Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for GIN1

Gene Name Gene ID Reads Annotation
GIN1 ENSGALG00000015257 773 gypsy retrotransposon integrase 1 [Source:HGNC Symbol;Acc:HGNC:25959]











Genes with expression patterns similar to GIN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GIN1 ENSGALG00000015257 773 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 gypsy retrotransposon integrase 1 [Source:HGNC Symbol;Acc:HGNC:25959]
2. FNDC3A ENSGALG00000017002 1652 0.882 - - - - - - - 0.882 - - fibronectin type III domain containing 3A [Source:NCBI gene;Acc:418863]
3. FAM47E-STBD1 FAM47E-STBD1 1148 0.847 - - - - - - 0.847 - - -
4. MPP2 ENSGALG00000035580 383 0.829 - - - - - - 0.829 - - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
5. PPP1R1C ENSGALG00000008896 378 0.812 - - - - - - 0.812 - - - protein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]
6. PYGO1 ENSGALG00000004369 527 0.807 - - - - - - 0.807 - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
7. BAI3 BAI3 106 0.804 - - - - - - 0.804 - - -
8. ZNF335 ENSGALG00000041370 4740 0.803 - - - - - - - 0.803 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
9. TFAP2C ENSGALG00000007690 768 0.801 - - - - - - 0.801 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
10. ORC6 ENSGALG00000004342 454 0.8 - - - - - - - 0.800 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
11. OSBPL2 ENSGALG00000005195 94 0.798 - - - - - - 0.798 - - - oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
12. NALCN ENSGALG00000016868 164 0.798 - - - - - - 0.798 - - - sodium leak channel, non-selective [Source:HGNC Symbol;Acc:HGNC:19082]
13. QARS ENSGALG00000029980 4207 0.795 - - - - - - 0.795 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
14. METRN ENSGALG00000035634 1871 0.792 - - - - - - 0.792 - - - meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
15. ARHGAP20 ENSGALG00000017150 100 0.79 - - - - - - 0.790 - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
16. SCN9A ENSGALG00000027793 161 0.787 - - - - - - 0.787 - - - sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]
17. GABRG2 ENSGALG00000038042 211 0.787 - - - - - - 0.787 - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
18. GRHPR ENSGALG00000005423 1567 0.787 - - - - - - - 0.787 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
19. LGR5 ENSGALG00000010163 2931 0.786 - - - - - - - 0.786 - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
20. CKV1.1 CKV1.1 140 0.784 - - - - - - 0.784 - - -
21. ATG2B ENSGALG00000042088 918 0.781 - - - - - - 0.781 - - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
22. CHGA ENSGALG00000010820 1028 0.78 - - - - - - 0.780 - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
23. KIAA1671 ENSGALG00000005512 2540 0.778 - - - - - - - 0.778 - - KIAA1671 [Source:NCBI gene;Acc:768701]
24. PRKAA1 ENSGALG00000014832 547 0.778 - - - - - - - 0.778 - - protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
25. SLC5A11 ENSGALG00000005933 28 0.777 - - - - - - 0.777 - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
26. WHSC1L1 4065 0.772 - - - - - - 0.772 - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
27. OXSR1 ENSGALG00000005979 2905 0.77 - - - - - - 0.770 - - - oxidative stress responsive 1
28. CPE ENSGALG00000027788 153 0.77 - - - - - - 0.770 - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
29. PLEK2 ENSGALG00000009562 706 0.768 - - - - - - 0.768 - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
30. BLCAP ENSGALG00000027126 12200 0.768 - - - - - - 0.768 - - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
31. KIAA1107 1030 0.767 - - - - - - - 0.767 - - KIAA1107
32. ARHGAP18 ENSGALG00000031843 2117 0.766 - - - - - - - - 0.766 - Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]
33. UBAC2 ENSGALG00000016880 1343 0.766 - - - - - - 0.766 - - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
34. MAN1B1 ENSGALG00000037375 308 0.766 - - - - - - 0.766 - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
35. DPYSL4 ENSGALG00000010490 3431 0.766 - - - - - - 0.766 - - - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
36. DMD ENSGALG00000016281 5657 0.766 - - - - - - 0.766 - - - dystrophin [Source:NCBI gene;Acc:396236]
37. DMXL2 ENSGALG00000039924 672 0.766 - - - - - - 0.766 - - - Dmx like 2 [Source:HGNC Symbol;Acc:HGNC:2938]
38. RIMKLB ENSGALG00000040184 281 0.766 - - - - - - 0.766 - - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
39. OSTM1 ENSGALG00000015306 192 0.765 - - - - - - 0.765 - - - osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
40. TMEM150C ENSGALG00000011175 218 0.763 - - - - - - 0.763 - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
41. C3orf14 ENSGALG00000007182 758 0.762 - - - - - - - - 0.762 - chromosome 3 open reading frame 14 [Source:HGNC Symbol;Acc:HGNC:25024]
42. PTPRJ ENSGALG00000006382 891 0.761 - - - - - - - 0.761 - - protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
43. LUZP1 ENSGALG00000025858 947 0.761 - - - - - - 0.761 - - - leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
44. C26H6ORF89 C26H6ORF89 1826 0.759 - - - - - - 0.759 - - -
45. PHF11 ENSGALG00000019094 770 0.756 - - - - - - 0.756 - - - PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
46. NR2C1 ENSGALG00000011327 5109 0.755 - - - - - - 0.755 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
47. CKB ENSGALG00000011511 2100 0.754 - - - - - - 0.754 - - - creatine kinase B [Source:NCBI gene;Acc:396248]
48. VPS37B ENSGALG00000003743 185 0.754 - - - - - - 0.754 - - - VPS37B, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:25754]
49. ANXA8 ENSGALG00000005956 479 0.754 - - - - - - 0.754 - - - annexin A8, transcript variant X1
50. NOL8 ENSGALG00000004750 1433 0.754 - - - - - - 0.754 - - - nucleolar protein 8 [Source:HGNC Symbol;Acc:HGNC:23387]
51. ACSS1 ENSGALG00000008632 397 0.754 - - - - - - - 0.754 - - acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
52. CNTN1 ENSGALG00000009523 158 0.753 - - - - - - 0.753 - - - contactin 1 [Source:NCBI gene;Acc:417786]
53. RAPGEF5 ENSGALG00000034024 1264 0.752 - - - - - - 0.752 - - - Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]
54. ENSGALG00000003817 ENSGALG00000003817 45 0.75 - - - - - - 0.750 - - -
55. ZC3H12C ENSGALG00000017154 59 0.749 - - - - - - 0.749 - - - zinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]
56. LOC422106 ENSGALG00000019757 453 0.749 - - - - - - 0.749 - - - uncharacterized LOC422106
57. CFH ENSGALG00000002431 31 0.749 - - - - - - 0.749 - - - complement factor H, transcript variant X1
58. SKI ENSGALG00000001229 50 0.748 - - - - - - 0.748 - - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
59. SNX16 ENSGALG00000029678 1104 0.748 - - - - - - 0.748 - - - sorting nexin 16 [Source:NCBI gene;Acc:420202]
60. NBEAL2 ENSGALG00000039120 277 0.748 - - - - - - 0.748 - - - neurobeachin like 2 [Source:HGNC Symbol;Acc:HGNC:31928]
61. WBP2NL ENSGALG00000011908 23 0.748 - - - - - - 0.748 - - - Gallus gallus WBP2 N-terminal like (WBP2NL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318465]
62. NOTCH2 ENSGALG00000002922 3272 0.748 - - - - - - - 0.748 - - notch 2 [Source:NCBI gene;Acc:374031]
63. NPAT ENSGALG00000017162 1574 0.747 - - - - - - 0.747 - - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
64. DHX35 ENSGALG00000003658 1090 0.746 - - - - - - 0.746 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
65. MICAL3 ENSGALG00000013042 90 0.746 - - - - - - 0.746 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24694]
66. C8G ENSGALG00000040644 443 0.745 - - - - - - 0.745 - - - complement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]
67. C2H6orf52 ENSGALG00000012721 3631 0.745 - - - - - - 0.745 - - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
68. TIMM44 ENSGALG00000000352 5527 0.745 - - - - - - 0.745 - - - translocase of inner mitochondrial membrane 44 [Source:NCBI gene;Acc:420053]
69. Mar-06 Mar-06 1218 0.745 - - - - - - 0.745 - - -
70. PCYOX1L ENSGALG00000040340 2162 0.744 - - - - - - 0.744 - - - prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
71. RAB21 ENSGALG00000010183 7718 0.743 - - - - - - 0.743 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
72. CHD6 477 0.743 - - - - - - - 0.743 - - chromodomain helicase DNA binding protein 6, transcript variant X10
73. TRPC6 ENSGALG00000029416 281 0.743 - - - - - - 0.743 - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
74. C1H12ORF4 2696 0.742 - - - - - - 0.742 - - - chromosome 1 open reading frame, human C12orf4
75. NCBP2 ENSGALG00000006843 938 0.742 - - - - - - 0.742 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
76. SRSF1 ENSGALG00000005525 4376 0.742 - - - - - - 0.742 - - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
77. C3H6ORF154 C3H6ORF154 1078 0.741 - - - - - - 0.741 - - -
78. RAB19 ENSGALG00000012850 155 0.741 - - - - - - - 0.741 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
79. PITHD1 ENSGALG00000003986 11470 0.741 - - - - - - - 0.741 - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
80. IMMP2L ENSGALG00000027876 962 0.741 - - - - - - 0.741 - - - inner mitochondrial membrane peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:14598]
81. NPY2R ENSGALG00000009280 29 0.74 - - - - - - 0.740 - - - neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
82. CCDC135 CCDC135 220 0.74 - - - - - - 0.740 - - -
83. LSM14B ENSGALG00000005125 31 0.74 - - - - - 0.740 - - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
84. SOX10 ENSGALG00000012290 3942 0.739 - - - - - - 0.739 - - - SRY-box 10 [Source:NCBI gene;Acc:395573]
85. FAM172A ENSGALG00000014661 10565 0.737 - - - - - - - 0.737 - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
86. PLXNB2 ENSGALG00000039861 338 0.737 - - - - - - 0.737 - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
87. KCNK1 ENSGALG00000011005 1643 0.737 - - - - - - 0.737 - - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
88. GP1BB ENSGALG00000021529 348 0.735 - - - - - 0.735 - - - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
89. CACTIN ENSGALG00000024391 1408 0.734 - - - - - - 0.734 - - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
90. SLC27A6 ENSGALG00000000184 98 0.734 - - - - - - 0.734 - - - solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]
91. AMDHD2 ENSGALG00000009234 1730 0.733 - - - - - - 0.733 - - - Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
92. PARN ENSGALG00000003091 6363 0.733 - - - - - - - - 0.733 - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
93. DTNBP1 ENSGALG00000012703 539 0.733 - - - - - - 0.733 - - - dystrobrevin binding protein 1 [Source:NCBI gene;Acc:420840]
94. ENSGALG00000027927 ENSGALG00000027927 654 0.732 - - - - - - 0.732 - - -
95. FBXO32 ENSGALG00000041202 1066 0.732 - - - - - - - 0.732 - - F-box protein 32 [Source:NCBI gene;Acc:420343]
96. ENSGALG00000007997 ENSGALG00000007997 721 0.732 - - - - - 0.732 - - - -
97. TMEM248 ENSGALG00000033954 248 0.732 - - - - - - 0.732 - - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
98. ECHDC1 ENSGALG00000014828 958 0.732 - - - - - - 0.732 - - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
99. GPSM2 ENSGALG00000002090 50 0.729 - - - - - - 0.729 - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
100. CTSB ENSGALG00000030016 177 0.729 - - - - - - 0.729 - - - cathepsin B [Source:NCBI gene;Acc:396329]

There are 67 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA