Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GFRA2

Gene Name Gene ID Reads Annotation
GFRA2 ENSGALG00000032856 1314 GDNF family receptor alpha 2 [Source:NCBI gene;Acc:395993]











Genes with expression patterns similar to GFRA2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GFRA2 ENSGALG00000032856 1314 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GDNF family receptor alpha 2 [Source:NCBI gene;Acc:395993]
2. EBF3 ENSGALG00000010461 1373 1.53 - - - - - 0.711 - 0.819 - - early B cell factor 3 [Source:HGNC Symbol;Acc:HGNC:19087]
3. gga-mir-7474 ENSGALG00000033766 5727 1.53 - - 0.815 - - - 0.715 - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
4. NGFR ENSGALG00000035950 13452 1.52 - - 0.769 - - 0.751 - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
5. MYOG ENSGALG00000000172 460 1.502 - - 0.744 - - - 0.758 - - - myogenin [Source:NCBI gene;Acc:374004]
6. ACTC1 ENSGALG00000009844 20914 1.489 - - 0.777 - - - 0.712 - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
7. AIF1L ENSGALG00000029834 13866 1.476 - - - - - 0.747 0.729 - - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
8. LECT1 LECT1 12694 1.458 - - - - - - 0.732 0.726 - -
9. KLHL31 ENSGALG00000016309 1518 1.456 - - 0.716 - - - 0.740 - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
10. TCF15 ENSGALG00000026276 3646 1.427 - - 0.704 - - 0.723 - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
11. DENND6B ENSGALG00000043771 22 0.938 - - - - - - - 0.938 - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
12. FGF10 ENSGALG00000014872 20 0.938 - - - - - - - 0.938 - - fibroblast growth factor 10 [Source:NCBI gene;Acc:395432]
13. RRAD ENSGALG00000005140 183 0.894 - - - - - - - 0.894 - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
14. FGF3 ENSGALG00000026853 89 0.873 - - - - - - - 0.873 - - fibroblast growth factor 3 [Source:NCBI gene;Acc:396267]
15. TAC1 ENSGALG00000009737 2211 0.869 - - - - - - - 0.869 - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
16. RBM24 ENSGALG00000012712 4138 0.866 - - 0.866 - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
17. ATP6AP1L ENSGALG00000015618 476 0.862 - - - - - - - - - 0.862 ATPase H+ transporting accessory protein 1 like [Source:HGNC Symbol;Acc:HGNC:28091]
18. PRDM16 ENSGALG00000036728 934 0.853 - - - - - - - 0.853 - - PR/SET domain 16 [Source:HGNC Symbol;Acc:HGNC:14000]
19. C9H2ORF82 ENSGALG00000040264 4201 0.83 - - - - - - - 0.830 - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
20. SCML4 ENSGALG00000015309 499 0.826 - - - - - - - 0.826 - - Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
21. ENSGALG00000023702 ENSGALG00000023702 2 0.821 - - - - - - - 0.821 - -
22. PROK2 ENSGALG00000007785 55 0.821 - - - - - - - 0.821 - - prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455]
23. TMEM182 ENSGALG00000038936 274 0.813 - - 0.813 - - - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
24. PCDH12 ENSGALG00000002544 36 0.811 - - - - - - - 0.811 - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
25. MYL3 ENSGALG00000005448 3379 0.804 - - 0.804 - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
26. TBX22 ENSGALG00000004093 781 0.801 - - - - - 0.801 - - - - T-box 22 [Source:NCBI gene;Acc:373895]
27. SCARA3 ENSGALG00000026651 2559 0.796 - - - - - - - 0.796 - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
28. SPON1 ENSGALG00000038775 16503 0.795 - - 0.795 - - - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
29. MYH1D ENSGALG00000027323 365 0.791 - - 0.791 - - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
30. CPZ ENSGALG00000030209 8822 0.789 - - - - - - 0.789 - - - carboxypeptidase Z [Source:NCBI gene;Acc:395266]
31. OSF-2 OSF-2 10433 0.787 - - - - - - - 0.787 - -
32. TNNT3 ENSGALG00000006572 1652 0.778 - - 0.778 - - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
33. COL8A1 ENSGALG00000015253 2505 0.771 - - - - - - - 0.771 - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
34. MECOM ENSGALG00000032577 5062 0.768 - - - - - - - 0.768 - - MDS1 and EVI1 complex locus [Source:HGNC Symbol;Acc:HGNC:3498]
35. C1QTNF3 ENSGALG00000027887 8646 0.767 - - 0.767 - - - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
36. ST3GAL5 ENSGALG00000033260 19 0.765 - - - - - - - 0.765 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
37. KLHL2 ENSGALG00000009554 37 0.765 - - - - - - - 0.765 - - kelch like family member 2 [Source:NCBI gene;Acc:422422]
38. MANSC4 32 0.765 - - - - - - - 0.765 - - MANSC domain containing 4, transcript variant X1
39. SMCR8 ENSGALG00000024082 44 0.764 - - - - - - - 0.764 - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
40. OTOG ENSGALG00000006208 17 0.763 - - - - - - - 0.763 - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
41. ACBD7 ENSGALG00000019663 2328 0.763 - - 0.763 - - - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
42. SOX10 ENSGALG00000012290 3942 0.757 - - - - - - - - - 0.757 SRY-box 10 [Source:NCBI gene;Acc:395573]
43. ENSGALG00000017301 ENSGALG00000017301 29 0.756 - - - - - - - 0.756 - -
44. BCL2L14 ENSGALG00000011544 11 0.756 - - - - - - - 0.756 - - BCL2 like 14 [Source:HGNC Symbol;Acc:HGNC:16657]
45. RFX8 ENSGALG00000045388 17 0.756 - - - - - - - 0.756 - - RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]
46. COL9A2 ENSGALG00000027526 4685 0.752 - - - - - - - 0.752 - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
47. TRIM55 ENSGALG00000041327 1097 0.751 - - 0.751 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
48. NEXN ENSGALG00000008945 1504 0.749 - - 0.749 - - - - - - - nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
49. KERA ENSGALG00000011270 4204 0.749 - - - - - - 0.749 - - - keratocan [Source:NCBI gene;Acc:373995]
50. EMX2 ENSGALG00000009302 2103 0.747 - - - - - - - 0.747 - - empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3341]
51. DCLRE1B ENSGALG00000028626 48 0.747 - - - - - - - 0.747 - - DNA cross-link repair 1B [Source:NCBI gene;Acc:428269]
52. GGMOXR1 GGMOXR1 6734 0.743 - - 0.743 - - - - - - -
53. PPAP2B PPAP2B 11002 0.74 - - - - - - 0.740 - - -
54. SSPN ENSGALG00000014042 638 0.739 - - 0.739 - - - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
55. NPM3 ENSGALG00000032329 21138 0.739 - - - - - 0.739 - - - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
56. EYA1 ENSGALG00000043033 1048 0.738 - - - - - - - 0.738 - - EYA transcriptional coactivator and phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:3519]
57. KCNMB4 ENSGALG00000010044 377 0.737 - - - - - 0.737 - - - - potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:NCBI gene;Acc:417852]
58. NTM ENSGALG00000001437 584 0.736 - - - - - - - 0.736 - - neurotrimin [Source:NCBI gene;Acc:395450]
59. ASTL ENSGALG00000037220 2775 0.736 - - - - - - - 0.736 - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
60. ALDH6 ALDH6 771 0.735 - - - - - 0.735 - - - -
61. KPNA6 ENSGALG00000003383 6937 0.734 - - - - - - 0.734 - - - karyopherin subunit alpha 6 [Source:NCBI gene;Acc:419656]
62. VIMENTIN VIMENTIN 33105 0.733 - - - - - - 0.733 - - -
63. PTCH1 ENSGALG00000012620 4840 0.733 - - - - - - 0.733 - - - patched 1 [Source:NCBI gene;Acc:395806]
64. SATB1 ENSGALG00000011254 1377 0.73 - - - - - - 0.730 - - - SATB homeobox 1 [Source:NCBI gene;Acc:420647]
65. SPSB3 ENSGALG00000002285 1329 0.729 - - - - - - - - 0.729 - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
66. COL9A3 ENSGALG00000005628 2842 0.729 - - - - - - - 0.729 - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
67. FOXD1 ENSGALG00000012644 2296 0.729 - - - - - - 0.729 - - - forkhead box D1 [Source:NCBI gene;Acc:396109]
68. ATP6V1G3 ENSGALG00000002207 151 0.726 - - - - - - - 0.726 - - ATPase H+ transporting V1 subunit G3 [Source:HGNC Symbol;Acc:HGNC:18265]
69. BHMT ENSGALG00000004518 4700 0.725 - - - - - - 0.725 - - - betaine--homocysteine S-methyltransferase
70. ENSGALG00000010113 ENSGALG00000010113 508 0.723 - - - - - - 0.723 - - -
71. ENSGALG00000028654 ENSGALG00000028654 236 0.723 - - 0.723 - - - - - - -
72. HSPB8 ENSGALG00000007383 5333 0.721 - - 0.721 - - - - - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
73. POMC ENSGALG00000016600 99 0.72 - - - - - - - 0.720 - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
74. ACAN ENSGALG00000006725 184 0.72 - - - - - - - 0.720 - - aggrecan [Source:NCBI gene;Acc:395798]
75. ZNF385B ENSGALG00000009012 290 0.719 - - - - - - - 0.719 - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
76. PMP22 ENSGALG00000031425 5358 0.718 - - 0.718 - - - - - - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
77. ANG ANG 15 0.718 - - - - - - - 0.718 - -
78. MYC ENSGALG00000033631 16949 0.718 - - - - - - 0.718 - - - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
79. EBF2 ENSGALG00000000242 753 0.717 - - 0.717 - - - - - - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
80. MYF6 ENSGALG00000010936 1143 0.714 - - 0.714 - - - - - - - myogenic factor 6 [Source:NCBI gene;Acc:417873]
81. MYF5 ENSGALG00000028091 1965 0.712 - - 0.712 - - - - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
82. DCDC2 ENSGALG00000042454 2306 0.711 - - - - - - - 0.711 - - doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
83. XIRP1 ENSGALG00000006025 729 0.71 - - - - - - 0.710 - - - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
84. HOXD12 ENSGALG00000009274 637 0.709 - - - - - - - 0.709 - - homeobox D12 [Source:NCBI gene;Acc:396178]
85. C2orf44 C2orf44 2869 0.707 - - - - - - 0.707 - - -
86. SEMA3C ENSGALG00000040444 5404 0.707 - - - - - - 0.707 - - - semaphorin 3C [Source:NCBI gene;Acc:374090]
87. HHIP ENSGALG00000009948 1536 0.707 - - - - - - 0.707 - - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
88. LRIG1 ENSGALG00000007483 19 0.704 - - - - - - - 0.704 - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
89. PRKCQ ENSGALG00000034970 19 0.704 - - - - - - - 0.704 - - protein kinase C theta [Source:HGNC Symbol;Acc:HGNC:9410]
90. BAI2 BAI2 11 0.704 - - - - - - - 0.704 - -
91. CLRN2 ENSGALG00000027453 3 0.704 - - - - - - - 0.704 - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
92. ANKRD6 ENSGALG00000015768 142 0.704 - - - - - - - 0.704 - - ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HGNC:17280]
93. GAB1 ENSGALG00000009898 2741 0.704 - - - - - - 0.704 - - - GRB2 associated binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4066]
94. CCNJ ENSGALG00000006955 47 0.704 - - - - - - - 0.704 - - cyclin J [Source:HGNC Symbol;Acc:HGNC:23434]
95. STMN3 ENSGALG00000006130 151 0.704 - - - - - - - 0.704 - - stathmin 3 [Source:NCBI gene;Acc:419263]
96. ARF1 ENSGALG00000005393 364 0.704 - - - - - - - 0.704 - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
97. SNORD100 SNORD100 270 0.704 - - - - - - - 0.704 - -
98. CAPN5 ENSGALG00000040478 2414 0.704 - - 0.704 - - - - - - - calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]
99. TNNI2 ENSGALG00000006591 690 0.704 - - 0.704 - - - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
100. SNTG2 ENSGALG00000016367 42 0.704 - - - - - - - 0.704 - - syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]

There are 15 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA