Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GEN1

Gene Name Gene ID Reads Annotation
GEN1 ENSGALG00000016468 336 GEN1, Holliday junction 5' flap endonuclease, transcript variant X2











Genes with expression patterns similar to GEN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GEN1 ENSGALG00000016468 336 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 GEN1, Holliday junction 5' flap endonuclease, transcript variant X2
2. FUCA2 ENSGALG00000013773 67 0.878 - - - - - - - 0.878 - - alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]
3. KPNA5 ENSGALG00000014937 28 0.865 - - - - - - - 0.865 - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
4. MPP2 ENSGALG00000035580 383 0.858 - - - - - - - 0.858 - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
5. MOB1A ENSGALG00000039203 240 0.843 - - - - - - - 0.843 - - MOB kinase activator 1A [Source:HGNC Symbol;Acc:HGNC:16015]
6. RTCA 1995 0.838 - - - - - - - 0.838 - - RNA 3'-terminal phosphate cyclase
7. C8orf34 ENSGALG00000034561 286 0.832 - - - - - - - 0.832 - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
8. HTR1F ENSGALG00000015494 7 0.832 - - - - - - - 0.832 - - 5-hydroxytryptamine receptor 1F [Source:HGNC Symbol;Acc:HGNC:5292]
9. LOC422224 ENSGALG00000005964 204 0.828 - - - - - - - 0.828 - - family with sequence similarity 162, member B, transcript variant X2
10. SULT1B1 ENSGALG00000023120 523 0.824 - - - - - - - 0.824 - - sulfotransferase family cytosolic 1B member 1 [Source:NCBI gene;Acc:395227]
11. MRAS ENSGALG00000011592 1264 0.823 - - - - - - - 0.823 - - muscle RAS oncogene homolog [Source:NCBI gene;Acc:395149]
12. FOXP2 ENSGALG00000009424 101 0.82 - - - - - - - 0.820 - - forkhead box P2 [Source:HGNC Symbol;Acc:HGNC:13875]
13. TBX2 ENSGALG00000034297 57 0.82 - - - - - - - 0.820 - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
14. FBLN7 ENSGALG00000046358 27 0.818 - - - - - - - 0.818 - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
15. BPIL ENSGALG00000021025 8 0.816 - - - - - - - 0.816 - - bactericidal permeability-increasing protein-like, transcript variant X2
16. ATP13A3 ENSGALG00000007075 202 0.815 - - - - - - - 0.815 - - ATPase 13A3 [Source:HGNC Symbol;Acc:HGNC:24113]
17. HINFP ENSGALG00000006806 15 0.813 - - - - - - - 0.813 - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
18. PLXNB1 23 0.813 - - - - - - - 0.813 - - plexin B1, transcript variant X2
19. ATP8A2 ENSGALG00000017106 31 0.813 - - - - - - - 0.813 - - ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]
20. MOGAT1 ENSGALG00000005217 12 0.813 - - - - - - - 0.813 - - monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
21. SLC16A12 ENSGALG00000006421 4 0.813 - - - - - - - 0.813 - - solute carrier family 16 member 12 [Source:HGNC Symbol;Acc:HGNC:23094]
22. A4GNT ENSGALG00000006600 11 0.813 - - - - - - - 0.813 - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
23. TMEM117 ENSGALG00000009596 48 0.811 - - - - - - - 0.811 - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
24. ENSGALG00000006389 ENSGALG00000006389 41 0.81 - - - - - - - 0.810 - -
25. PDE4DIP 277 0.81 - - - - - - - 0.810 - - phosphodiesterase 4D interacting protein
26. ATP6AP1L ENSGALG00000015618 476 0.805 - - - - - - - 0.805 - - ATPase H+ transporting accessory protein 1 like [Source:HGNC Symbol;Acc:HGNC:28091]
27. L3MBTL3 ENSGALG00000034030 113 0.803 - - - - - - - 0.803 - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
28. INHBA ENSGALG00000034616 49 0.803 - - - - - - - 0.803 - - inhibin subunit beta A [Source:NCBI gene;Acc:396361]
29. NCLN ENSGALG00000013369 37 0.802 - - - - - - - 0.802 - - nicalin [Source:NCBI gene;Acc:426048]
30. DIRC2 ENSGALG00000032632 137 0.802 - - - - - - - 0.802 - - disrupted in renal carcinoma 2 [Source:HGNC Symbol;Acc:HGNC:16628]
31. CFAP206 ENSGALG00000015810 16 0.801 - - - - - - - 0.801 - - cilia and flagella associated protein 206, transcript variant X3
32. DLG2 56 0.797 - - - - - - - 0.797 - - discs large MAGUK scaffold protein 2, transcript variant X24
33. SENP5 ENSGALG00000008545 909 0.797 - - - - - - - - - 0.797 SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
34. CCP110 ENSGALG00000006925 59 0.796 - - - - - - - 0.796 - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
35. GYS2 ENSGALG00000013265 14 0.795 - - - - - - - 0.795 - - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
36. BNC1 ENSGALG00000006041 63 0.792 - - - - - - - 0.792 - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
37. KLF12 ENSGALG00000016926 197 0.791 - - - - - - - 0.791 - - Kruppel like factor 12 [Source:HGNC Symbol;Acc:HGNC:6346]
38. SHPK ENSGALG00000004637 2386 0.791 - - - - - - - 0.791 - - sedoheptulokinase, transcript variant X1
39. C22orf39 ENSGALG00000044654 1364 0.791 - - - - - - - 0.791 - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
40. FANCD2 ENSGALG00000003720 634 0.791 - - - - - - - 0.791 - - Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
41. ARHGAP27 376 0.788 - - - - - - - 0.788 - - Rho GTPase activating protein 27, transcript variant X4
42. NKX1-1 ENSGALG00000035650 187 0.786 - - - - - - - 0.786 - - NK1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:24975]
43. PIFO ENSGALG00000023763 11 0.786 - - - - - - - 0.786 - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
44. VPS18 ENSGALG00000008496 594 0.781 - - - - - - - 0.781 - - VPS18, CORVET/HOPS core subunit [Source:NCBI gene;Acc:423207]
45. APLNR ENSGALG00000004841 176 0.778 - - - - - - - 0.778 - - apelin receptor [Source:HGNC Symbol;Acc:HGNC:339]
46. TMEM9 ENSGALG00000000226 635 0.778 - - - - - - - 0.778 - - transmembrane protein 9 [Source:HGNC Symbol;Acc:HGNC:18823]
47. MED15 ENSGALG00000006430 814 0.777 - - - - - - - 0.777 - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
48. DNAJB4 ENSGALG00000008916 68 0.777 - - - - - - - 0.777 - - DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]
49. SNORD2 SNORD2 51 0.775 - - - - - - - - - 0.775
50. FAM171B ENSGALG00000002646 837 0.773 - - - - - - - 0.773 - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
51. MS4A15 MS4A15 151 0.773 - - - - - - - 0.773 - -
52. CD34 ENSGALG00000001177 48 0.768 - - - - - - - 0.768 - - CD34 molecule, transcript variant X3
53. VEPH1 ENSGALG00000009682 51 0.766 - - - - - - - 0.766 - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
54. TMEM52B ENSGALG00000034698 169 0.764 - - - - - - - 0.764 - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
55. UNC13D ENSGALG00000002234 44 0.764 - - - - - - - 0.764 - - unc-13 homolog D [Source:HGNC Symbol;Acc:HGNC:23147]
56. MGAT4A ENSGALG00000030780 823 0.761 - - - - - - - 0.761 - - mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A [Source:NCBI gene;Acc:418692]
57. TMX2 ENSGALG00000007350 9052 0.76 - - - - - - - 0.760 - - thioredoxin related transmembrane protein 2, transcript variant X2
58. HLCS ENSGALG00000016047 30 0.76 - - - - - - - - - 0.760 holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
59. TLR4 ENSGALG00000007001 116 0.76 - - - - - - - 0.760 - - toll like receptor 4 [Source:NCBI gene;Acc:417241]
60. TULP4 ENSGALG00000037377 563 0.76 - - - - - - - 0.760 - - tubby like protein 4 [Source:HGNC Symbol;Acc:HGNC:15530]
61. PLCB4 ENSGALG00000008907 623 0.759 - - - - - - - 0.759 - - phospholipase C beta 4 [Source:NCBI gene;Acc:416730]
62. SPINK2 SPINK2 202 0.756 - - - - - - - 0.756 - -
63. LOC423277 ENSGALG00000009552 1221 0.754 - - - - - - - - - 0.754 galectin-related protein-like, transcript variant X1
64. NADK2 ENSGALG00000003558 79 0.75 - - - - - - - 0.750 - - NAD kinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26404]
65. DMRTB1 ENSGALG00000029023 35 0.748 - - - - - - - 0.748 - - DMRT like family B with proline rich C-terminal 1 [Source:NCBI gene;Acc:429107]
66. CEP68 ENSGALG00000008787 1591 0.748 - - - - - - - 0.748 - - centrosomal protein 68 [Source:HGNC Symbol;Acc:HGNC:29076]
67. SLC38A6 ENSGALG00000011893 737 0.744 - - - - - - - 0.744 - - solute carrier family 38 member 6 [Source:HGNC Symbol;Acc:HGNC:19863]
68. SEPP1 SEPP1 35 0.743 - - - - - - - 0.743 - -
69. TLR3 ENSGALG00000013468 35 0.743 - - - - - - - 0.743 - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
70. HIRA ENSGALG00000033598 296 0.741 - - - - - - - - - 0.741 histone cell cycle regulator [Source:NCBI gene;Acc:374074]
71. ENSGALG00000028657 ENSGALG00000028657 1664 0.741 - - - - - - - 0.741 - -
72. PITPNM2 ENSGALG00000003645 17 0.741 - - - - - - - 0.741 - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
73. SPI1 ENSGALG00000008127 170 0.74 - - - - - - - 0.740 - - Spi-1 proto-oncogene [Source:NCBI gene;Acc:395879]
74. FABP6 ENSGALG00000001445 1254 0.739 - - - - - - - - - 0.739 fatty acid binding protein 6 [Source:NCBI gene;Acc:416154]
75. STEAP3 ENSGALG00000012117 403 0.737 - - - - - - - 0.737 - - STEAP3 metalloreductase [Source:HGNC Symbol;Acc:HGNC:24592]
76. PODN ENSGALG00000021869 71 0.736 - - - - - - - 0.736 - - podocan [Source:HGNC Symbol;Acc:HGNC:23174]
77. GCH1 ENSGALG00000012200 445 0.734 - - - - - - - 0.734 - - GTP cyclohydrolase 1 [Source:NCBI gene;Acc:396146]
78. RBM41 ENSGALG00000004832 838 0.732 - - - - - - - 0.732 - - RNA binding motif protein 41 [Source:HGNC Symbol;Acc:HGNC:25617]
79. NKIRAS1 ENSGALG00000011289 311 0.73 - - - - - - - 0.730 - - NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
80. YTHDC1 ENSGALG00000035906 471 0.73 - - - - - - - - - 0.730 YTH domain containing 1 [Source:NCBI gene;Acc:422656]
81. DTWD1 ENSGALG00000005673 803 0.728 - - - - - - - 0.728 - - DTW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30926]
82. SNAPC4 ENSGALG00000044726 36 0.728 - - - - - - - - - 0.728 small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
83. SLC29A1 ENSGALG00000010182 1522 0.727 - - - - - - - 0.727 - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
84. STK10 ENSGALG00000002816 1194 0.727 - - - - - - - 0.727 - - serine/threonine kinase 10 [Source:NCBI gene;Acc:416204]
85. GATSL3 668 0.723 - - - - - - - - - 0.723 GATS protein like 3, transcript variant X2
86. NRP1 ENSGALG00000007140 695 0.721 - - - - - - - 0.721 - - neuropilin 1 [Source:NCBI gene;Acc:395560]
87. VAV2 ENSGALG00000002699 503 0.721 - - - - - - - 0.721 - - vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
88. ABLIM1 ENSGALG00000009048 19 0.721 - - - - - - - - - 0.721 actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
89. PRAG1 ENSGALG00000019003 293 0.718 - - - - - - - 0.718 - - PEAK1 related, kinase-activating pseudokinase 1 [Source:HGNC Symbol;Acc:HGNC:25438]
90. ANTXRL ENSGALG00000005969 230 0.716 - - - - - - - - - 0.716 anthrax toxin receptor-like
91. NRBP2 ENSGALG00000029760 1902 0.715 - - - - - - - - - 0.715 nuclear receptor binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19339]
92. RIF1 ENSGALG00000012484 2248 0.714 - - - - - - - 0.714 - - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
93. ITSN1 ENSGALG00000036677 5727 0.713 - - - - - - - 0.713 - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
94. ENSGALG00000021830 ENSGALG00000021830 413 0.712 - - - - - - - 0.712 - -
95. AKIRIN2 ENSGALG00000015791 3858 0.711 - - - - - - - 0.711 - - akirin 2 [Source:NCBI gene;Acc:421821]
96. IQCH ENSGALG00000007909 128 0.71 - - - - - - - 0.710 - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
97. SNX20 ENSGALG00000038374 406 0.71 - - - - - - - 0.710 - - sorting nexin 20 [Source:NCBI gene;Acc:415726]
98. ARHGEF10L ENSGALG00000043128 171 0.709 - - - - - - - 0.709 - - Rho guanine nucleotide exchange factor 10 like [Source:HGNC Symbol;Acc:HGNC:25540]
99. TMEM251 ENSGALG00000017387 3423 0.709 - - - - 0.709 - - - - - transmembrane protein 251 [Source:NCBI gene;Acc:423422]
100. DSEL ENSGALG00000042505 92 0.709 - - - - - - - - - 0.709 dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]

There are 11 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA