Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GGA.8379

Gene Name Gene ID Reads Annotation
GGA.8379 GGA.8379 4419











Genes with expression patterns similar to GGA.8379

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GGA.8379 GGA.8379 4419 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. C14orf80 C14orf80 1921 1.696 - - - - - - 0.867 - - 0.829
3. NCAPG2 ENSGALG00000006525 2319 1.679 - - - - - - 0.883 - - 0.796 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
4. WDSUB1 ENSGALG00000012574 2038 1.664 - - - - - - 0.830 - - 0.834 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
5. CPSF2 ENSGALG00000010783 5236 1.648 - - - - - - 0.808 - - 0.840 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
6. CCNE2 ENSGALG00000040794 1229 1.646 - - - - - - 0.889 - - 0.757 cyclin E2 [Source:NCBI gene;Acc:420231]
7. ZFR ENSGALG00000003235 8466 1.642 - - - - - - 0.836 - - 0.806 zinc finger RNA binding protein, transcript variant X3
8. PEX2 ENSGALG00000035752 4427 1.61 - - - - - - - 0.776 - 0.834 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
9. RBM19 ENSGALG00000008289 10702 1.605 - - - - - - 0.859 - - 0.746 RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
10. SUV39H2 ENSGALG00000013920 4360 1.597 - - - - - - 0.834 - - 0.763 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
11. FAM193A ENSGALG00000015667 3075 1.588 - - - - - - 0.828 - - 0.760 family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
12. BRD1 ENSGALG00000029379 6047 1.585 - - - - - - 0.771 - - 0.814 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
13. SNRNP48 ENSGALG00000013005 1468 1.576 - - - - - - 0.799 - - 0.777 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
14. ZNF217 ZNF217 14511 1.574 - - - - - - - 0.797 - 0.777
15. NUP205 ENSGALG00000011662 4157 1.567 - - - - - - 0.846 0.721 - - nucleoporin 205
16. CETN1 ENSGALG00000026741 7243 1.562 - - - - - - 0.756 - - 0.806 centrin 1 [Source:NCBI gene;Acc:422668]
17. CDC73 ENSGALG00000002469 4586 1.548 - - - - - - 0.843 - - 0.705 cell division cycle 73 [Source:NCBI gene;Acc:424356]
18. CCNK ENSGALG00000011138 6416 1.535 - - - - - - 0.831 - - 0.704 cyclin K [Source:NCBI gene;Acc:423446]
19. KIF11 ENSGALG00000030597 5528 1.53 - - - - - - - 0.758 - 0.772 kinesin family member 11 [Source:NCBI gene;Acc:423809]
20. HNRNPLL ENSGALG00000008504 14719 1.527 - - - - - - 0.789 - - 0.738 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
21. CCND1 ENSGALG00000007555 6715 1.523 - - - - - - - 0.737 - 0.786 cyclin D1 [Source:NCBI gene;Acc:396341]
22. FANCL ENSGALG00000030022 7423 1.518 - - - - - - - 0.700 - 0.818 FA complementation group L [Source:NCBI gene;Acc:421202]
23. SDF2L1 ENSGALG00000031982 6084 1.517 - - - - - - - 0.733 - 0.784 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
24. FN3KRP ENSGALG00000028979 4160 1.513 - - - - - - 0.779 0.734 - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
25. ATP6V0A1 ENSGALG00000003256 4408 1.509 - - - - - - 0.724 - - 0.785 ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
26. SMG1 ENSGALG00000006829 1875 1.504 - - - - - - 0.772 0.732 - - SMG1, nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]
27. E2F7 ENSGALG00000031340 3430 1.495 - - - - - - 0.744 0.751 - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
28. CAMSAP2 ENSGALG00000002145 6109 1.494 - - - - - - 0.712 - - 0.782 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
29. TRAPPC4 ENSGALG00000007707 3568 1.494 - - - - - - 0.779 0.715 - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
30. TMX4 ENSGALG00000028587 3513 1.493 - - - - - - - 0.714 - 0.779 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
31. SYNGR2 ENSGALG00000027902 6953 1.493 - - - - - - 0.792 - - 0.701 Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
32. COIL ENSGALG00000003158 7806 1.467 - - - - - - 0.754 0.713 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
33. TBPL1 ENSGALG00000013981 3710 1.415 - - - - - - - 0.700 - 0.715 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
34. PARL ENSGALG00000002315 15943 0.938 - - - - - - 0.938 - - - presenilin associated rhomboid like
35. ARL2BP ENSGALG00000034102 2700 0.928 - - - - - - 0.928 - - - ADP ribosylation factor like GTPase 2 binding protein [Source:NCBI gene;Acc:426495]
36. BMI1 ENSGALG00000041267 6618 0.906 - - - - - - 0.906 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
37. VPS29 ENSGALG00000004529 22509 0.903 - - - - - - 0.903 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
38. OCRL ENSGALG00000003920 1812 0.898 - - - - - - 0.898 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
39. CLDND1 ENSGALG00000039538 5048 0.896 - - - - - - 0.896 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
40. TOP3B ENSGALG00000030051 5953 0.896 - - - - - - 0.896 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
41. FTSJ2 FTSJ2 2951 0.896 - - - - - - 0.896 - - -
42. CANX ENSGALG00000032148 11297 0.894 - - - - - - 0.894 - - - calnexin [Source:NCBI gene;Acc:416288]
43. SCAF4 ENSGALG00000033965 2027 0.892 - - - - - - 0.892 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
44. SQLE ENSGALG00000036915 4172 0.891 - - - - - - 0.891 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
45. DBNDD2 ENSGALG00000003921 8301 0.886 - - - - - - 0.886 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
46. NEK4 ENSGALG00000041428 4473 0.885 - - - - - - 0.885 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
47. CDC42SE2 ENSGALG00000027258 4725 0.885 - - - - - - 0.885 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
48. COPS8 ENSGALG00000033385 10166 0.884 - - - - - - 0.884 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
49. MCEE ENSGALG00000003913 1527 0.884 - - - - - - 0.884 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
50. URM1 ENSGALG00000004971 17880 0.883 - - - - - - 0.883 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
51. PAPD7 ENSGALG00000013061 2031 0.882 - - - - - - 0.882 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
52. GPN3 ENSGALG00000003807 6320 0.88 - - - - - - 0.880 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
53. LSM10 ENSGALG00000002127 2519 0.88 - - - - - - 0.880 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
54. B4GALT3 ENSGALG00000022891 2825 0.878 - - - - - - 0.878 - - - beta-1,4-galactosyltransferase 3
55. DPYSL3 ENSGALG00000007582 7743 0.876 - - - - - - 0.876 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
56. KRIT1 ENSGALG00000042651 4486 0.876 - - - - - - 0.876 - - - KRIT1, ankyrin repeat containing [Source:NCBI gene;Acc:420549]
57. PEX16 ENSGALG00000008421 3684 0.875 - - - - - - 0.875 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
58. ZFYVE19 ENSGALG00000008460 2750 0.874 - - - - - - 0.874 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
59. MBTPS1 ENSGALG00000003293 4843 0.874 - - - - - - 0.874 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
60. SRP72 ENSGALG00000011403 13666 0.872 - - - - - - 0.872 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
61. CCDC101 CCDC101 9111 0.872 - - - - - - 0.872 - - -
62. MTDH ENSGALG00000034050 9525 0.87 - - - - - - 0.870 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
63. DTYMK ENSGALG00000006305 11736 0.868 - - - - - - 0.868 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
64. SPCS2 ENSGALG00000019036 9496 0.868 - - - - - - 0.868 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
65. FLCN ENSGALG00000004816 4101 0.867 - - - - - - 0.867 - - - folliculin, transcript variant X1
66. IK ENSGALG00000037172 12100 0.867 - - - - - - 0.867 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
67. MED16 ENSGALG00000001978 2387 0.866 - - - - - - 0.866 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
68. TMEM68 ENSGALG00000031835 1691 0.866 - - - - - - - - - 0.866 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
69. MORC3 ENSGALG00000036556 2976 0.865 - - - - - - 0.865 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
70. EIF2D ENSGALG00000000856 8348 0.864 - - - - - - 0.864 - - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
71. PNPT1 ENSGALG00000043545 1306 0.864 - - - - - - - - - 0.864 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
72. INTS6 ENSGALG00000017018 3083 0.863 - - - - - - 0.863 - - - integrator complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14879]
73. PDHX ENSGALG00000033753 2799 0.862 - - - - - - 0.862 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
74. COX7A2 ENSGALG00000015906 62347 0.862 - - - - - - - - - 0.862 cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
75. GRTP1 ENSGALG00000016828 3145 0.861 - - - - - - - - - 0.861 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
76. PGAP2 ENSGALG00000027762 2583 0.86 - - - - - - 0.860 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
77. MTERFD1 MTERFD1 3640 0.859 - - - - - - - - - 0.859
78. SPG11 ENSGALG00000008180 1890 0.858 - - - - - - 0.858 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
79. ABHD17A ENSGALG00000041163 5578 0.858 - - - - - - 0.858 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
80. WIPI1 ENSGALG00000004215 3359 0.857 - - - - - - 0.857 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
81. RCAN3 ENSGALG00000004282 7778 0.856 - - - - - - 0.856 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
82. ARPC1B ENSGALG00000032588 2407 0.856 - - - - - - - - - 0.856 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
83. NDRG3 ENSGALG00000001492 5919 0.856 - - - - - - 0.856 - - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
84. TM2D3 ENSGALG00000026271 2566 0.855 - - - - - - 0.855 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
85. SMOC1 ENSGALG00000009415 2403 0.854 - - - - - - 0.854 - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
86. CMSS1 ENSGALG00000015267 2954 0.854 - - - - - - 0.854 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
87. TMEM135 2283 0.852 - - - - - - 0.852 - - - transmembrane protein 135, transcript variant X4
88. NSMCE4A ENSGALG00000009504 1302 0.852 - - - - - - 0.852 - - - NSE4 homolog A, SMC5-SMC6 complex component
89. PMPCB ENSGALG00000008280 6357 0.852 - - - - - - 0.852 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
90. CCNL1 ENSGALG00000009699 1033 0.852 - - - - - - 0.852 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
91. CHCHD3 ENSGALG00000006489 18592 0.852 - - - - - - 0.852 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
92. FNTA ENSGALG00000015397 3741 0.852 - - - - - - - - - 0.852 farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
93. RPIA ENSGALG00000015960 2784 0.851 - - - - - - 0.851 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
94. HEXA ENSGALG00000043828 4789 0.851 - - - - - - - - - 0.851 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
95. PKN3 532 0.851 - - - - - - 0.851 - - - protein kinase N3, transcript variant X2
96. NIN ENSGALG00000012361 2284 0.849 - - - - - - 0.849 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
97. LPAR1 ENSGALG00000015729 3874 0.849 - - - - - - 0.849 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
98. ITSN1 ENSGALG00000036677 5727 0.849 - - - - - - 0.849 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
99. CPNE1 ENSGALG00000040856 610 0.849 - - - - - - - - - 0.849 copine 1 [Source:NCBI gene;Acc:419134]
100. SMAP1 ENSGALG00000015959 4665 0.849 - - - - - - - - - 0.849 small ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:19651]

There are 665 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA