Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GMDS

Gene Name Gene ID Reads Annotation
GMDS 284 GDP-mannose 4,6-dehydratase, transcript variant X3











Genes with expression patterns similar to GMDS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GMDS 284 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 GDP-mannose 4,6-dehydratase, transcript variant X3
2. LRRC31 ENSGALG00000023616 55 0.926 - - - - - - - - - 0.926 leucine rich repeat containing 31 [Source:HGNC Symbol;Acc:HGNC:26261]
3. ENSGALG00000028367 ENSGALG00000028367 102 0.913 - - - - - - - - - 0.913
4. ARHGAP39 ENSGALG00000001536 15 0.913 - - - - - - - - - 0.913 Rho GTPase activating protein 39, transcript variant X2
5. PGR ENSGALG00000017195 2 0.91 - - - - - - - - - 0.910 progesterone receptor [Source:NCBI gene;Acc:396198]
6. SLC26A5 ENSGALG00000008222 3 0.91 - - - - - - - - - 0.910 solute carrier family 26 member 5 [Source:NCBI gene;Acc:417715]
7. ENSGALG00000010883 ENSGALG00000010883 10 0.91 - - - - - - - - - 0.910
8. ENSGALG00000021386 ENSGALG00000021386 29 0.91 - - - - - - - - - 0.910
9. ENSGALG00000013409 ENSGALG00000013409 4 0.91 - - - - - - - - - 0.910
10. UGT2A1 ENSGALG00000011805 2 0.91 - - - - - - - - - 0.910 UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus, transcript variant X3
11. FOLH1 ENSGALG00000017234 9 0.91 - - - - - - - - - 0.910 folate hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3788]
12. ENSGALG00000023012 ENSGALG00000023012 2 0.91 - - - - - - - - - 0.910
13. CNTNAP5 ENSGALG00000011577 2 0.91 - - - - - - - - - 0.910 contactin associated protein like 5 [Source:NCBI gene;Acc:424231]
14. SLC22A15 ENSGALG00000015016 12 0.91 - - - - - - - - - 0.910 solute carrier family 22 member 15 [Source:HGNC Symbol;Acc:HGNC:20301]
15. ATXN1 ENSGALG00000012709 2 0.91 - - - - - - - - - 0.910 ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]
16. gga-mir-1556 ENSGALG00000025512 2 0.91 - - - - - - - - - 0.910 gga-mir-1556 [Source:miRBase;Acc:MI0007281]
17. C1orf116 ENSGALG00000001091 34 0.907 - - - - - - - - - 0.907 chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
18. ENSGALG00000008822 ENSGALG00000008822 221 0.905 - - - - - - - - - 0.905
19. ENSGALG00000027568 ENSGALG00000027568 3 0.902 - - - - - - - - - 0.902
20. IRF8 ENSGALG00000005757 5 0.902 - - - - - - - - - 0.902 interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
21. CXCL13L2 ENSGALG00000010338 370 0.898 - - - - - - - - - 0.898 C-X-C motif chemokine ligand 13-like 2 [Source:NCBI gene;Acc:422510]
22. PALM2 ENSGALG00000015655 20 0.896 - - - - - - - - - 0.896 paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
23. USP31 ENSGALG00000006286 28 0.895 - - - - - - - - - 0.895 ubiquitin specific peptidase 31 [Source:HGNC Symbol;Acc:HGNC:20060]
24. IYD ENSGALG00000012392 315 0.892 - - - - - - - - - 0.892 iodotyrosine deiodinase [Source:HGNC Symbol;Acc:HGNC:21071]
25. DPY19L4 ENSGALG00000039222 30 0.886 - - - - - - - - - 0.886 dpy-19 like 4 [Source:HGNC Symbol;Acc:HGNC:27829]
26. CCPG1 ENSGALG00000004387 205 0.885 - - - - - - - - - 0.885 dyslexia susceptibility 1 candidate 1 [Source:NCBI gene;Acc:415409]
27. PDE8B ENSGALG00000004339 2 0.884 - - - - - - - - - 0.884 phosphodiesterase 8B, transcript variant X3
28. PLXND1 ENSGALG00000008473 21 0.88 - - - - - - - - - 0.880 plexin D1 [Source:HGNC Symbol;Acc:HGNC:9107]
29. OSBPL10 45 0.873 - - - - - - - - - 0.873 oxysterol binding protein like 10
30. COL11A1 ENSGALG00000005180 244 0.862 - - - - - - - - - 0.862 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
31. ARHGAP26 ENSGALG00000033938 31 0.86 - - - - - - - - - 0.860 Rho GTPase activating protein 26 [Source:NCBI gene;Acc:396113]
32. LAPTM5 ENSGALG00000038636 18 0.857 - - - - - - - - - 0.857 lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
33. ZSWIM6 ENSGALG00000014734 7 0.855 - - - - - - - - - 0.855 zinc finger SWIM-type containing 6, transcript variant X2
34. KCNJ15 ENSGALG00000016055 66 0.854 - - - - - - - - - 0.854 potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
35. RAB3GAP2 ENSGALG00000009503 36 0.852 - - - - - - - - - 0.852 RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
36. SLC29A4 ENSGALG00000010497 43 0.848 - - - - - - - - - 0.848 solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
37. CLDN20 ENSGALG00000027634 25 0.847 - - - - - - - - - 0.847 claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
38. MOV10 ENSGALG00000001558 244 0.847 - - - - - - - - - 0.847 Mov10 RISC complex RNA helicase [Source:NCBI gene;Acc:419872]
39. TRPC3 ENSGALG00000011875 9 0.843 - - - - - - - - - 0.843 transient receptor potential cation channel subfamily C member 3 [Source:NCBI gene;Acc:374153]
40. S100A9 ENSGALG00000024272 103 0.839 - - - - - - - - - 0.839 S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
41. SAMD3 ENSGALG00000032409 459 0.838 - - - - - - - - - 0.838 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
42. FHOD3 ENSGALG00000013124 195 0.835 - - - - - - - - - 0.835 formin homology 2 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26178]
43. GPR61 ENSGALG00000040168 70 0.833 - - - - - - - - - 0.833 G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
44. ITGA4 ENSGALG00000041577 109 0.831 - - - - - - - - - 0.831 integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]
45. ADAMTSL3 ENSGALG00000006104 57 0.824 - - - - - - - - - 0.824 ADAMTS like 3 [Source:HGNC Symbol;Acc:HGNC:14633]
46. OSF-2 OSF-2 10433 0.821 - - - - - - - - - 0.821
47. DCLK1 ENSGALG00000041263 40 0.816 - - - - - - - - - 0.816 doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
48. DCP1A 22 0.811 - - - - - - - - - 0.811 decapping mRNA 1A, transcript variant X3
49. DCLRE1B ENSGALG00000028626 48 0.811 - - - - - - - - - 0.811 DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
50. BLK ENSGALG00000016661 68 0.81 - - - - - - - - - 0.810 BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
51. PTPRD ENSGALG00000015058 37 0.808 - - - - - - - - - 0.808 protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
52. ENSGALG00000011799 ENSGALG00000011799 37 0.805 - - - - - - - - - 0.805
53. MAP3K2 42 0.802 - - - - - - - - - 0.802 mitogen-activated protein kinase kinase kinase 2, transcript variant X3
54. SHROOM3 35 0.798 - - - - - - - - - 0.798 shroom family member 3, transcript variant X1
55. AMOTL1 ENSGALG00000017208 5 0.797 - - - - - - - - - 0.797 angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
56. RIMBP2 ENSGALG00000002579 10 0.797 - - - - - - - - - 0.797 RIMS binding protein 2 [Source:NCBI gene;Acc:374105]
57. GPR85 ENSGALG00000009439 23 0.796 - - - - - - - - - 0.796 G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
58. SAMD15 ENSGALG00000010457 69 0.794 - - - - - - - - - 0.794 sterile alpha motif domain containing 15
59. RFX7 ENSGALG00000041896 69 0.788 - - - - - - - - - 0.788 regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
60. BCMO1 BCMO1 35 0.784 - - - - - - - - - 0.784
61. AFF1 ENSGALG00000043935 34 0.783 - - - - - - - - - 0.783 AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
62. UGT8L ENSGALG00000005599 93 0.783 - - - - - - - - - 0.783 UDP glycosyltransferase 8-like
63. ZHX2 ENSGALG00000043827 13 0.782 - - - - - - - - - 0.782 zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:HGNC:18513]
64. RREB1 ENSGALG00000012799 125 0.779 - - - - - - - - - 0.779 ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
65. VWA3A 6 0.778 - - - - - - - - - 0.778 von Willebrand factor A domain containing 3A, transcript variant X4
66. LEPRE1 LEPRE1 156 0.778 - - - - - - - - - 0.778
67. HECTD2 ENSGALG00000038043 177 0.776 - - - - - - - - - 0.776 HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
68. ENSGALG00000007080 ENSGALG00000007080 20 0.774 - - - - - - - - - 0.774
69. ENSGALG00000025953 ENSGALG00000025953 65 0.774 - - - - - - - - - 0.774
70. STXBP5 ENSGALG00000012336 20 0.771 - - - - - - - - - 0.771 syntaxin binding protein 5 [Source:HGNC Symbol;Acc:HGNC:19665]
71. AGO1 ENSGALG00000002249 125 0.771 - - - - - - 0.771 - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
72. CCDC157 ENSGALG00000007907 10 0.767 - - - - - - - - - 0.767 coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
73. BAFF BAFF 40 0.765 - - - - - - - - - 0.765
74. SH3GL1 ENSGALG00000001121 159 0.761 - - - - - 0.761 - - - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
75. KIAA0232 ENSGALG00000015538 717 0.757 - - - - - - - - - 0.757 KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
76. SERPINC1 ENSGALG00000004591 68 0.757 - - - - - - 0.757 - - - Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
77. RBM46 ENSGALG00000009278 98 0.756 - - - - - - - - - 0.756 RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
78. MATN4 ENSGALG00000004028 15 0.756 - - - - - - - - - 0.756 matrilin 4 [Source:HGNC Symbol;Acc:HGNC:6910]
79. ENSGALG00000028652 ENSGALG00000028652 65 0.754 - - - - - - - - - 0.754
80. ENSGALG00000005433 ENSGALG00000005433 55 0.754 - - - - - - - - - 0.754
81. RGS20 ENSGALG00000025941 108 0.753 - - - - - - 0.753 - - - regulator of G protein signaling 20 [Source:NCBI gene;Acc:395646]
82. NTRK2 ENSGALG00000012594 24 0.752 - - - - - - - - - 0.752 neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
83. WDR24 ENSGALG00000002450 81 0.75 - - - - - - - - - 0.750 WD repeat domain 24 [Source:NCBI gene;Acc:416406]
84. RALGAPA2 240 0.75 - - - - - - - - - 0.750 Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
85. GPR97 GPR97 16 0.749 - - - 0.749 - - - - - -
86. SOCS1 ENSGALG00000007158 14 0.748 - - - - - - - - - 0.748 suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]
87. RAB38 ENSGALG00000028018 1046 0.747 - - - - - - - - - 0.747 RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
88. GPRC5B ENSGALG00000002028 28 0.747 - - - - - - - - - 0.747 G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
89. ARHGEF5 ENSGALG00000017276 32 0.745 - - - - - - - - - 0.745 Rho guanine nucleotide exchange factor 5, transcript variant X5
90. RHOBTB1 ENSGALG00000003073 56 0.743 - - - - - - 0.743 - - - Rho related BTB domain containing 1 [Source:NCBI gene;Acc:423664]
91. SYNPO2L ENSGALG00000005207 60 0.742 - - - - - - - - - 0.742 synaptopodin 2 like [Source:HGNC Symbol;Acc:HGNC:23532]
92. TMEM230 ENSGALG00000036876 55 0.74 - - - - - - - - - 0.740 transmembrane protein 230 [Source:NCBI gene;Acc:419518]
93. LRRTM1 ENSGALG00000015967 85 0.739 - - - - - - - - - 0.739 leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
94. H2B-I H2B-I 13 0.739 - - - - - - - - - 0.739
95. ENSGALG00000013164 ENSGALG00000013164 3 0.734 - - - - - 0.734 - - - -
96. ENSGALG00000019053 ENSGALG00000019053 8 0.733 - - - - - - - - - 0.733
97. SPEF2 ENSGALG00000023552 23 0.731 - - - - - - - - - 0.731 sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
98. HSF3 ENSGALG00000040662 140 0.728 - - - - - - - - - 0.728 Heat shock factor protein 3 [Source:NCBI gene;Acc:422169]
99. INSIG1 ENSGALG00000017394 693 0.728 - - - - - - - - - 0.728 insulin induced gene 1 [Source:NCBI gene;Acc:420442]
100. CAMK1G ENSGALG00000001319 58 0.726 - - - - - - - - - 0.726 calcium/calmodulin dependent protein kinase IG [Source:HGNC Symbol;Acc:HGNC:14585]

There are 16 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA