Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for GHITM

Gene Name Gene ID Reads Annotation
GHITM ENSGALG00000021262 7159 growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]











Genes with expression patterns similar to GHITM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GHITM ENSGALG00000021262 7159 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
2. TMEM38B ENSGALG00000027472 2465 1.707 - - 0.792 - - - 0.915 - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
3. YWHAQ ENSGALG00000016433 3450 1.644 - - 0.828 - - - 0.816 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
4. MRPS35 ENSGALG00000036730 6327 1.633 - - 0.749 - - - 0.884 - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
5. CALCOCO2 ENSGALG00000001525 3121 1.633 - - - - - - 0.870 0.763 - - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
6. LRR1 ENSGALG00000012230 1062 1.626 - - 0.817 - - - 0.809 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
7. RPL22 ENSGALG00000000719 74238 1.618 - - 0.751 - - - 0.867 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
8. BTBD7 4136 1.603 - - - - - - 0.863 0.740 - - BTB domain containing 7, transcript variant X2
9. LMO4 ENSGALG00000006252 3686 1.597 - - 0.747 - - - 0.850 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
10. RUFY1 ENSGALG00000029706 4473 1.584 - - - - - - 0.850 0.734 - - RUN and FYVE domain containing 1 [Source:NCBI gene;Acc:426519]
11. DDX42 ENSGALG00000000581 8780 1.582 - - - - - - 0.879 0.703 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
12. B4GALNT4 ENSGALG00000004250 2150 1.58 - - - - - - 0.875 0.705 - - beta-1,4-N-acetyl-galactosaminyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:26315]
13. GNMT ENSGALG00000043290 3288 1.579 - - 0.788 - - - 0.791 - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
14. PWP1 ENSGALG00000012631 10536 1.577 - - - - - - 0.876 0.701 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
15. ARFIP1 ENSGALG00000041361 7351 1.568 - - - - - - 0.820 0.748 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
16. EXOSC8 ENSGALG00000017048 2939 1.563 - - - - - - - 0.771 0.792 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
17. COX11 ENSGALG00000027190 4475 1.562 - - - - - - 0.839 - 0.723 - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
18. KLHL15 ENSGALG00000016345 1638 1.556 - - 0.793 - - - - - 0.763 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
19. FDFT1 ENSGALG00000016665 3053 1.554 - - - - - - 0.828 - 0.726 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
20. CAT ENSGALG00000030187 7534 1.538 - - 0.741 - - - 0.797 - - - catalase [Source:NCBI gene;Acc:423600]
21. RFFL ENSGALG00000002225 928 1.531 - - - - - - 0.806 - 0.725 - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
22. MRPS22 ENSGALG00000005367 8307 1.521 - - - - - - 0.805 0.716 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
23. B4GAL-T7 B4GAL-T7 12356 1.513 - - - - - - 0.761 0.752 - -
24. ENSGALG00000013067 ENSGALG00000013067 10741 1.511 - - - - - - 0.774 0.737 - -
25. RAD17 ENSGALG00000015571 1374 1.51 - - - - - - 0.786 - 0.724 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
26. ZC3H7A ENSGALG00000003143 7114 1.499 - - - - - - 0.784 0.715 - - zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:HGNC:30959]
27. TBPL1 ENSGALG00000013981 3710 1.499 - - - - - - 0.763 0.736 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
28. TIPIN ENSGALG00000007649 3565 1.493 - - - - - - 0.758 - 0.735 - TIMELESS interacting protein [Source:NCBI gene;Acc:415548]
29. SCPEP1 ENSGALG00000003185 2322 1.488 - - 0.715 - - - - 0.773 - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
30. ARF4 ENSGALG00000005622 50567 1.485 - - 0.778 - - - - - 0.707 - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
31. ANAPC16 ENSGALG00000004410 18001 1.476 - - - - - - 0.767 0.709 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
32. LCLAT1 ENSGALG00000009056 5207 1.474 - - - - - - - 0.718 0.756 - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
33. TXNDC12 ENSGALG00000010569 13822 1.47 - - 0.723 - - - 0.747 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
34. ATP5J 14451 1.466 - - - - - - 0.762 0.704 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
35. TSN ENSGALG00000011652 905 1.466 - - 0.761 - - - - - 0.705 - translin [Source:NCBI gene;Acc:395955]
36. ENSGALG00000012158 ENSGALG00000012158 11937 0.936 - - 0.936 - - - - - - -
37. RAB34 ENSGALG00000026315 1193 0.93 - - 0.930 - - - - - - - RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
38. NXT2 ENSGALG00000008092 2477 0.929 - - 0.929 - - - - - - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
39. ACBD6 ACBD6 4293 0.923 - - 0.923 - - - - - - -
40. C1GALT1 ENSGALG00000009752 7148 0.921 - - - - - - 0.921 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
41. ENSGALG00000004032 ENSGALG00000004032 2010 0.92 - - 0.920 - - - - - - -
42. STRN3 ENSGALG00000040464 9045 0.916 - - 0.916 - - - - - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
43. WWC1 ENSGALG00000001826 4666 0.91 - - - - - - 0.910 - - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
44. TBC1D12 ENSGALG00000034044 5588 0.91 - - - - - - 0.910 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
45. ENSGALG00000007035 ENSGALG00000007035 8473 0.904 - - - - - - 0.904 - - -
46. TJP1 ENSGALG00000042552 3081 0.902 - - - - - - 0.902 - - - tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827]
47. NNT ENSGALG00000014869 8496 0.902 - - - - - - 0.902 - - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
48. UFL1 ENSGALG00000015580 3845 0.9 - - - - - - 0.900 - - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
49. SALL1 ENSGALG00000039238 3740 0.897 - - - - - - 0.897 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
50. LIG3 ENSGALG00000002288 7198 0.894 - - - - - - 0.894 - - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
51. COX20 ENSGALG00000027440 5881 0.894 - - - - - - 0.894 - - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
52. TRNT1 ENSGALG00000017368 11932 0.893 - - - - - - 0.893 - - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
53. PITPNB ENSGALG00000005654 21578 0.892 - - - - - - 0.892 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
54. IFT52 ENSGALG00000003523 1858 0.891 - - - - - - 0.891 - - - intraflagellar transport 52 [Source:NCBI gene;Acc:419165]
55. MRPL23 ENSGALG00000006561 13737 0.891 - - - - - - 0.891 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
56. USP5 ENSGALG00000014525 21883 0.886 - - - - - - 0.886 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
57. UQCRC1 ENSGALG00000005789 23201 0.885 - - 0.885 - - - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
58. CKB ENSGALG00000011511 2100 0.885 - - 0.885 - - - - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
59. FBXO33 ENSGALG00000010192 2917 0.884 - - - - - - 0.884 - - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
60. TMEM33 ENSGALG00000014248 6069 0.882 - - - - - - 0.882 - - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
61. C1D ENSGALG00000008765 14779 0.88 - - 0.880 - - - - - - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
62. CAPN1 ENSGALG00000041685 4011 0.878 - - - - - - 0.878 - - - calpain 1 [Source:NCBI gene;Acc:693249]
63. GPX8 ENSGALG00000026704 4497 0.877 - - - - - - 0.877 - - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
64. ADIPOR2 ENSGALG00000035533 6523 0.877 - - - - - - 0.877 - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
65. ABCC1 ENSGALG00000006646 2596 0.876 - - - - - - 0.876 - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
66. SOD2 ENSGALG00000011661 13178 0.876 - - 0.876 - - - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
67. TMEM14A ENSGALG00000019894 5279 0.876 - - - - - - 0.876 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
68. ARL5A ENSGALG00000041099 4592 0.875 - - - - - - 0.875 - - - ADP ribosylation factor like GTPase 5A [Source:HGNC Symbol;Acc:HGNC:696]
69. AP1AR ENSGALG00000028807 2398 0.874 - - - - - - 0.874 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
70. JKAMP ENSGALG00000012009 5781 0.874 - - - - - - 0.874 - - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
71. FBXW7 ENSGALG00000010103 5982 0.874 - - - - - - 0.874 - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
72. NARFL ENSGALG00000005365 2668 0.873 - - - - - - 0.873 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
73. PGRMC1 ENSGALG00000020260 19059 0.872 - - - - - - 0.872 - - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
74. BUD31 ENSGALG00000004705 19474 0.871 - - - - - - 0.871 - - - BUD31 homolog [Source:HGNC Symbol;Acc:HGNC:29629]
75. CCDC53 CCDC53 3732 0.871 - - - - - - 0.871 - - -
76. GARNL3 ENSGALG00000000847 3423 0.871 - - - - - - 0.871 - - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
77. FAM86A FAM86A 1860 0.87 - - - - - - 0.870 - - -
78. BEND5 ENSGALG00000010505 3298 0.87 - - - - - - 0.870 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
79. TMEM41B ENSGALG00000005815 2049 0.869 - - 0.869 - - - - - - - transmembrane protein 41B [Source:NCBI gene;Acc:423047]
80. ACTR10 ENSGALG00000012041 2752 0.867 - - - - - - 0.867 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
81. CLN6 ENSGALG00000007981 5656 0.867 - - - - - - 0.867 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
82. ANXA8 ENSGALG00000005956 479 0.867 - - 0.867 - - - - - - - annexin A8, transcript variant X1
83. PANK1 ENSGALG00000006431 2910 0.866 - - - - - - 0.866 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
84. CASP6 ENSGALG00000012186 6639 0.865 - - - - - - 0.865 - - - caspase 6 [Source:NCBI gene;Acc:395477]
85. EML1 1941 0.865 - - - - - - 0.865 - - - echinoderm microtubule associated protein like 1, transcript variant X11
86. ATXN7 ENSGALG00000007302 2596 0.865 - - - - - - 0.865 - - - ataxin 7, transcript variant X3
87. BSDC1 ENSGALG00000003405 3701 0.865 - - - - - - 0.865 - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
88. RNF144A ENSGALG00000028709 2855 0.865 - - - - - - 0.865 - - - ring finger protein 144A, transcript variant X1
89. GSKIP ENSGALG00000011088 3421 0.863 - - - - - - 0.863 - - - GSK3B interacting protein [Source:NCBI gene;Acc:423442]
90. CCDC132 CCDC132 2632 0.863 - - - - - - 0.863 - - -
91. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.862 - - - - - - 0.862 - - -
92. TAF1B ENSGALG00000016437 2318 0.862 - - - - - - 0.862 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
93. WWC3 ENSGALG00000034834 9392 0.861 - - - - - - 0.861 - - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
94. FOXK2 ENSGALG00000001577 6346 0.861 - - - - - - 0.861 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
95. ESCO1 ENSGALG00000014936 739 0.86 - - - - - - 0.860 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
96. FAM171B ENSGALG00000002646 837 0.859 - - 0.859 - - - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
97. C7orf50 ENSGALG00000004055 5786 0.859 - - - - - - 0.859 - - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
98. C11H19ORF12 C11H19ORF12 5149 0.859 - - - - - - 0.859 - - -
99. C12orf66 ENSGALG00000027682 2110 0.859 - - - - - - 0.859 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
100. PPIL2 ENSGALG00000042052 4349 0.859 - - - - - - 0.859 - - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]

There are 676 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA