Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GFRA4

Gene Name Gene ID Reads Annotation
GFRA4 ENSGALG00000036589 2733 GDNF family receptor alpha 4 [Source:NCBI gene;Acc:395839]











Genes with expression patterns similar to GFRA4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GFRA4 ENSGALG00000036589 2733 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GDNF family receptor alpha 4 [Source:NCBI gene;Acc:395839]
2. MYT1 ENSGALG00000005932 2017 2.175 - - 0.707 - - 0.753 - - - 0.715 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
3. NGFR ENSGALG00000035950 13452 1.588 - - 0.747 - - 0.841 - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
4. FABP5 ENSGALG00000041344 3984 1.577 - - - - - 0.872 - - - 0.705 fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
5. SERPINF1 ENSGALG00000003015 5123 1.556 - - - - - 0.843 - 0.713 - - serpin family F member 1 [Source:NCBI gene;Acc:417561]
6. TNFIP6 TNFIP6 3024 1.554 - - - - - 0.799 - 0.755 - -
7. TCF15 ENSGALG00000026276 3646 1.537 - - 0.724 - - 0.813 - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
8. GRM3 ENSGALG00000006576 474 1.508 - - - - - 0.804 - - - 0.704 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
9. ELAVL4 ENSGALG00000010533 4978 1.466 - - - - - 0.727 - - - 0.739 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
10. NPM3 ENSGALG00000032329 21138 0.877 - - - - - 0.877 - - - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
11. ALS2CL ENSGALG00000005430 161 0.848 - - - - - - 0.848 - - - ALS2 C-terminal like [Source:HGNC Symbol;Acc:HGNC:20605]
12. PAX1 ENSGALG00000039040 3339 0.842 - - - - - 0.842 - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
13. BMP3 ENSGALG00000035052 3260 0.838 - - - - - 0.838 - - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
14. AIF1L ENSGALG00000029834 13866 0.838 - - - - - 0.838 - - - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
15. NKX-6.2 NKX-6.2 1370 0.824 - - - - - 0.824 - - - -
16. PARVA ENSGALG00000005438 91 0.823 - - - - - - 0.823 - - - parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
17. NMI ENSGALG00000012480 2172 0.82 - - - - - - 0.820 - - - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
18. MEOX2 ENSGALG00000010794 1556 0.819 - - - - - 0.819 - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
19. CRIP1 ENSGALG00000002771 4270 0.817 - - - - - 0.817 - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
20. KCNMB4 ENSGALG00000010044 377 0.815 - - - - - 0.815 - - - - potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:NCBI gene;Acc:417852]
21. GAP43 ENSGALG00000015089 505 0.814 - - - - - - - - - 0.814 growth associated protein 43 [Source:NCBI gene;Acc:427955]
22. AKAP12 ENSGALG00000036240 64617 0.807 - - - - - 0.807 - - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
23. OLFML3 ENSGALG00000001956 28633 0.797 - - - - - 0.797 - - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
24. SCML4 ENSGALG00000015309 499 0.795 - - - - - - - - - 0.795 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
25. ALDH6 ALDH6 771 0.793 - - - - - 0.793 - - - -
26. TTLL11 ENSGALG00000001389 393 0.787 - - - - - - 0.787 - - - tubulin tyrosine ligase like 11 [Source:HGNC Symbol;Acc:HGNC:18113]
27. JSC JSC 7982 0.786 - - - - - 0.786 - - - -
28. EFCAB6 ENSGALG00000014188 139 0.784 - - - - - - - - - 0.784 EF-hand calcium binding domain 6, transcript variant X3
29. FMOD ENSGALG00000034067 165 0.783 - - - - - 0.783 - - - - fibromodulin [Source:NCBI gene;Acc:395814]
30. CPZ ENSGALG00000030209 8822 0.781 - - - - - 0.781 - - - - carboxypeptidase Z [Source:NCBI gene;Acc:395266]
31. C9orf171 C9orf171 35 0.776 - - - - - - 0.776 - - -
32. MLF1 ENSGALG00000009654 619 0.776 - - - - - - 0.776 - - - myeloid leukemia factor 1, transcript variant X3
33. LECT1 LECT1 12694 0.776 - - - - - 0.776 - - - -
34. GDPD5 ENSGALG00000034967 1983 0.773 - - - - - 0.773 - - - - glycerophosphodiester phosphodiesterase domain containing 5 [Source:NCBI gene;Acc:419070]
35. TBX22 ENSGALG00000004093 781 0.772 - - - - - 0.772 - - - - T-box 22 [Source:NCBI gene;Acc:373895]
36. MCCC2L ENSGALG00000011255 889 0.771 - - - - - - 0.771 - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
37. NPTN ENSGALG00000001741 481 0.77 - - - - - - 0.770 - - - neuroplastin [Source:NCBI gene;Acc:415316]
38. GABRB3 ENSGALG00000029392 102 0.77 - - - - - - 0.770 - - - gamma-aminobutyric acid type A receptor beta3 subunit [Source:NCBI gene;Acc:396290]
39. ENSGALG00000010113 ENSGALG00000010113 508 0.769 - - - - - 0.769 - - - -
40. SULF1 ENSGALG00000039553 5115 0.767 - - - - - 0.767 - - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
41. MKX ENSGALG00000007426 65 0.764 - - - - - - 0.764 - - - mohawk homeobox [Source:HGNC Symbol;Acc:HGNC:23729]
42. PRDM8 ENSGALG00000038372 928 0.762 - - - - - 0.762 - - - - PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
43. CPNE8 ENSGALG00000007025 1002 0.761 - - - - - 0.761 - - - - copine 8 [Source:NCBI gene;Acc:417690]
44. GPM6A ENSGALG00000043480 2133 0.76 - - - - - 0.760 - - - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
45. SENP5 ENSGALG00000008545 909 0.76 - - - - - - 0.760 - - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
46. DDX28 ENSGALG00000003415 979 0.758 - - - - - - 0.758 - - - DEAD-box helicase 28
47. ENSGALG00000001515 ENSGALG00000001515 833 0.758 - - - - - - 0.758 - - -
48. KERA ENSGALG00000011270 4204 0.757 - - - - - 0.757 - - - - keratocan [Source:NCBI gene;Acc:373995]
49. KRT222 ENSGALG00000003859 53 0.757 - - - - - - 0.757 - - - keratin 222 [Source:NCBI gene;Acc:420046]
50. VDAC1 ENSGALG00000006503 864 0.755 - - - - - - 0.755 - - - voltage dependent anion channel 1 [Source:NCBI gene;Acc:416320]
51. MCCC2 ENSGALG00000036622 4184 0.754 - - - - - - 0.754 - - - methylcrotonoyl-CoA carboxylase 2
52. LMCD1 ENSGALG00000008349 928 0.753 - - - - - - 0.753 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
53. APBA2 ENSGALG00000003930 408 0.753 - - - - - - 0.753 - - - amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]
54. HPCAL1 ENSGALG00000016443 6633 0.753 - - - - - 0.753 - - - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
55. NSUN5 ENSGALG00000000891 1356 0.752 - - - - - - 0.752 - - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
56. ECEL1 ENSGALG00000030420 670 0.747 - - - - - - - - - 0.747 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
57. VTI1B ENSGALG00000009526 133 0.746 - - - - - - 0.746 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
58. TRIM71 ENSGALG00000019622 1633 0.746 - - - - - - 0.746 - - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
59. CCDC34 ENSGALG00000012194 1377 0.746 - - - - - - 0.746 - - - coiled-coil domain containing 34
60. PTPRN2 ENSGALG00000030054 947 0.745 - - - - - - 0.745 - - - protein tyrosine phosphatase, receptor type N2 [Source:HGNC Symbol;Acc:HGNC:9677]
61. HDAC9 ENSGALG00000010854 49 0.744 - - - - - 0.744 - - - - histone deacetylase 9 [Source:NCBI gene;Acc:420599]
62. ACSL4 ENSGALG00000008088 476 0.744 - - - - - - 0.744 - - - acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]
63. ALCAM ENSGALG00000015348 14283 0.743 - - - - - 0.743 - - - - activated leukocyte cell adhesion molecule [Source:NCBI gene;Acc:396092]
64. CSNK1E ENSGALG00000032257 2165 0.743 - - - - - - - - - 0.743 casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
65. OSGEPL1 ENSGALG00000037727 1879 0.743 - - - - - - 0.743 - - - O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
66. MYL3 ENSGALG00000005448 3379 0.742 - - 0.742 - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
67. EPHA3 ENSGALG00000015403 9811 0.742 - - - - - 0.742 - - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
68. LRRN2 ENSGALG00000000639 73 0.741 - - - - - - - - - 0.741 leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
69. GRK5 ENSGALG00000009403 45 0.739 - - - - - 0.739 - - - - G protein-coupled receptor kinase 5 [Source:HGNC Symbol;Acc:HGNC:4544]
70. PDGFB ENSGALG00000012178 509 0.738 - - - - - - - 0.738 - - platelet-derived growth factor beta polypeptide [Source:NCBI gene;Acc:374128]
71. FABP7 ENSGALG00000038933 6780 0.735 - - - - - - - - - 0.735 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
72. COL4A1 ENSGALG00000036798 12749 0.734 - - - - - 0.734 - - - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
73. NCOA6 ENSGALG00000001182 83 0.734 - - - - - - 0.734 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
74. GRIA2 ENSGALG00000009405 275 0.734 - - - - - - 0.734 - - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
75. POFUT1 ENSGALG00000006594 367 0.733 - - - - - - 0.733 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
76. ENSGALG00000026501 ENSGALG00000026501 39 0.732 - - - - - 0.732 - - - -
77. SPIRE1 ENSGALG00000013817 155 0.732 - - - - - 0.732 - - - - spire type actin nucleation factor 1 [Source:HGNC Symbol;Acc:HGNC:30622]
78. NEK6 ENSGALG00000001118 20333 0.731 - - - - - 0.731 - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
79. MNR2 ENSGALG00000011349 3340 0.731 - - - - - 0.731 - - - - homeodomain protein
80. AGL ENSGALG00000005407 93 0.731 - - - - - - 0.731 - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
81. FAM21A FAM21A 251 0.73 - - - - - - 0.730 - - -
82. HSPA8 ENSGALG00000006512 124825 0.729 - - - - - 0.729 - - - - heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
83. SMO ENSGALG00000036114 6559 0.728 - - - - - - - 0.728 - - smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
84. CADM2 ENSGALG00000043393 810 0.728 - - - - - - 0.728 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
85. SLC10A4 ENSGALG00000033908 300 0.727 - - - - - 0.727 - - - - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
86. HTR2C ENSGALG00000005853 90 0.727 - - - - - - 0.727 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
87. PHTF2 ENSGALG00000008335 722 0.726 - - - - - - 0.726 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
88. NCAM1 ENSGALG00000007839 19929 0.726 - - - - - - - - - 0.726 Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
89. FBXL18 ENSGALG00000004611 97 0.726 - - - - - - 0.726 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
90. NAPRT1 NAPRT1 227 0.726 - - - - - - 0.726 - - -
91. DGKQ ENSGALG00000002142 31 0.725 - - - - - 0.725 - - - - diacylglycerol kinase theta [Source:HGNC Symbol;Acc:HGNC:2856]
92. TSPAN14 ENSGALG00000002414 69 0.725 - - - - - - 0.725 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
93. RCL1 ENSGALG00000015024 133 0.724 - - - - - - 0.724 - - - RNA terminal phosphate cyclase like 1 [Source:HGNC Symbol;Acc:HGNC:17687]
94. MLLT3 ENSGALG00000015078 502 0.724 - - - - - 0.724 - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
95. EF1A EF1A 2378 0.723 - - - - - - - - - 0.723
96. THAP9 ENSGALG00000044141 1993 0.722 - - - - - - 0.722 - - - THAP domain containing 9 [Source:HGNC Symbol;Acc:HGNC:23192]
97. MKL2 186 0.722 - - - - - - 0.722 - - - MKL1/myocardin like 2, transcript variant X4
98. ENSGALG00000012463 ENSGALG00000012463 242 0.721 - - - - - - 0.721 - - -
99. AKR1D1 ENSGALG00000012834 15183 0.721 - - 0.721 - - - - - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
100. ARPC1B ENSGALG00000032588 2407 0.721 - - - - - - 0.721 - - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]

There are 55 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA