Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GPC1

Gene Name Gene ID Reads Annotation
GPC1 ENSGALG00000040316 13364 glypican 1 [Source:NCBI gene;Acc:424770]











Genes with expression patterns similar to GPC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GPC1 ENSGALG00000040316 13364 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glypican 1 [Source:NCBI gene;Acc:424770]
2. DHFR ENSGALG00000026757 18478 1.805 - - 0.813 - - - 0.992 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
3. FAT1 ENSGALG00000013579 6030 1.747 - - 0.749 - - - 0.998 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
4. MAEA ENSGALG00000013310 13230 1.572 - - 0.846 - - - - 0.726 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
5. URM1 ENSGALG00000004971 17880 1.559 - - 0.769 - - - - 0.790 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
6. SHMT1 ENSGALG00000005046 1430 1.534 - - 0.797 - - - - 0.737 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
7. PRKACB ENSGALG00000028530 12506 1.534 - - 0.833 - - - - 0.701 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
8. ELMOD1 ENSGALG00000017169 2303 1.527 - - 0.820 - - - - 0.707 - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
9. BLMH ENSGALG00000004259 36907 1.522 - - 0.726 - - - - 0.796 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
10. ERCC3 ENSGALG00000011515 3133 1.519 - - 0.797 - - - - 0.722 - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
11. MBSP MBSP 5634 1.499 - - 0.721 - - - - 0.778 - -
12. NUDT7 ENSGALG00000034395 7396 1.496 - - - - - - 0.749 0.747 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
13. NGFR ENSGALG00000035950 13452 1.451 - - - - - - - - 0.717 0.734 nerve growth factor receptor [Source:NCBI gene;Acc:425805]
14. TXLNA 6802 1.425 - - 0.702 - - - - 0.723 - - taxilin alpha, transcript variant X2
15. MIB1 ENSGALG00000014974 3583 1.424 - - 0.711 - - - - 0.713 - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
16. KDM6A ENSGALG00000016217 2302 1.419 - - 0.716 - - - - 0.703 - - lysine demethylase 6A, transcript variant X14
17. CNOT6 ENSGALG00000034316 10496 0.999 - - - - - - 0.999 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
18. DNAJC7 ENSGALG00000042796 14597 0.998 - - - - - - 0.998 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
19. CORO1C ENSGALG00000004901 7055 0.998 - - - - - - 0.998 - - - coronin 1C [Source:NCBI gene;Acc:416893]
20. EIF1B ENSGALG00000038646 9508 0.997 - - - - - - 0.997 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
21. VSX1 ENSGALG00000037576 1517 0.997 - - - - - - 0.997 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
22. USPL1 ENSGALG00000017079 6263 0.997 - - - - - - 0.997 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
23. ARHGAP32 ENSGALG00000043511 7916 0.997 - - - - - - 0.997 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
24. FAM192A ENSGALG00000021473 10213 0.997 - - - - - - 0.997 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
25. MCM3 ENSGALG00000016676 16934 0.997 - - - - - - 0.997 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
26. WDHD1 ENSGALG00000012199 3570 0.997 - - - - - - 0.997 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
27. LRPAP1 ENSGALG00000015612 3526 0.997 - - - - - - 0.997 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
28. C9orf64 ENSGALG00000012589 6097 0.997 - - - - - - 0.997 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
29. Sep-06 Sep-06 5961 0.997 - - - - - - 0.997 - - -
30. ZEB1 ENSGALG00000007260 9277 0.996 - - - - - - 0.996 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
31. CCNYL1 ENSGALG00000008485 11958 0.996 - - - - - - 0.996 - - - cyclin Y like 1
32. HDAC8 ENSGALG00000004825 12066 0.996 - - - - - - 0.996 - - - histone deacetylase 8, transcript variant X2
33. RNF141 ENSGALG00000029586 4962 0.996 - - - - - - 0.996 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
34. DAPK3 ENSGALG00000037733 6215 0.996 - - - - - - 0.996 - - - death-associated protein kinase 3, transcript variant X2
35. RAB12 ENSGALG00000033608 14160 0.996 - - - - - - 0.996 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
36. MCM6 ENSGALG00000012348 12523 0.995 - - - - - - 0.995 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
37. CTBPL ENSGALG00000007642 14238 0.995 - - - - - - 0.995 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
38. MATR3 ENSGALG00000002478 12793 0.995 - - - - - - 0.995 - - - matrin 3 [Source:NCBI gene;Acc:373948]
39. C15H12ORF49 C15H12ORF49 13250 0.993 - - - - - - 0.993 - - -
40. EIF3D ENSGALG00000012529 40887 0.993 - - - - - - 0.993 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
41. CXCL12 ENSGALG00000041346 4128 0.993 - - - - - - 0.993 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
42. EFTUD2 ENSGALG00000000988 17913 0.993 - - - - - - 0.993 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
43. TMEM18 ENSGALG00000028744 11779 0.991 - - - - - - 0.991 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
44. SLC9A3R1 ENSGALG00000007650 13053 0.991 - - - - - - 0.991 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
45. RAP1B ENSGALG00000009927 26562 0.991 - - - - - - 0.991 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
46. UBE2L3 ENSGALG00000036739 21401 0.989 - - - - - - 0.989 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
47. IFT20 ENSGALG00000005707 23973 0.989 - - - - - - 0.989 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
48. INTS4 ENSGALG00000000091 5965 0.988 - - - - - - 0.988 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
49. CDCA4 ENSGALG00000011692 10381 0.986 - - - - - - 0.986 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
50. LRPPRC ENSGALG00000009967 17091 0.984 - - - - - - 0.984 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
51. HNRNPH3 ENSGALG00000003947 28724 0.984 - - - - - - 0.984 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
52. PDLIM4 ENSGALG00000039872 7823 0.983 - - - - - - 0.983 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
53. PPIG ENSGALG00000009839 24114 0.982 - - - - - - 0.982 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
54. ZNF644 ENSGALG00000034253 28348 0.981 - - - - - - 0.981 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
55. SMARCE1 ENSGALG00000003882 49063 0.974 - - - - - - 0.974 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
56. HNRNPM ENSGALG00000000377 40684 0.956 - - - - - - 0.956 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
57. CBLL1 ENSGALG00000038981 6725 0.886 - - 0.886 - - - - - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
58. TMCC2 ENSGALG00000034281 3458 0.879 - - - - - - - 0.879 - - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
59. SETD1B ENSGALG00000004324 2897 0.856 - - 0.856 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
60. NFI1 NFI1 6210 0.845 - - 0.845 - - - - - - -
61. KLHL21 ENSGALG00000035211 6145 0.84 - - - - - - - 0.840 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
62. ENSGALG00000004283 ENSGALG00000004283 4771 0.837 - - - - - - - 0.837 - -
63. HNRNPLL ENSGALG00000008504 14719 0.836 - - 0.836 - - - - - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
64. RALGAPA2 240 0.836 - - 0.836 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
65. SENP6 ENSGALG00000015901 8013 0.836 - - 0.836 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
66. ARRDC4 ENSGALG00000007012 1039 0.835 - - 0.835 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
67. PSMD13 ENSGALG00000043684 14720 0.834 - - - - - - - 0.834 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
68. BMS1 ENSGALG00000002624 8339 0.834 - - 0.834 - - - - - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
69. MAN2B2 ENSGALG00000015537 2267 0.834 - - 0.834 - - - - - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
70. ESRP2 ENSGALG00000003374 4436 0.833 - - 0.833 - - - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
71. ELOVL5 ENSGALG00000016314 18163 0.83 - - 0.830 - - - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
72. AKT3 ENSGALG00000034081 866 0.83 - - 0.830 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
73. RBPMS_1 ENSGALG00000010291 16146 0.828 - - - - - - - 0.828 - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
74. ATF7IP ENSGALG00000011814 1571 0.828 - - 0.828 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
75. CUL5 ENSGALG00000017165 2480 0.824 - - 0.824 - - - - - - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
76. SOBP ENSGALG00000043047 147 0.823 - - 0.823 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
77. THOC3 ENSGALG00000024172 7617 0.822 - - - - - - - 0.822 - - THO complex 3 [Source:NCBI gene;Acc:416232]
78. ATP10D ENSGALG00000014192 94 0.821 - - 0.821 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
79. RIT1 ENSGALG00000014647 7174 0.819 - - - - - - - 0.819 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
80. IQCD ENSGALG00000037307 642 0.819 - - 0.819 - - - - - - - IQ motif containing D, transcript variant X2
81. LUM ENSGALG00000011271 44020 0.819 - - - - - - 0.819 - - - lumican [Source:NCBI gene;Acc:417891]
82. LBR 6686 0.818 - - 0.818 - - - - - - - lamin B receptor, transcript variant X4
83. PRTG ENSGALG00000037336 34665 0.818 - - 0.818 - - - - - - - protogenin [Source:NCBI gene;Acc:415407]
84. PCBP4 ENSGALG00000027695 7937 0.818 - - - - - - - 0.818 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
85. WTAP ENSGALG00000011660 10811 0.818 - - 0.818 - - - - - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
86. TMEM242 ENSGALG00000013689 377 0.817 - - 0.817 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
87. KCTD10 ENSGALG00000005138 1191 0.814 - - 0.814 - - - - - - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
88. ADIPOR2 ENSGALG00000035533 6523 0.814 - - 0.814 - - - - - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
89. CENPK ENSGALG00000014753 12414 0.814 - - - - - - - 0.814 - - centromere protein K [Source:NCBI gene;Acc:427162]
90. TRIT1 ENSGALG00000003851 1518 0.813 - - 0.813 - - - - - - - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
91. RAD18 ENSGALG00000008368 7214 0.813 - - 0.813 - - - - - - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
92. PIGK ENSGALG00000009015 7942 0.813 - - 0.813 - - - - - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
93. STXBP6 ENSGALG00000009847 224 0.812 - - 0.812 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
94. SMC4 ENSGALG00000009553 15715 0.812 - - 0.812 - - - - - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
95. PTCD3 ENSGALG00000015773 3059 0.812 - - 0.812 - - - - - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
96. REST 2394 0.812 - - 0.812 - - - - - - - RE1 silencing transcription factor
97. RBM25 ENSGALG00000009332 10842 0.81 - - 0.810 - - - - - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
98. FAM171B ENSGALG00000002646 837 0.81 - - 0.810 - - - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
99. MAPRE3 ENSGALG00000031726 191 0.81 - - 0.810 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
100. SUB1 ENSGALG00000003248 56412 0.81 - - - - - - 0.810 - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]

There are 495 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA