 - - - 0.757 - - - galectin 1 [Source:NCBI gene;Acc:396491]
8. YOD1 ENSGALG00000037597 2989 1.517 - - - - - - 0.794 0.723 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
9. PAXIP1 ENSGALG00000036064 3120 1.502 - - - - - - 0.780 0.722 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
10. PDZRN3 ENSGALG00000007819 4139 1.497 - - - - - - 0.785 0.712 - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
11. LTN1 ENSGALG00000015804 3784 1.484 - - - - - - 0.750 0.734 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
12. ACBD3 ENSGALG00000009246 8405 1.479 - - - - - - 0.758 0.721 - - acyl-CoA binding domain containing 3 [Source:NCBI gene;Acc:421317]
13. FNDC5 ENSGALG00000003567 3328 1.475 - - 0.730 - - - - 0.745 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
14. SRFBP1 ENSGALG00000005316 6826 1.474 - - - - - - 0.740 0.734 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
15. SH3GLB1 ENSGALG00000006284 12764 1.468 - - - - - - 0.750 0.718 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
16. EPFIP1L ENSGALG00000007683 18050 1.464 - - - - - - 0.737 0.727 - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
17. PRPSAP2 ENSGALG00000005064 5549 1.463 - - - - - - 0.722 0.741 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
18. PIK3IP1 ENSGALG00000006942 8388 1.463 - - 0.746 - - - 0.717 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
19. THAP5 ENSGALG00000009494 6540 1.459 - - - - - - 0.743 0.716 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
20. gga-mir-6683 ENSGALG00000026767 5682 1.436 - - - - - - 0.713 0.723 - - gga-mir-6683 [Source:miRBase;Acc:MI0022504]
21. LRRFIP2 ENSGALG00000033102 8250 1.431 - - - - - - 0.701 0.730 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
22. CEP78 ENSGALG00000015179 5227 1.429 - - - - - - 0.722 0.707 - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
23. SMU1 ENSGALG00000002014 8136 1.422 - - - - - - 0.704 0.718 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
24. RAD50 ENSGALG00000006794 4308 1.412 - - - - - - 0.704 0.708 - - RAD50 double strand break repair protein, transcript variant X4
25. YWHAZ ENSGALG00000031387 84985 0.904 - - - - - - 0.904 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
26. AP2A2 ENSGALG00000006799 13874 0.904 - - - - - - 0.904 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
27. SMC4 ENSGALG00000009553 15715 0.902 - - - - - - 0.902 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
28. CYC CYC 8740 0.901 - - - - - - 0.901 - - -
29. HSPA4 ENSGALG00000040882 20966 0.894 - - - - - - 0.894 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
30. NOC4L ENSGALG00000002272 9644 0.889 - - - - - - 0.889 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
31. CDC45 ENSGALG00000001616 8432 0.887 - - - - - - 0.887 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
32. C1QBP ENSGALG00000001654 34814 0.887 - - - - - - 0.887 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
33. FAM177A1 ENSGALG00000010046 4318 0.885 - - - - - - 0.885 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
34. GABARAPL2 ENSGALG00000003208 9195 0.884 - - - - - - 0.884 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
35. ENSGALG00000014171 ENSGALG00000014171 10383 0.879 - - - - - - 0.879 - - -
36. FBXO3 ENSGALG00000034029 15089 0.879 - - - - - - 0.879 - - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
37. ACTR2 ENSGALG00000008779 17812 0.878 - - - - - - 0.878 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
38. NASP ENSGALG00000010255 28423 0.876 - - - - - - 0.876 - - - nuclear autoantigenic sperm protein, transcript variant X3
39. PRELID1 ENSGALG00000002990 55592 0.873 - - - - - - 0.873 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
40. ITGB1 ENSGALG00000007145 19551 0.871 - - - - - - 0.871 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
41. EIF4A2 ENSGALG00000008684 58507 0.871 - - - - - - 0.871 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
42. ZNF593 ENSGALG00000000542 79105 0.871 - - - - - - 0.871 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
43. EHD3 ENSGALG00000009086 14407 0.87 - - - - - - 0.870 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
44. TTC37 ENSGALG00000014670 5715 0.868 - - - - - - 0.868 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
45. RANBP1 ENSGALG00000002107 17715 0.868 - - - - - - 0.868 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
46. RAB11A ENSGALG00000007615 9154 0.867 - - - - - - 0.867 - - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
47. PREP ENSGALG00000015405 17050 0.867 - - - - - - 0.867 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
48. MLST8 ENSGALG00000005878 8116 0.865 - - - - - - 0.865 - - - MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
49. ACTN1 ENSGALG00000042458 10477 0.865 - - - - - - 0.865 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
50. NCDN ENSGALG00000002408 6180 0.862 - - - - - - 0.862 - - - neurochondrin [Source:NCBI gene;Acc:419633]
51. PSMB2 ENSGALG00000026421 51885 0.862 - - - - - - 0.862 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
52. C4H4ORF52 C4H4ORF52 8116 0.86 - - - - - - 0.860 - - -
53. CLINT1 ENSGALG00000003702 11269 0.859 - - - - - - 0.859 - - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
54. NUPL1 NUPL1 8197 0.858 - - - - - - 0.858 - - -
55. SPCS3 ENSGALG00000010839 19106 0.858 - - - - - - 0.858 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
56. TOR1AIP1 ENSGALG00000029238 5843 0.857 - - - - - - 0.857 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
57. GGA.31975 GGA.31975 8825 0.857 - - - - - - 0.857 - - -
58. INCENP ENSGALG00000007537 16617 0.854 - - - - - - 0.854 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
59. RABGGTB ENSGALG00000011388 11654 0.853 - - - - - - 0.853 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
60. C1H12ORF23 C1H12ORF23 13234 0.852 - - - - - - 0.852 - - -
61. SNRNP27 ENSGALG00000013883 22212 0.85 - - - - - - 0.850 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
62. KLHDC4 ENSGALG00000037315 9828 0.85 - - - - - - 0.850 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
63. DERL1 ENSGALG00000033950 15074 0.849 - - - - - - 0.849 - - - derlin 1 [Source:NCBI gene;Acc:420350]
64. TERF2 ENSGALG00000000657 7865 0.848 - - - - - - 0.848 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
65. RPF2 ENSGALG00000037087 12788 0.847 - - - - - - 0.847 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
66. FXR1 ENSGALG00000008864 10250 0.845 - - - - - - 0.845 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
67. ATP5L ENSGALG00000006899 69561 0.845 - - - - - - 0.845 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
68. HERC2 ENSGALG00000016739 9900 0.844 - - - - - - 0.844 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
69. SEC11A ENSGALG00000037553 32123 0.844 - - - - - - 0.844 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
70. SAR1B ENSGALG00000038753 6493 0.844 - - - - - - 0.844 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
71. RPS28 ENSGALG00000024398 244056 0.843 - - - - - - 0.843 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
72. PHLDB2 ENSGALG00000015377 8560 0.843 - - - - - - 0.843 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
73. Sep-05 Sep-05 5887 0.843 - - - - - - 0.843 - - -
74. BMS1 ENSGALG00000002624 8339 0.842 - - - - - - 0.842 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
75. LIMD1 ENSGALG00000035623 7282 0.841 - - - - - - 0.841 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
76. GLRX3 ENSGALG00000010464 22578 0.841 - - - - - - 0.841 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
77. FCF1 ENSGALG00000010275 24928 0.841 - - - - - - 0.841 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
78. MAP3K7 ENSGALG00000015596 15164 0.841 - - - - - - 0.841 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
79. LSM5 ENSGALG00000041625 22307 0.841 - - - - - - 0.841 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
80. FKBP12 FKBP12 64317 0.84 - - - - - - 0.840 - - -
81. TXNDC17 ENSGALG00000027950 45004 0.84 - - - - - - 0.840 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
82. TMEM184C ENSGALG00000010019 7856 0.84 - - - - - - 0.840 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
83. WDR43 ENSGALG00000032529 12235 0.84 - - - - - - 0.840 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
84. SAFB2 ENSGALG00000001948 10238 0.839 - - - - - - 0.839 - - - scaffold attachment factor B2, transcript variant X6
85. MRPL15 ENSGALG00000041086 16820 0.838 - - - - - - 0.838 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
86. RIOK2 ENSGALG00000015288 6280 0.837 - - - - - - 0.837 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
87. NDUFV2 ENSGALG00000036625 29234 0.837 - - - - - - 0.837 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
88. SEC23A_1 ENSGALG00000010150 14745 0.836 - - - - - - 0.836 - - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
89. GGA.1330 GGA.1330 11281 0.835 - - - - - - 0.835 - - -
90. MED17 ENSGALG00000017218 5821 0.834 - - - - - - 0.834 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
91. FANCL ENSGALG00000030022 7423 0.834 - - - - - - 0.834 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
92. FAM160B1 ENSGALG00000031404 3153 0.834 - - - - - - 0.834 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
93. SCCPDH ENSGALG00000010641 8624 0.833 - - - - - - 0.833 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
94. UTP11L UTP11L 11927 0.833 - - - - - - 0.833 - - -
95. COMMD4 ENSGALG00000001572 31664 0.833 - - - - - - 0.833 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
96. BRP44 BRP44 17093 0.833 - - - - - - 0.833 - - -
97. RBBP4 ENSGALG00000003522 72455 0.832 - - - - - - 0.832 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
98. TMX3 ENSGALG00000013757 6387 0.832 - - - - - - 0.832 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
99. AKAP1 ENSGALG00000005575 12051 0.832 - - - - - - 0.832 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
100. NUP50 ENSGALG00000014222 11743 0.832 - - - - - - 0.832 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]

There are 850 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA