Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GLI3

Gene Name Gene ID Reads Annotation
GLI3 ENSGALG00000040266 9981 GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]











Genes with expression patterns similar to GLI3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GLI3 ENSGALG00000040266 9981 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
2. DDX27 ENSGALG00000006974 18388 1.547 - - - - - - 0.707 0.840 - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
3. CASK ENSGALG00000042400 8485 1.545 - - - - - - 0.828 0.717 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
4. CMPK CMPK 9569 1.542 - - - - - - 0.821 0.721 - -
5. PPP2R5D ENSGALG00000040005 6804 1.492 - - - - - - 0.778 0.714 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
6. UBE2B ENSGALG00000032664 6069 1.487 - - - - - - 0.759 0.728 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
7. EHMT1 ENSGALG00000033678 5720 1.48 - - - - - - 0.737 0.743 - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
8. NEK1 ENSGALG00000009683 4305 1.467 - - - - - - 0.714 0.753 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
9. PES1 ENSGALG00000007778 12248 1.462 - - - - - - 0.723 0.739 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
10. DEK ENSGALG00000012684 14179 1.427 - - - - - - 0.713 0.714 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
11. DNAJC3 ENSGALG00000016894 9048 0.883 - - - - - - 0.883 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
12. RABGGTB ENSGALG00000011388 11654 0.878 - - - - - - 0.878 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
13. BIRC6 ENSGALG00000010541 7999 0.878 - - - - - - 0.878 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
14. CDC40 ENSGALG00000015061 6118 0.867 - - - - - - 0.867 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
15. DGCR2 ENSGALG00000005891 8405 0.864 - - - - - - 0.864 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
16. EGLN1 ENSGALG00000041422 11032 0.864 - - - - - - 0.864 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
17. PARP1 ENSGALG00000009228 39433 0.862 - - - - - - 0.862 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
18. KIF2C ENSGALG00000010120 8999 0.86 - - - - - - 0.860 - - - kinesin family member 2C, transcript variant X1
19. FNBP1L ENSGALG00000005850 9219 0.86 - - - - - - 0.860 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
20. R3HDM1 ENSGALG00000012246 6580 0.857 - - - - - - 0.857 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
21. TFDP1 ENSGALG00000016823 17019 0.851 - - - - - - 0.851 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
22. IK ENSGALG00000037172 12100 0.85 - - - - - - - 0.850 - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
23. CCNH ENSGALG00000015641 8051 0.845 - - - - - - 0.845 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
24. RRP1B ENSGALG00000035696 12309 0.844 - - - - - - 0.844 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
25. NOP58 ENSGALG00000008454 34630 0.844 - - - - - - 0.844 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
26. UBR2 ENSGALG00000009906 7717 0.843 - - - - - - 0.843 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
27. EIF2S1 ENSGALG00000009565 63906 0.842 - - - - - - 0.842 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
28. KLHDC4 ENSGALG00000037315 9828 0.841 - - - - - - 0.841 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
29. TMED7 ENSGALG00000028484 21008 0.84 - - - - - - 0.840 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
30. RUVBL1 ENSGALG00000005931 9379 0.838 - - - - - - 0.838 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
31. IFRD1 ENSGALG00000009448 8865 0.838 - - - - - - 0.838 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
32. TTC37 ENSGALG00000014670 5715 0.837 - - - - - - 0.837 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
33. TMTC2 ENSGALG00000010975 7040 0.836 - - - - - - 0.836 - - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
34. NAV2 ENSGALG00000003999 6587 0.835 - - - - - - 0.835 - - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
35. DERL1 ENSGALG00000033950 15074 0.835 - - - - - - 0.835 - - - derlin 1 [Source:NCBI gene;Acc:420350]
36. RNPS1 ENSGALG00000009288 13588 0.834 - - - - - - 0.834 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
37. RSL1D1 ENSGALG00000033690 13638 0.834 - - - - - - 0.834 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
38. FAM98A ENSGALG00000010428 9585 0.832 - - - - - - 0.832 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
39. DCAF7 ENSGALG00000000510 8681 0.832 - - - - - - 0.832 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
40. MTMR8 ENSGALG00000007590 6022 0.832 - - - - - - 0.832 - - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
41. PRPSAP2 ENSGALG00000005064 5549 0.832 - - - - - - 0.832 - - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
42. FCF1 ENSGALG00000010275 24928 0.831 - - - - - - 0.831 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
43. ANAPC1 ENSGALG00000008254 2519 0.831 - - - - - - 0.831 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
44. KRR1 ENSGALG00000010227 11783 0.83 - - - - - - 0.830 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
45. HSPA4 ENSGALG00000040882 20966 0.83 - - - - - - 0.830 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
46. CRNKL1 ENSGALG00000008429 7280 0.83 - - - - - - 0.830 - - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
47. SP3 ENSGALG00000031796 8997 0.827 - - - - - - 0.827 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
48. C1H12ORF23 C1H12ORF23 13234 0.827 - - - - - - 0.827 - - -
49. ASUN ASUN 17129 0.826 - - - - - - 0.826 - - -
50. CLNS1A ENSGALG00000008574 25675 0.825 - - - - - - 0.825 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
51. NUP50 ENSGALG00000014222 11743 0.825 - - - - - - 0.825 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
52. LAPTM4A ENSGALG00000016479 15973 0.825 - - - - - - 0.825 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
53. PPP1R2 ENSGALG00000029789 11594 0.823 - - - - - - 0.823 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
54. GALNT1 ENSGALG00000013135 13583 0.823 - - - - - - 0.823 - - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
55. SUPV3L1 ENSGALG00000004197 4141 0.823 - - - - - - 0.823 - - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
56. TARDBP ENSGALG00000002906 24748 0.822 - - - - - - 0.822 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
57. KLHL21 ENSGALG00000035211 6145 0.821 - - - - - - 0.821 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
58. SDHD ENSGALG00000007878 25129 0.82 - - - - - - 0.820 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
59. FAM125B FAM125B 2953 0.82 - - - - - - 0.820 - - -
60. ZBED4 ENSGALG00000032659 5313 0.82 - - - - - - 0.820 - - - zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
61. ATP2B1 ENSGALG00000030550 15123 0.819 - - - - - - 0.819 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
62. CCDC12 ENSGALG00000005487 8190 0.817 - - - - - - 0.817 - - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
63. MRPL20 ENSGALG00000001542 28764 0.816 - - - - - - 0.816 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
64. ARHGEF7 ENSGALG00000031009 10090 0.816 - - - - - - 0.816 - - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
65. PCNT ENSGALG00000007021 6428 0.815 - - - - - - 0.815 - - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
66. HMGB2 ENSGALG00000010745 89235 0.814 - - - - - - 0.814 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
67. FXR1 ENSGALG00000008864 10250 0.814 - - - - - - 0.814 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
68. TBL1XR1 ENSGALG00000039182 16983 0.812 - - - - - - 0.812 - - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
69. OSTC ENSGALG00000010526 19422 0.812 - - - - - - 0.812 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
70. ZBTB16 ENSGALG00000038540 5544 0.812 - - - - - - 0.812 - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
71. ACPL2 ACPL2 4670 0.812 - - - - - - 0.812 - - -
72. MLST8 ENSGALG00000005878 8116 0.811 - - - - - - 0.811 - - - MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
73. CSE1L ENSGALG00000004707 20653 0.811 - - - - - - 0.811 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
74. RFC1 ENSGALG00000014298 6516 0.81 - - - - - - 0.810 - - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
75. KDM3B ENSGALG00000007663 7189 0.809 - - - - - - 0.809 - - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
76. MAP2 ENSGALG00000002789 6597 0.809 - - - - - - 0.809 - - - microtubule associated protein 2, transcript variant X33
77. HOXA5 ENSGALG00000025929 6231 0.809 - - - - - - 0.809 - - - homeobox A5 [Source:NCBI gene;Acc:100858404]
78. API5 ENSGALG00000037968 18265 0.809 - - - - - - 0.809 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
79. CLN8 ENSGALG00000039606 4209 0.808 - - - - - - 0.808 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
80. UBR5 ENSGALG00000031282 12143 0.808 - - - - - - 0.808 - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
81. PTTG1 17936 0.807 - - - - - - 0.807 - - - pituitary tumor-transforming 1, transcript variant X1
82. KDM1A ENSGALG00000033469 20632 0.807 - - - - - - 0.807 - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
83. EBNA1BP2 ENSGALG00000009045 17453 0.807 - - - - - - 0.807 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
84. LSG1 ENSGALG00000007058 4591 0.807 - - - - - - 0.807 - - - large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
85. NEO1 ENSGALG00000001774 10165 0.806 - - - - - - 0.806 - - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
86. LOC776067 ENSGALG00000016808 9164 0.806 - - - - - - 0.806 - - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
87. PAXIP1 ENSGALG00000036064 3120 0.806 - - - - - - 0.806 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
88. TM9SF2L ENSGALG00000006487 5566 0.806 - - - - - - 0.806 - - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
89. CAMSAP1 ENSGALG00000001692 2617 0.805 - - - - - - 0.805 - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
90. MRPL40 ENSGALG00000001587 20893 0.805 - - - - - - 0.805 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
91. DDX19B ENSGALG00000039967 49600 0.804 - - - - - - 0.804 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
92. MAP4K3 ENSGALG00000039720 5124 0.804 - - - - - - 0.804 - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
93. SALL4 ENSGALG00000041365 6760 0.804 - - - - - - 0.804 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
94. CCDC88C ENSGALG00000040156 6191 0.804 - - - - - - 0.804 - - - coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
95. MAD2L2 ENSGALG00000004640 3971 0.802 - - - - - - 0.802 - - - MAD2 mitotic arrest deficient-like 2 (yeast) [Source:NCBI gene;Acc:419493]
96. LIMD2 ENSGALG00000000529 30617 0.802 - - - - - - 0.802 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
97. TMEM30A ENSGALG00000015904 8533 0.802 - - - - - - 0.802 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
98. COPG2 ENSGALG00000008144 4542 0.802 - - - - - - 0.802 - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
99. CELF1 ENSGALG00000008097 4717 0.802 - - - - - - 0.802 - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
100. ATG3 ENSGALG00000015204 11277 0.801 - - - - - - 0.801 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]

There are 569 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA