Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GPC3

Gene Name Gene ID Reads Annotation
GPC3 ENSGALG00000006087 3744 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]











Genes with expression patterns similar to GPC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GPC3 ENSGALG00000006087 3744 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
2. DSP ENSGALG00000012790 17884 2.365 - - - - - 0.743 - - 0.752 0.870 desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
3. MED4 ENSGALG00000016995 3309 2.299 - - - - - - 0.703 0.832 0.764 - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
4. HYOU1 ENSGALG00000007659 3555 1.67 - - - - - - 0.842 0.828 - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
5. UBE2V2 ENSGALG00000028133 7044 1.598 - - - - - - 0.787 0.811 - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
6. GSTA GSTA 3130 1.596 - - - - - - - 0.802 0.794 -
7. LYAR ENSGALG00000015000 10756 1.569 - - - - - - 0.785 0.784 - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
8. ZYX ENSGALG00000014688 8686 1.563 - - - - - - 0.817 0.746 - - zyxin [Source:NCBI gene;Acc:418300]
9. CLCN7 ENSGALG00000030826 3173 1.548 - - - - - - 0.780 - 0.768 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
10. GREB1 ENSGALG00000016455 12794 1.544 - - - - - 0.804 - - - 0.740 growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
11. KANK1 ENSGALG00000010158 3780 1.514 - - - - - - 0.808 0.706 - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
12. NAV2 ENSGALG00000003999 6587 1.51 - 0.759 - - - 0.751 - - - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
13. TMLHE ENSGALG00000007443 3619 1.493 - - - - - - - 0.775 0.718 - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
14. INTS6 ENSGALG00000017018 3083 1.488 - - - - - - 0.722 0.766 - - integrator complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14879]
15. TALPID3 TALPID3 1896 1.48 - - - - - - - 0.720 0.760 -
16. TLCD2 ENSGALG00000021592 1166 1.471 - - - - - - 0.755 - 0.716 - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
17. COL6A2 ENSGALG00000039216 892 1.463 - - - - - - - 0.706 0.757 - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
18. EAPP ENSGALG00000010007 5080 1.455 - - - - - - - 0.749 - 0.706 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
19. CENPC1 CENPC1 3324 1.452 - - - - - - 0.729 0.723 - -
20. ENSGALG00000023609 ENSGALG00000023609 6933 1.409 - 0.701 - 0.708 - - - - - -
21. DNAJC12 ENSGALG00000002769 1418 0.915 - - - - - - 0.915 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
22. PKN3 532 0.912 - - - - - - 0.912 - - - protein kinase N3, transcript variant X2
23. PGAP2 ENSGALG00000027762 2583 0.905 - - - - - - 0.905 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
24. PIK3R3 ENSGALG00000010335 374 0.904 - - - - - - 0.904 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
25. ITSN1 ENSGALG00000036677 5727 0.904 - - - - - - 0.904 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
26. ERMP1 ENSGALG00000000438 1136 0.901 - - - - - - 0.901 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
27. SPG11 ENSGALG00000008180 1890 0.901 - - - - - - 0.901 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
28. SUGP1 ENSGALG00000042132 2771 0.901 - - - - - - 0.901 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
29. SCAF4 ENSGALG00000033965 2027 0.897 - - - - - - 0.897 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
30. ENSGALG00000013233 ENSGALG00000013233 3265 0.895 - - - - - - 0.895 - - -
31. GAS6 ENSGALG00000016820 481 0.895 - - - - - - 0.895 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
32. SDK2 ENSGALG00000031895 2682 0.893 - - - - - - 0.893 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
33. EP3 EP3 741 0.893 - - - - - - - - 0.893 -
34. FAM193A ENSGALG00000015667 3075 0.893 - - - - - - 0.893 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
35. NSRP1 ENSGALG00000004186 1683 0.891 - - - - - - 0.891 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
36. DNAJC16 ENSGALG00000032832 750 0.891 - - - - - - 0.891 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
37. SPAG9 ENSGALG00000034001 2314 0.891 - - - - - - 0.891 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
38. TM2D3 ENSGALG00000026271 2566 0.89 - - - - - - 0.890 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
39. UBE3B ENSGALG00000013851 1672 0.888 - - - - - - 0.888 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
40. FAM183A 242 0.888 - - - - - - 0.888 - - - family with sequence similarity 183 member A, transcript variant 2
41. ENSGALG00000016099 ENSGALG00000016099 138 0.887 - - - - - - 0.887 - - -
42. CCNL1 ENSGALG00000009699 1033 0.887 - - - - - - 0.887 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
43. MBNL2 ENSGALG00000016890 3162 0.887 - - - - - - 0.887 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
44. MORC3 ENSGALG00000036556 2976 0.886 - - - - - - 0.886 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
45. WIPI1 ENSGALG00000004215 3359 0.886 - - - - - - 0.886 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
46. SRP72 ENSGALG00000011403 13666 0.886 - - - - - - 0.886 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
47. USP54 ENSGALG00000005232 2749 0.885 - - - - - - 0.885 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
48. PTN ENSGALG00000040493 864 0.885 - - - - - - 0.885 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
49. WDSUB1 ENSGALG00000012574 2038 0.885 - - - - - - 0.885 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
50. PLCE1 ENSGALG00000039528 151 0.884 - - - - - - 0.884 - - - phospholipase C epsilon 1
51. SRPK1 ENSGALG00000037546 1849 0.884 - - - - - - 0.884 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
52. C14orf80 C14orf80 1921 0.883 - - - - - - 0.883 - - -
53. SNORA31 SNORA31 183 0.882 - - - - - - 0.882 - - -
54. LFNG ENSGALG00000038515 5178 0.882 - - - - - - 0.882 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
55. NEK4 ENSGALG00000041428 4473 0.882 - - - - - - 0.882 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
56. TM9SF4 ENSGALG00000006568 567 0.882 - - - - - - 0.882 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
57. ENTPD8L ENSGALG00000008936 731 0.882 - - - - - - 0.882 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
58. MED16 ENSGALG00000001978 2387 0.881 - - - - - - 0.881 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
59. GPN3 ENSGALG00000003807 6320 0.881 - - - - - - 0.881 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
60. MPST ENSGALG00000040840 2122 0.881 - - - - - - 0.881 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
61. LIX1 ENSGALG00000015290 7589 0.88 - - - - - 0.880 - - - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
62. UPK3BL ENSGALG00000001885 1650 0.879 - - - - - - 0.879 - - - uroplakin 3B-like
63. ZFYVE19 ENSGALG00000008460 2750 0.878 - - - - - - 0.878 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
64. ENSGALG00000003619 ENSGALG00000003619 58 0.878 - - - - - - 0.878 - - -
65. PEX6 ENSGALG00000045514 4582 0.878 - - - - - - 0.878 - - - peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
66. SLC25A21 ENSGALG00000010117 536 0.877 - - - - - - 0.877 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
67. SGSM3 ENSGALG00000012033 1839 0.877 - - - - - - 0.877 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
68. NIN ENSGALG00000012361 2284 0.876 - - - - - - 0.876 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
69. CEP290 ENSGALG00000011177 1559 0.876 - - - - - - 0.876 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
70. INTS7 ENSGALG00000009843 2395 0.875 - - - - - - 0.875 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
71. HESX1 ENSGALG00000005506 203 0.875 - - - - - - 0.875 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
72. ENSGALG00000028164 ENSGALG00000028164 3325 0.875 - - - - - - 0.875 - - -
73. ENSGALG00000026925 ENSGALG00000026925 119 0.875 - - - - - - 0.875 - - -
74. TCTE1 ENSGALG00000010165 65 0.875 - - - - - - 0.875 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
75. METTL24 ENSGALG00000041120 60 0.874 - - - - - - 0.874 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
76. MXRA5 ENSGALG00000016635 352 0.874 - - - - - - 0.874 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
77. HEMK1 ENSGALG00000002253 40 0.874 - - - - - - 0.874 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
78. GRB14 ENSGALG00000020703 42 0.874 - - - - - - 0.874 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
79. SCUBE1 ENSGALG00000014178 91 0.873 - - - - - - 0.873 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
80. DIEXF ENSGALG00000009887 4782 0.873 - - - - - - 0.873 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
81. MST1 ENSGALG00000002722 994 0.871 - - - - - - 0.871 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
82. MBNL1 ENSGALG00000029190 3953 0.871 - - - - - - 0.871 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
83. USP8 ENSGALG00000005894 4499 0.87 - - - - - - 0.870 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
84. ENSGALG00000002852 ENSGALG00000002852 2687 0.87 - - - - - - 0.870 - - -
85. COPS8 ENSGALG00000033385 10166 0.87 - - - - - - 0.870 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
86. MGLL ENSGALG00000032736 612 0.868 - - - - - - 0.868 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
87. FTSJ2 FTSJ2 2951 0.868 - - - - - - 0.868 - - -
88. BMI1 ENSGALG00000041267 6618 0.868 - - - - - - 0.868 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
89. MBTPS1 ENSGALG00000003293 4843 0.867 - - - - - - 0.867 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
90. ASB6 ENSGALG00000004378 1080 0.867 - - - - - - 0.867 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
91. RNF20 ENSGALG00000015548 7199 0.867 - - - - - - 0.867 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
92. XPO7 ENSGALG00000001838 1875 0.866 - - - - - - 0.866 - - - exportin 7 [Source:NCBI gene;Acc:426925]
93. MESDC1 1013 0.866 - - - - - - 0.866 - - - mesoderm development candidate 1
94. RBL1 ENSGALG00000001332 2568 0.865 - - - - - - 0.865 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
95. BMP4 ENSGALG00000012429 4306 0.865 - - - - - 0.865 - - - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
96. NPHP4 ENSGALG00000000966 1698 0.865 - - - - - - 0.865 - - - nephrocystin 4, transcript variant X5
97. FAM57A ENSGALG00000004820 1492 0.864 - - - - - - 0.864 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
98. SNRNP48 ENSGALG00000013005 1468 0.863 - - - - - - 0.863 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
99. RAB1A ENSGALG00000031582 6929 0.862 - - - - - - 0.862 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
100. BAMBI ENSGALG00000040993 7562 0.862 - - - - - 0.862 - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]

There are 429 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA