Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GFM1

Gene Name Gene ID Reads Annotation
GFM1 ENSGALG00000009634 7213 G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]











Genes with expression patterns similar to GFM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GFM1 ENSGALG00000009634 7213 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
2. POLR3E ENSGALG00000007008 4010 1.728 - - - - - - 0.940 0.788 - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
3. ARHGAP29 ENSGALG00000005683 3622 1.67 - - - - - - 0.930 0.740 - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
4. TBCCD1 ENSGALG00000006566 2696 1.66 - - - - - - 0.937 0.723 - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
5. METTL11A METTL11A 11876 1.656 - - 0.713 - - - 0.943 - - -
6. LEPROTL1 ENSGALG00000024482 4251 1.651 - - - - - - 0.937 0.714 - - leptin receptor overlapping transcript-like 1
7. SHQ1 ENSGALG00000007798 1982 1.645 - - - - - - 0.929 0.716 - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
8. INTS10 ENSGALG00000010130 6320 1.645 - - - - - - 0.937 0.708 - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
9. CCND1 ENSGALG00000007555 6715 1.632 - - - - - - 0.921 0.711 - - cyclin D1 [Source:NCBI gene;Acc:396341]
10. PSMB3 ENSGALG00000001597 22588 1.621 - - - - - - 0.764 0.857 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
11. FAM96B 14435 1.527 - - - - - - 0.791 0.736 - - family with sequence similarity 96 member B
12. PTDSS1 ENSGALG00000030185 5515 1.521 - - 0.749 - - - 0.772 - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
13. TRANK1 ENSGALG00000037629 2268 1.498 - - 0.758 - - - - 0.740 - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
14. PANX2 ENSGALG00000000003 2185 1.472 - - - - - - 0.710 0.762 - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
15. TFDP2 ENSGALG00000025759 13407 1.433 - - - - - - 0.716 0.717 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
16. PHF14 ENSGALG00000038041 13687 1.432 - - - - - - 0.716 0.716 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
17. COIL ENSGALG00000003158 7806 1.431 - - - - - - - 0.726 0.705 - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
18. UBA3 ENSGALG00000013410 6923 0.97 - - - - - - 0.970 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
19. MED7 ENSGALG00000003870 4244 0.966 - - - - - - 0.966 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
20. POLA1 ENSGALG00000016312 9440 0.96 - - - - - - 0.960 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
21. CHMP7 ENSGALG00000000409 8967 0.96 - - - - - - 0.960 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
22. TM9SF3 ENSGALG00000005534 15290 0.958 - - - - - - 0.958 - - - transmembrane 9 superfamily member 3
23. SLC25A14 ENSGALG00000004063 5574 0.958 - - - - - - 0.958 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
24. PRCP ENSGALG00000037521 4012 0.956 - - - - - - 0.956 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
25. BTAF1 ENSGALG00000030598 3556 0.956 - - - - - - 0.956 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
26. NDUFA9 ENSGALG00000017282 14358 0.954 - - - - - - 0.954 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
27. AP2B1 ENSGALG00000042125 13229 0.95 - - - - - - 0.950 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
28. CLCN3 ENSGALG00000009674 3704 0.947 - - - - - - 0.947 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
29. PNO1 ENSGALG00000009093 11153 0.947 - - - - - - 0.947 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
30. DNA2 ENSGALG00000004037 5426 0.945 - - - - - - 0.945 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
31. E2F6 ENSGALG00000016454 4747 0.945 - - - - - - 0.945 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
32. DNAJA3 ENSGALG00000007821 3963 0.945 - - - - - - 0.945 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
33. RILPL2 ENSGALG00000003321 5632 0.945 - - - - - - 0.945 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
34. MRPS11 ENSGALG00000006777 16009 0.944 - - - - - - 0.944 - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
35. ABCD3 ENSGALG00000005647 4844 0.944 - - - - - - 0.944 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
36. RGCC ENSGALG00000016954 1282 0.944 - - - - - - 0.944 - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
37. H2AFY_1 ENSGALG00000040141 4895 0.943 - - - - - - 0.943 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
38. RBM12B ENSGALG00000035129 4314 0.941 - - - - - - 0.941 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
39. YBX1 ENSGALG00000004848 20992 0.941 - - - - - - 0.941 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
40. AK6 ENSGALG00000020534 4791 0.941 - - - - - - 0.941 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
41. LARP1 ENSGALG00000040109 14808 0.94 - - - - - - 0.940 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
42. ARID4A ENSGALG00000012037 8554 0.94 - - - - - - 0.940 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
43. OGFOD1 6926 0.94 - - - - - - 0.940 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
44. GCLM ENSGALG00000005782 15789 0.939 - - - - - - 0.939 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
45. MYST2 MYST2 8078 0.939 - - - - - - 0.939 - - -
46. MED6 ENSGALG00000029743 9414 0.938 - - - - - - 0.938 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
47. TRAM1 ENSGALG00000041112 22876 0.938 - - - - - - 0.938 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
48. ZMYM2 ENSGALG00000017139 3747 0.937 - - - - - - 0.937 - - - zinc finger MYM-type containing 2, transcript variant X10
49. ATN1 ENSGALG00000014554 3270 0.937 - - - - - - 0.937 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
50. ENSGALG00000027854 ENSGALG00000027854 5007 0.937 - - - - - - 0.937 - - -
51. KIF15 ENSGALG00000036645 9946 0.936 - - - - - - 0.936 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
52. RRN3 ENSGALG00000041989 3934 0.936 - - - - - - 0.936 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
53. MSRA ENSGALG00000028032 2607 0.936 - - - - - - 0.936 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
54. IRAK2 ENSGALG00000008407 5934 0.936 - - - - - - 0.936 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
55. BPTF ENSGALG00000038222 7521 0.935 - - - - - - 0.935 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
56. RBBP6 ENSGALG00000006043 9708 0.935 - - - - - - 0.935 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
57. EI24 ENSGALG00000038097 24081 0.934 - - - - - - 0.934 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
58. KCTD9 ENSGALG00000000275 3455 0.934 - - - - - - 0.934 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
59. DISP1 3281 0.934 - - - - - - 0.934 - - - dispatched RND transporter family member 1, transcript variant X3
60. EIF4G3 ENSGALG00000010084 5881 0.933 - - - - - - 0.933 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
61. gga-mir-6643 ENSGALG00000027935 4442 0.933 - - - - - - 0.933 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
62. BFAR ENSGALG00000003111 1778 0.933 - - - - - - 0.933 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
63. THOC2 ENSGALG00000008507 9501 0.933 - - - - - - 0.933 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
64. GTF2E1 ENSGALG00000042320 7712 0.931 - - - - - - 0.931 - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
65. LATS2 4776 0.931 - - - - - - 0.931 - - - large tumor suppressor kinase 2
66. LACTB2 ENSGALG00000038745 3460 0.931 - - - - - - 0.931 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
67. NDUFB8 ENSGALG00000005704 5781 0.931 - - - - - - 0.931 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
68. COPE ENSGALG00000003153 19444 0.93 - - - - - - 0.930 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
69. ENSGALG00000002923 ENSGALG00000002923 2233 0.93 - - - - - - 0.930 - - -
70. NPHP3 ENSGALG00000034586 1465 0.93 - - - - - - 0.930 - - - nephrocystin 3, transcript variant X1
71. UBAC1 ENSGALG00000042564 598 0.928 - - - - - - 0.928 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
72. SEMA4B ENSGALG00000008297 11202 0.928 - - - - - - 0.928 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
73. PPP3R1 ENSGALG00000023648 3417 0.928 - - - - - - 0.928 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
74. MAP1LC3A ENSGALG00000038721 2230 0.928 - - - - - - 0.928 - - - microtubule associated protein 1 light chain 3 alpha
75. MOB2 ENSGALG00000030499 3658 0.927 - - - - - - 0.927 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
76. NCOA4 ENSGALG00000002066 10544 0.927 - - - - - - 0.927 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
77. LMNB2 ENSGALG00000000470 4364 0.927 - - - - - - 0.927 - - - lamin B2 [Source:NCBI gene;Acc:396222]
78. GCC2 ENSGALG00000016806 1085 0.926 - - - - - - 0.926 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
79. TMEM108 ENSGALG00000036412 2903 0.926 - - - - - - 0.926 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
80. HACE1 ENSGALG00000015415 1194 0.926 - - - - - - 0.926 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
81. CAMKK2 ENSGALG00000040131 2795 0.926 - - - - - - 0.926 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
82. SLC1A1 ENSGALG00000010187 637 0.925 - - - - - - 0.925 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
83. KLHL29 ENSGALG00000016495 582 0.925 - - - - - - 0.925 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
84. AKAP7 ENSGALG00000029794 3287 0.924 - - - - - - 0.924 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
85. POPDC3 ENSGALG00000027420 700 0.924 - - - - - - 0.924 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
86. CETN2 ENSGALG00000007510 1688 0.923 - - - - - - 0.923 - - - centrin 2 [Source:NCBI gene;Acc:422303]
87. POR ENSGALG00000002053 5223 0.922 - - - - - - 0.922 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
88. SCRN1 ENSGALG00000011176 3783 0.922 - - - - - - 0.922 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
89. SDCCAG8 ENSGALG00000010713 311 0.921 - - - - - - 0.921 - - - serologically defined colon cancer antigen 8, transcript variant X5
90. SDF4 ENSGALG00000001872 6382 0.921 - - - - - - 0.921 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
91. SREBF2 ENSGALG00000041687 4519 0.921 - - - - - - 0.921 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
92. COX7A2L ENSGALG00000037996 13646 0.919 - - - - - - 0.919 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
93. MTFMT ENSGALG00000007353 805 0.918 - - - - - - 0.918 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
94. ARPC4 ENSGALG00000006691 33311 0.918 - - - - - - 0.918 - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
95. NCAM1 ENSGALG00000007839 19929 0.917 - - - - - - 0.917 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
96. BCAS1 ENSGALG00000007796 379 0.917 - - - - - - 0.917 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
97. SOD2 ENSGALG00000011661 13178 0.916 - - - - - - 0.916 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
98. ATE1 ENSGALG00000009502 3751 0.916 - - - - - - 0.916 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
99. IMPACT ENSGALG00000015093 1334 0.914 - - - - - - 0.914 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
100. CDKL1 ENSGALG00000012295 1732 0.913 - - - - - - 0.913 - - - cyclin dependent kinase like 1 [Source:HGNC Symbol;Acc:HGNC:1781]

There are 504 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA