Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GPATCH3

Gene Name Gene ID Reads Annotation
GPATCH3 ENSGALG00000000881 113 G-patch domain containing 3 [Source:NCBI gene;Acc:419577]











Genes with expression patterns similar to GPATCH3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GPATCH3 ENSGALG00000000881 113 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 G-patch domain containing 3 [Source:NCBI gene;Acc:419577]
2. SHC1 ENSGALG00000039775 219 0.882 - - - - - - 0.882 - - - SHC adaptor protein 1 [Source:NCBI gene;Acc:395934]
3. PTK2B ENSGALG00000016564 406 0.83 - - 0.830 - - - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
4. HOMER1 ENSGALG00000014813 19 0.807 - - 0.807 - - - - - - - homer scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:17512]
5. AGBL5 ENSGALG00000038639 25 0.796 - - - - - - 0.796 - - - ATP/GTP binding protein like 5 [Source:HGNC Symbol;Acc:HGNC:26147]
6. IPPK ENSGALG00000004684 39 0.793 - - 0.793 - - - - - - - inositol-pentakisphosphate 2-kinase [Source:NCBI gene;Acc:415951]
7. COLEC10 ENSGALG00000033144 3436 0.775 - - - - 0.775 - - - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
8. ZBTB41 ENSGALG00000002305 97 0.773 - - 0.773 - - - - - - - zinc finger and BTB domain containing 41, transcript variant X2
9. ENSGALG00000012217 ENSGALG00000012217 8 0.765 - - - - - - 0.765 - - -
10. EDRF1 26 0.765 - - 0.765 - - - - - - - erythroid differentiation regulatory factor 1
11. SYNJ2BP ENSGALG00000009387, ENSGALG00000035537 124 0.763 - - 0.763 - - - - - - - synaptojanin 2 binding protein, transcript variant X2
12. ENSGALG00000002367 ENSGALG00000002367 10 0.761 - - 0.761 - - - - - - -
13. STAR ENSGALG00000003242 4 0.761 - - 0.761 - - - - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
14. LYG2 ENSGALG00000016761 7 0.761 - - 0.761 - - - - - - - lysozyme g2 [Source:NCBI gene;Acc:395708]
15. ENSGALG00000021824 ENSGALG00000021824 6 0.761 - - 0.761 - - - - - - -
16. NEIL2 ENSGALG00000016664 4 0.761 - - 0.761 - - - - - - - nei like DNA glycosylase 2 [Source:NCBI gene;Acc:422037]
17. NFATC2 ENSGALG00000007963 15 0.761 - - 0.761 - - - - - - - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
18. CDH6 ENSGALG00000012917 17 0.761 - - 0.761 - - - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
19. ENSGALG00000013079 ENSGALG00000013079 12 0.761 - - 0.761 - - - - - - -
20. SH3TC2 2 0.761 - - 0.761 - - - - - - - SH3 domain and tetratricopeptide repeats 2
21. TP63 ENSGALG00000007324 6 0.761 - - 0.761 - - - - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
22. ENSGALG00000010590 ENSGALG00000010590 6 0.761 - - 0.761 - - - - - - -
23. LMBR1 ENSGALG00000030379 29 0.76 - - 0.760 - - - - - - - limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
24. EIF2B5 ENSGALG00000008376 36 0.759 - - - - 0.759 - - - - - eukaryotic translation initiation factor 2B subunit epsilon [Source:HGNC Symbol;Acc:HGNC:3261]
25. ARHGEF37 ENSGALG00000039652 28 0.757 - - 0.757 - - - - - - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
26. PPP1R13B ENSGALG00000011548 88 0.757 - - 0.757 - - - - - - - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
27. FASTKD1 ENSGALG00000009841 45 0.753 - - 0.753 - - - - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
28. AFG3L2 ENSGALG00000013853 1138 0.752 - - - - - - - 0.752 - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
29. TNFRSF19 ENSGALG00000017119 25 0.75 - - 0.750 - - - - - - - TNF receptor superfamily member 19 [Source:NCBI gene;Acc:418943]
30. PTPRN ENSGALG00000033811 454 0.748 - - - - - - - 0.748 - - protein tyrosine phosphatase, receptor type N [Source:HGNC Symbol;Acc:HGNC:9676]
31. TLR3 ENSGALG00000013468 35 0.745 - - - - - - 0.745 - - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
32. LITAF ENSGALG00000003217 7 0.745 - - - - - - 0.745 - - - lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
33. OSBPL6 ENSGALG00000009172 96 0.743 - - 0.743 - - - - - - - oxysterol binding protein like 6 [Source:HGNC Symbol;Acc:HGNC:16388]
34. SLC22A16 ENSGALG00000015055 21 0.74 - - 0.740 - - - - - - - solute carrier family 22 member 16 [Source:HGNC Symbol;Acc:HGNC:20302]
35. TMEM248 ENSGALG00000033954 248 0.738 - - 0.738 - - - - - - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
36. gga-mir-6569 ENSGALG00000026551 10 0.734 - - 0.734 - - - - - - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
37. ZDHHC3 ENSGALG00000029266 11 0.733 - - 0.733 - - - - - - - zinc finger DHHC-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18470]
38. APOB ENSGALG00000016491 34 0.733 - - 0.733 - - - - - - - apolipoprotein B [Source:NCBI gene;Acc:396535]
39. PRPF19 ENSGALG00000040048 168 0.729 - - 0.729 - - - - - - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
40. FTO ENSGALG00000041036 11 0.727 - - 0.727 - - - - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
41. GRB10 ENSGALG00000013100 37 0.722 - - - - - 0.722 - - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
42. CLDN20 ENSGALG00000027634 25 0.721 - - 0.721 - - - - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
43. TUBGCP5 ENSGALG00000016735 279 0.72 - - - - - - 0.720 - - - tubulin gamma complex associated protein 5 [Source:HGNC Symbol;Acc:HGNC:18600]
44. MMEL1 ENSGALG00000001115 46 0.714 - - 0.714 - - - - - - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
45. PDSS1 ENSGALG00000007559 432 0.714 - - - - - - - 0.714 - - Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 1 (PDSS1), mRNA. [Source:RefSeq mRNA;Acc:NM_001321600]
46. SHC4 245 0.714 - - - - - - - 0.714 - - SHC adaptor protein 4, transcript variant X1
47. ENSGALG00000017013 ENSGALG00000017013 286 0.708 - - - - - - - 0.708 - -
48. ARFGEF2 ENSGALG00000004663 98 0.706 - - - - - - 0.706 - - - ADP ribosylation factor guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:15853]
49. RHOF ENSGALG00000039724 8 0.701 - - 0.701 - - - - - - - ras homolog family member F, filopodia associated [Source:NCBI gene;Acc:416848]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA