Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GPBP1

Gene Name Gene ID Reads Annotation
GPBP1 ENSGALG00000014724 5454 GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]











Genes with expression patterns similar to GPBP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GPBP1 ENSGALG00000014724 5454 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]
2. VBP1 VBP1 14482 1.556 - - - - - - 0.778 0.778 - -
3. TBC1D19 ENSGALG00000029673 1868 1.538 - - - - - - - 0.729 - 0.809 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
4. USP10 ENSGALG00000005674 7768 1.532 - - - - - - 0.761 - - 0.771 ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
5. TBL1XR1 ENSGALG00000039182 16983 1.532 - - - - - - 0.739 0.793 - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
6. RPF2 ENSGALG00000037087 12788 1.526 - - - - - - 0.769 - - 0.757 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
7. ASAP2 ENSGALG00000016419 1393 1.507 - - - - - - - 0.729 - 0.778 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
8. SMC4 ENSGALG00000009553 15715 1.506 - - - - - - 0.748 - - 0.758 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
9. LY6E ENSGALG00000041621 16227 1.503 - - - - - - 0.708 - - 0.795 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
10. PNPT1 ENSGALG00000043545 1306 1.497 - - - - - - - 0.729 - 0.768 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
11. DSCC1 ENSGALG00000043799 2436 1.483 - - - - - 0.719 0.764 - - - DNA replication and sister chromatid cohesion 1 [Source:HGNC Symbol;Acc:HGNC:24453]
12. IDS ENSGALG00000009154 1177 1.474 - - - - - - - 0.713 - 0.761 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
13. SNRNP48 ENSGALG00000013005 1468 1.465 - - - - - 0.718 - - - 0.747 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
14. MRPL50 ENSGALG00000015543 11649 1.462 - - - - - - 0.713 - - 0.749 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
15. CUL5 ENSGALG00000017165 2480 1.462 - - - - - - 0.714 - - 0.748 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
16. SRBD1 ENSGALG00000009990 4568 1.46 - - - - - 0.753 0.707 - - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
17. STRADA ENSGALG00000000550 6912 1.455 - - - - - - 0.737 - - 0.718 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
18. POLR2B ENSGALG00000011387 4864 1.45 - - - - - - 0.711 - - 0.739 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
19. C7H2ORF76 ENSGALG00000012113 1947 1.45 - - - - - - 0.720 0.730 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
20. TRAPPC12 ENSGALG00000016387 2593 1.444 - - - - - - - 0.714 - 0.730 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
21. RBMX ENSGALG00000006457 34009 1.439 - - - - - 0.707 0.732 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
22. NEO1 ENSGALG00000001774 10165 1.432 - - - - - - 0.730 - - 0.702 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
23. CCNI ENSGALG00000011457 3203 1.43 - - - - - - - 0.725 - 0.705 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
24. GTSE1 ENSGALG00000004897 2865 1.425 - - - - - - - 0.720 - 0.705 G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
25. POLR1E ENSGALG00000005395 8953 1.411 - - - - - - 0.702 0.709 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
26. SON ENSGALG00000035096 8654 0.966 - - - - - - - 0.966 - - SON DNA binding protein, transcript variant X4
27. TXNDC9 ENSGALG00000032090 6804 0.94 - - - - - - - 0.940 - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
28. PIN4 ENSGALG00000003878 23523 0.9 - - - - - - - 0.900 - - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 [Source:HGNC Symbol;Acc:HGNC:8992]
29. NUP43 ENSGALG00000012387 11779 0.891 - - - - - - - 0.891 - - nucleoporin 43 [Source:HGNC Symbol;Acc:HGNC:21182]
30. DCTN3 ENSGALG00000021365 22839 0.853 - - - - - - - 0.853 - - dynactin subunit 3 [Source:NCBI gene;Acc:427404]
31. ATG5 ENSGALG00000015387 7752 0.851 - - - - - - - 0.851 - - autophagy related 5 [Source:NCBI gene;Acc:421784]
32. AP5Z1 ENSGALG00000040528 4302 0.846 - - - - - - 0.846 - - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
33. SPON1 ENSGALG00000038775 16503 0.845 - - - - - - - 0.845 - - spondin 1 [Source:NCBI gene;Acc:395657]
34. SLC35B1 ENSGALG00000035057 10683 0.842 - - - - - - - - - 0.842 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
35. RHOT1 ENSGALG00000003397 5149 0.838 - - - - - - - - - 0.838 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
36. LOC770492 ENSGALG00000027778 695 0.837 - - - - - - - - - 0.837 ras-related and estrogen-regulated growth inhibitor-like
37. B3GALTL B3GALTL 4128 0.836 - - - - - - - - - 0.836
38. MFSD1 ENSGALG00000009593 3116 0.834 - - - - - - - - - 0.834 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
39. KIDINS220 ENSGALG00000016409 854 0.833 - - - - - - - - - 0.833 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
40. CNOT10 ENSGALG00000011494 2614 0.832 - - - - - - - 0.832 - - CCR4-NOT transcription complex subunit 10 [Source:NCBI gene;Acc:420669]
41. GID8 ENSGALG00000005700 3992 0.832 - - - - - - - - - 0.832 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
42. VWA9 ENSGALG00000007491 4790 0.831 - - - - - - - - - 0.831 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
43. GPN2 ENSGALG00000027909 5204 0.83 - - - - - - - - - 0.830 GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:HGNC:25513]
44. SPATA20 ENSGALG00000006857 3506 0.83 - - - - - - - - - 0.830 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
45. WRNIP1 ENSGALG00000012856 1954 0.827 - - - - - - - - - 0.827 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
46. CASP8AP2 ENSGALG00000015611 5657 0.826 - - - - - - - - - 0.826 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
47. PARP1 ENSGALG00000009228 39433 0.824 - - - - - - 0.824 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
48. AIMP2 ENSGALG00000003400 12655 0.818 - - - - - - 0.818 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
49. C1orf198 ENSGALG00000026600 5651 0.818 - - - - - - - - - 0.818 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
50. HNRNPD ENSGALG00000011184 10686 0.818 - - - - - - - - - 0.818 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
51. F2RL2 ENSGALG00000023379 1049 0.817 - - - - - - - - - 0.817 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
52. COX17 ENSGALG00000014981 5646 0.816 - - - - - - - - - 0.816 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
53. SLC2A3 SLC2A3 527 0.814 - - - - - - - - - 0.814
54. THOP1 ENSGALG00000041934 10122 0.814 - - - - - - 0.814 - - - thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:11793]
55. BRT-1 BRT-1 26083 0.813 - - - - - - - - - 0.813
56. SSR2 ENSGALG00000000764 32190 0.811 - - - - - - - - - 0.811 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
57. C9orf89 C9orf89 3056 0.81 - - - - - - - - - 0.810
58. MYO5A ENSGALG00000031987 2469 0.81 - - - - - - - - - 0.810 myosin VA [Source:NCBI gene;Acc:396237]
59. HSD17B12 ENSGALG00000036787 11748 0.81 - - - - - - - - - 0.810 hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
60. ARID1B ENSGALG00000013683 3397 0.809 - - - - - - - - - 0.809 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
61. MGA 1911 0.809 - - - - - - - - - 0.809 MGA, MAX dimerization protein, transcript variant X15
62. CCDC66 ENSGALG00000005450 1262 0.805 - - - - - - - - - 0.805 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
63. AP1G1 12403 0.805 - - - - - - - - - 0.805 adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
64. RER1 ENSGALG00000021683 9074 0.801 - - - - - - - - - 0.801 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
65. CPNE1 ENSGALG00000040856 610 0.799 - - - - - - - - - 0.799 copine 1 [Source:NCBI gene;Acc:419134]
66. CETN1 ENSGALG00000026741 7243 0.799 - - - - - - - - - 0.799 centrin 1 [Source:NCBI gene;Acc:422668]
67. WIPI2 ENSGALG00000004557 4961 0.797 - - - - - - 0.797 - - - WD repeat domain, phosphoinositide interacting 2 [Source:NCBI gene;Acc:416481]
68. AURKA ENSGALG00000007768 793 0.797 - - - - - - - - - 0.797 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
69. TCF25 ENSGALG00000000129 7587 0.797 - - - - - - - - - 0.797 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
70. CNTRL ENSGALG00000001513 1773 0.797 - - - - - - - - - 0.797 centriolin [Source:NCBI gene;Acc:417121]
71. KIAA1551 ENSGALG00000045168 3435 0.797 - - - - - - - - - 0.797 KIAA1551, transcript variant X1
72. ATP6V0C ENSGALG00000009229 125870 0.796 - - - - - - - - - 0.796 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
73. COG5 ENSGALG00000042764 4205 0.796 - - - - - - - - - 0.796 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
74. PSPC1 ENSGALG00000017142 13036 0.796 - - - - - - 0.796 - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
75. METAP2 ENSGALG00000011377 16311 0.796 - - - - - - 0.796 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
76. SOX6 ENSGALG00000006074 102 0.796 - - - - - - - - - 0.796 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
77. PTX3 ENSGALG00000028284 2984 0.795 - - - - - - - - - 0.795 pentraxin 3 [Source:NCBI gene;Acc:548626]
78. SUV39H2 ENSGALG00000013920 4360 0.795 - - - - - - - - - 0.795 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
79. ZNF6 ZNF6 138 0.795 - - - - - - - - - 0.795
80. CCT8 ENSGALG00000015821 12161 0.794 - - - - - - - - - 0.794 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
81. PREX2 ENSGALG00000042354 134 0.794 - - - - - - - - - 0.794 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
82. ENSGALG00000005389 ENSGALG00000005389 553 0.794 - - - - - - - - - 0.794
83. WHSC1 1712 0.794 - - - - - - - - - 0.794 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
84. TANGO2 ENSGALG00000002056 1971 0.793 - - - - - - - - - 0.793 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
85. GRTP1 ENSGALG00000016828 3145 0.793 - - - - - - - - - 0.793 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
86. IL10R2 IL10R2 72 0.793 - - - - - - - - - 0.793
87. CXADR ENSGALG00000015701 96 0.792 - - - - - - - - - 0.792 coxsackie virus and adenovirus receptor, transcript variant X2
88. CRYM ENSGALG00000002484 3558 0.792 - - - - - - - - - 0.792 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
89. CPNE2 ENSGALG00000001316 236 0.792 - - - - - - - - - 0.792 copine 2 [Source:NCBI gene;Acc:415646]
90. TP53BP1 ENSGALG00000042201 708 0.792 - - - - - - - - - 0.792 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
91. ZBTB16 ENSGALG00000038540 5544 0.791 - - - - - - 0.791 - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
92. FAM190B FAM190B 165 0.791 - - - - - - - - - 0.791
93. SSH1 ENSGALG00000004928 222 0.791 - - - - - - - - - 0.791 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
94. 5S_2 5S_2 58 0.79 - - - - - - - - - 0.790
95. HSPA12A ENSGALG00000009248 7783 0.79 - - - - - - - - - 0.790 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
96. LLPH ENSGALG00000019358 20976 0.79 - - - - - - 0.790 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
97. NDUFA12 ENSGALG00000011325 19807 0.789 - - - - - - 0.789 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
98. ITSN2 ENSGALG00000016504 651 0.789 - - - - - - - - - 0.789 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
99. NDUFAF1 ENSGALG00000008587 14779 0.789 - - - - - - - - - 0.789 NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
100. PROM1 ENSGALG00000014496 2494 0.789 - - - - - - - - - 0.789 prominin 1 [Source:NCBI gene;Acc:422825]

There are 604 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA