Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GFRA1

Gene Name Gene ID Reads Annotation
GFRA1 ENSGALG00000009173 371 GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]











Genes with expression patterns similar to GFRA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GFRA1 ENSGALG00000009173 371 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]
2. ENSGALG00000023731 ENSGALG00000023731 149 0.921 - - - - - - - 0.921 - -
3. AQP12 AQP12 11 0.915 - - - - - - - 0.915 - -
4. KIAA0513 ENSGALG00000025938 46 0.908 - - - - - - - 0.908 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
5. CD4 ENSGALG00000014477 19 0.904 - - - - - - - 0.904 - - CD4 molecule [Source:NCBI gene;Acc:395362]
6. STXBP1 ENSGALG00000040003 157 0.903 - - - - - - - 0.903 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
7. MAPT ENSGALG00000000625 659 0.903 - - - - - - - 0.903 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
8. INA ENSGALG00000028238 208 0.899 - - - - - - - 0.899 - - internexin neuronal intermediate filament protein alpha
9. ZIC3 ENSGALG00000031144 863 0.893 - - - - - - - 0.893 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
10. ICOS ENSGALG00000008656 27 0.89 - - - - - - - 0.890 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
11. SDR42E2 ENSGALG00000006964 57 0.886 - - - - - - - 0.886 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
12. APOAIV APOAIV 5 0.886 - - - - - - - 0.886 - -
13. GINS3 ENSGALG00000031209 32 0.886 - - - - - - - 0.886 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
14. CCDC96 9 0.886 - - - - - - - 0.886 - - coiled-coil domain containing 96
15. FOXP4 ENSGALG00000033497 13 0.886 - - - - - - - 0.886 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
16. USP53 ENSGALG00000011990 12 0.886 - - - - - - - 0.886 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
17. PLB1 PLB1 101 0.886 - - - - - - - 0.886 - -
18. STAB1 21 0.886 - - - - - - - 0.886 - - stabilin 1, transcript variant X2
19. ENSGALG00000019053 ENSGALG00000019053 8 0.886 - - - - - - - 0.886 - -
20. GFAP ENSGALG00000000909 21 0.886 - - - - - - - 0.886 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
21. TMCO4 ENSGALG00000004081 31 0.883 - - - - - - - 0.883 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
22. KRT20 ENSGALG00000019716 11 0.882 - - - - - - - 0.882 - - keratin 20 [Source:NCBI gene;Acc:420045]
23. IRG1 IRG1 21 0.88 - - - - - - - 0.880 - -
24. NXPH2 ENSGALG00000029083 353 0.879 - - - - - - - 0.879 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
25. CD200R1A CD200R1A 105 0.877 - - - - - - - 0.877 - -
26. ANKRD44 ENSGALG00000007996 17 0.876 - - - - - - - 0.876 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
27. LCA5L ENSGALG00000016125 99 0.876 - - - - - - - 0.876 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
28. ABCA8 ENSGALG00000021399 11 0.875 - - - - - - - 0.875 - - ATP binding cassette subfamily A member 8
29. DNAI2 ENSGALG00000004495 45 0.875 - - - - - - - 0.875 - - dynein axonemal intermediate chain 2
30. RIPK4 ENSGALG00000040189 102 0.874 - - - - - - - 0.874 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
31. KLRD1 ENSGALG00000014722 27 0.873 - - - - - - - 0.873 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
32. PTPRD ENSGALG00000015058 37 0.872 - - - - - - - 0.872 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
33. DZANK1 ENSGALG00000008731 120 0.871 - - - - - - - 0.871 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
34. LOC417973 ENSGALG00000019325 9 0.867 - - - - - - - 0.867 - - uncharacterized LOC417973, transcript variant X1
35. HAVCR1 ENSGALG00000017362 25 0.864 - - - - - - - 0.864 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
36. TP53I3 ENSGALG00000016502 178 0.863 - - - - - - - 0.863 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
37. NRIP3 ENSGALG00000005903 58 0.862 - - - - - - - 0.862 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
38. PAK2 ENSGALG00000006426 283 0.854 - - - - - - - 0.854 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
39. ENPP3 ENSGALG00000037587 25 0.853 - - - - - - - 0.853 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
40. EPB41L4A ENSGALG00000000234 113 0.852 - - - - - - - 0.852 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
41. RNASET2 ENSGALG00000011426 40 0.846 - - - - - - - 0.846 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
42. ASB13 ENSGALG00000008401 181 0.845 - - - - - - - 0.845 - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
43. ENSGALG00000021882 ENSGALG00000021882 63 0.845 - - - - - - - 0.845 - -
44. C4 ENSGALG00000032231 1961 0.843 - - - - - - - - 0.843 - complement 4 [Source:NCBI gene;Acc:426611]
45. ARHGAP25 ENSGALG00000035194 74 0.84 - - - - - - - 0.840 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
46. ENSGALG00000019522 ENSGALG00000019522 122 0.839 - - - - - - - 0.839 - -
47. ARRDC1 ENSGALG00000008475 80 0.837 - - - - - - - 0.837 - - arrestin domain containing 1 [Source:NCBI gene;Acc:427772]
48. ADCYAP1R1 ENSGALG00000005223 114 0.833 - - - - - - - 0.833 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
49. ABCC4 ENSGALG00000016896 154 0.831 - - - - - - - 0.831 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
50. NSUN5 ENSGALG00000000891 1356 0.83 - - - - - - - 0.830 - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
51. C14H16ORF42 C14H16ORF42 263 0.829 - - - - - - - 0.829 - -
52. SMYD1 ENSGALG00000015935 75 0.827 - - - - - - - 0.827 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
53. CCDC86 ENSGALG00000036935 5280 0.826 - - - - - - - 0.826 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
54. LMOD1 ENSGALG00000028721 81 0.823 - - - - - - - 0.823 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
55. TMEM135 2283 0.822 - - - - - - - - 0.822 - transmembrane protein 135, transcript variant X4
56. GPR61 ENSGALG00000040168 70 0.819 - - - - - - - 0.819 - - G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
57. PRSS35 ENSGALG00000015847 52 0.819 - - - - - - - 0.819 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
58. C12orf43 ENSGALG00000006965 437 0.818 - - - - - - - 0.818 - - chromosome 12 open reading frame 43 [Source:HGNC Symbol;Acc:HGNC:25719]
59. CNTN1 ENSGALG00000009523 158 0.816 - - - - - - - 0.816 - - contactin 1 [Source:NCBI gene;Acc:417786]
60. GGA.16412 GGA.16412 846 0.815 - - - - - - - 0.815 - -
61. TRAF-5 TRAF-5 102 0.813 - - - - - - - 0.813 - -
62. ACAP3 ENSGALG00000033293 605 0.809 - - - - - - - 0.809 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, transcript variant X6
63. DIP2C ENSGALG00000006652 1858 0.807 - - - - - - - - 0.807 - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
64. PCDH20 ENSGALG00000016934 187 0.806 - - - - - - 0.806 - - - protocadherin 20
65. MMEL1 ENSGALG00000001115 46 0.805 - - - - - - - 0.805 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
66. FAM219A ENSGALG00000005821 52 0.805 - - - - - - - 0.805 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
67. ZNFX1 ENSGALG00000004859 33 0.805 - - - - - - - 0.805 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
68. ENSGALG00000027516 ENSGALG00000027516 2 0.804 - - 0.804 - - - - - - -
69. ENSGALG00000027125 ENSGALG00000027125 2 0.804 - - 0.804 - - - - - - -
70. INPP4A ENSGALG00000029709 48 0.803 - - - - - - - 0.803 - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
71. ARHGEF37 ENSGALG00000039652 28 0.8 - - - - - - - 0.800 - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
72. CNP ENSGALG00000003457 191 0.8 - - - - - - - 0.800 - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:NCBI gene;Acc:395921]
73. SPINK4 ENSGALG00000043964 50 0.799 - - - - - - - 0.799 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
74. FURIN ENSGALG00000008341 2609 0.798 - - - - - - - 0.798 - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
75. FAM19A3 75 0.798 - - - - - - - 0.798 - - family with sequence similarity 19 member A3, C-C motif chemokine like, transcript variant X2
76. SMO ENSGALG00000036114 6559 0.798 - - - - - - - 0.798 - - smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
77. HDAC11 ENSGALG00000005092 176 0.795 - - - - - - - 0.795 - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
78. SUZ12 ENSGALG00000003277 177 0.787 - - - - - - - 0.787 - - SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
79. C1QTNF6 ENSGALG00000027067 493 0.787 - - - - - - - 0.787 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
80. MBNL2 ENSGALG00000016890 3162 0.78 - - - - - - - - 0.780 - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
81. KCNV1 ENSGALG00000031449 64 0.779 - - - - - - 0.779 - - - potassium voltage-gated channel modifier subfamily V member 1
82. DIRAS2 ENSGALG00000005323 11 0.779 - - - - - - 0.779 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
83. GLRA2 ENSGALG00000016571 10 0.779 - - - - - - 0.779 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
84. PLA2G1BL ENSGALG00000007236 4 0.779 - - - - - - 0.779 - - - phospholipase A2, major isoenzyme-like
85. FGA ENSGALG00000009266 291 0.779 - - - - - - 0.779 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
86. ADAM23 ENSGALG00000008582 28 0.779 - - - - - - 0.779 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
87. ENSGALG00000027367 ENSGALG00000027367 7 0.779 - - - - - - 0.779 - - -
88. ST8SIA6 ENSGALG00000008671 8 0.779 - - - - - - 0.779 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
89. LHX8 ENSGALG00000011369 77 0.779 - - - - - - 0.779 - - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
90. TRIM25 ENSGALG00000003144 12 0.779 - - - - - - 0.779 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
91. VRK2 ENSGALG00000032770 117 0.779 - - - - - - 0.779 - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
92. FGD4 ENSGALG00000012932 50 0.779 - - - - - - 0.779 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
93. LOC427545 ENSGALG00000004428 3 0.779 - - - - - - 0.779 - - - histamine H3 receptor-like
94. ZBTB11 ENSGALG00000015334 22 0.779 - - - - - - 0.779 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
95. COL4A3BP ENSGALG00000014952 96 0.779 - - - - - - 0.779 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
96. CDKN3 ENSGALG00000012220 41 0.779 - - - - - - - 0.779 - - cyclin dependent kinase inhibitor 3 [Source:NCBI gene;Acc:423562]
97. FOXP1 127 0.779 - - - - - - 0.779 - - - forkhead box P1, transcript variant X14
98. HPS3 ENSGALG00000040089 44 0.779 - - - - - - 0.779 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
99. CBLN4 ENSGALG00000030821 9 0.779 - - - - - - 0.779 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
100. FGF13 ENSGALG00000006508 8 0.779 - - - - - - 0.779 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]

There are 102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA