Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GEM

Gene Name Gene ID Reads Annotation
GEM ENSGALG00000032506 439 GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]











Genes with expression patterns similar to GEM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GEM ENSGALG00000032506 439 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 GTP binding protein overexpressed in skeletal muscle [Source:NCBI gene;Acc:404771]
2. B3GAT2 ENSGALG00000031590 615 1.603 - - - - - - 0.805 - 0.798 - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
3. SNX20 ENSGALG00000038374 406 1.602 - - - - - - 0.804 0.798 - - sorting nexin 20 [Source:NCBI gene;Acc:415726]
4. PACSIN2 ENSGALG00000014159 601 1.56 - - - - - 0.731 - 0.829 - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
5. GTF3C4 ENSGALG00000031016 1221 1.503 - - - - - 0.763 - - 0.740 - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
6. KLHL17 ENSGALG00000002199 754 1.486 - - - - - - 0.743 - 0.743 - kelch like family member 17 [Source:HGNC Symbol;Acc:HGNC:24023]
7. CHD5 ENSGALG00000000747 365 1.481 - - - - - - 0.776 - 0.705 - chromodomain helicase DNA binding protein 5, transcript variant X17
8. COL6A2 ENSGALG00000039216 892 0.945 - - - - - - - - 0.945 - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
9. RREB1 ENSGALG00000012799 125 0.927 - - - - - - - - 0.927 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
10. TMEM69 ENSGALG00000010279 716 0.925 - - - - - - - - 0.925 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
11. TTPA ENSGALG00000030031 500 0.917 - - - - - - - - 0.917 - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
12. ENSGALG00000014946 ENSGALG00000014946 40 0.913 - - - - - - - - 0.913 -
13. PSMG2 ENSGALG00000013863 351 0.907 - - - - - - - - 0.907 - proteasome assembly chaperone 2 [Source:HGNC Symbol;Acc:HGNC:24929]
14. EPHB2 ENSGALG00000004741 390 0.905 - - - - - - - - 0.905 - EPH receptor B2 [Source:NCBI gene;Acc:396513]
15. PCDH20 ENSGALG00000016934 187 0.903 - - - - - - - - 0.903 - protocadherin 20
16. AHSA2 1504 0.9 - - - - - - - - 0.900 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
17. PPP1R13B ENSGALG00000011548 88 0.899 - - - - - - - - 0.899 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
18. 5-MCDG 5-MCDG 142 0.897 - - - - - - - - 0.897 -
19. TAPT1 ENSGALG00000014486 2022 0.895 - - - - - - - - 0.895 - transmembrane anterior posterior transformation 1 [Source:NCBI gene;Acc:422824]
20. TDRD7 ENSGALG00000012350 594 0.893 - - - - - - - - 0.893 - tudor domain containing 7 [Source:NCBI gene;Acc:430492]
21. ENSGALG00000008689 ENSGALG00000008689 232 0.893 - - - - - - - - 0.893 -
22. ITGA8 ENSGALG00000008747 406 0.883 - - - - - - - - 0.883 - integrin subunit alpha 8 [Source:NCBI gene;Acc:396225]
23. NPNT ENSGALG00000043555 3002 0.88 - - - - - - - - 0.880 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
24. GNA12 ENSGALG00000004368 692 0.875 - - - - - - - - 0.875 - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
25. SLC3A1 ENSGALG00000009973 608 0.872 - - - - - 0.872 - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
26. WDR1 ENSGALG00000014957 15700 0.871 - - - - - - - - 0.871 - WD repeat domain 1 [Source:NCBI gene;Acc:422842]
27. ENSGALG00000007355 ENSGALG00000007355 2149 0.867 - - - - - - - - 0.867 -
28. TMEM200A ENSGALG00000002282 77 0.865 - - - - - - 0.865 - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
29. ANGPT4 ENSGALG00000040755 489 0.865 - - - - - - - - 0.865 - angiopoietin 4 [Source:HGNC Symbol;Acc:HGNC:487]
30. ECHDC3 ENSGALG00000006690 1299 0.861 - - - - - - - - 0.861 - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
31. TCTE3 ENSGALG00000011189 106 0.861 - - - - - 0.861 - - - - t-complex-associated-testis-expressed 3 [Source:HGNC Symbol;Acc:HGNC:11695]
32. KCTD8 ENSGALG00000014225 47 0.86 - - - - - - 0.860 - - - potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
33. OSBPL10 45 0.86 - - - - - - 0.860 - - - oxysterol binding protein like 10
34. CLCN7 ENSGALG00000030826 3173 0.859 - - - - - - - - 0.859 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
35. TIAR TIAR 2471 0.858 - - - - - - - - 0.858 -
36. CRABP2 ENSGALG00000029140 559 0.857 - - - - - - 0.857 - - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
37. ENSGALG00000016441 ENSGALG00000016441 264 0.853 - - - - - - 0.853 - - -
38. CYP20A1 ENSGALG00000008730 930 0.852 - - - - - - - - 0.852 - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
39. C1GALT1 ENSGALG00000009752 7148 0.852 - - - - - - - - 0.852 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
40. TOX2 ENSGALG00000003106 2472 0.851 - - - - - - - - 0.851 - TOX high mobility group box family member 2, transcript variant X1
41. ST6GAL2 ENSGALG00000016803 24 0.85 - - - - - - 0.850 - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
42. SYNJ2 ENSGALG00000013727 17 0.843 - - - - - - 0.843 - - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
43. ANTXR2 ENSGALG00000043675 52 0.843 - - - - - - 0.843 - - - ANTXR cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:21732]
44. HINFP ENSGALG00000006806 15 0.843 - - - - - - 0.843 - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
45. SRGAP2 ENSGALG00000000816 97 0.843 - - - - - - 0.843 - - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
46. ZDHHC8 ENSGALG00000002124 35 0.843 - - - - - - 0.843 - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
47. MFSD10 ENSGALG00000015652 211 0.84 - - - - - - 0.840 - - - major facilitator superfamily domain containing 10, transcript variant X4
48. ENSGALG00000026142 ENSGALG00000026142 85 0.84 - - - - - - 0.840 - - -
49. ZDHHC22 ENSGALG00000023099 10 0.839 - - - - - - 0.839 - - - zinc finger DHHC-type containing 22 [Source:HGNC Symbol;Acc:HGNC:20106]
50. TGFBRAP1 ENSGALG00000016795 81 0.839 - - - - - - 0.839 - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
51. NAIF1 ENSGALG00000027734 1551 0.837 - - - - - - - - 0.837 - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
52. C13H5ORF41 C13H5ORF41 1051 0.833 - - - - - - - - 0.833 -
53. GNG11 ENSGALG00000029899 327 0.832 - - - - - - - - 0.832 - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
54. STOX1 330 0.832 - - - - - - - - 0.832 - storkhead box 1, transcript variant X3
55. LEMD3 ENSGALG00000009873 347 0.831 - - - - - - - - 0.831 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
56. ASNS ENSGALG00000009748 11822 0.83 - - - - - - - - 0.830 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
57. VTI1A ENSGALG00000008880 279 0.829 - - - - - - - - 0.829 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
58. ALOX5AP ENSGALG00000026781 28 0.827 - - - - - - 0.827 - - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
59. VPS33A ENSGALG00000004440 2030 0.827 - - - - - - - - 0.827 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
60. EEA1 ENSGALG00000011280 923 0.826 - - - - - - 0.826 - - - early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
61. ENSGALG00000027412 ENSGALG00000027412 202 0.826 - - - - - - 0.826 - - -
62. PPM1F ENSGALG00000039121 26 0.825 - - - - - - 0.825 - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
63. PEX7 ENSGALG00000013874 34 0.824 - - - - - - 0.824 - - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
64. MAP3K8 ENSGALG00000007356 188 0.823 - - - - - - 0.823 - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
65. ALDH6A1 ENSGALG00000010211 29 0.822 - - - - - - 0.822 - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
66. RAD21 ENSGALG00000029523 25658 0.822 - - - - - - - - 0.822 - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
67. IMPG2 ENSGALG00000015322 74 0.821 - - - - - - 0.821 - - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
68. CTSZ ENSGALG00000007462 630 0.82 - - - - - - 0.820 - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
69. CCDC175 17 0.82 - - - - - - 0.820 - - - coiled-coil domain containing 175
70. DIAPH1 DIAPH1 357 0.82 - - - - - - - - 0.820 -
71. PPFIA1 ENSGALG00000035774 5258 0.82 - - - - - - - - 0.820 - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
72. LAMA5 486 0.819 - - - - - - - - 0.819 - laminin subunit alpha 5, transcript variant X3
73. ANKRD54 ENSGALG00000012299 1588 0.819 - - - - - - - - 0.819 - ankyrin repeat domain 54, transcript variant X1
74. STOML1 ENSGALG00000001470 472 0.818 - - - - - - - 0.818 - - stomatin like 1 [Source:NCBI gene;Acc:415303]
75. C5H15ORF57 C5H15ORF57 4113 0.817 - - - - - - - - 0.817 -
76. PAPOLA ENSGALG00000033099 20532 0.817 - - - - - - - - 0.817 - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
77. CDX2 ENSGALG00000034983 34 0.817 - - - - - - 0.817 - - - caudal type homeobox 2 [Source:NCBI gene;Acc:374205]
78. GGA.16412 GGA.16412 846 0.817 - - - - - - - - 0.817 -
79. gga-mir-1466 ENSGALG00000025170 487 0.817 - - - - - - - - 0.817 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
80. NUDT6 ENSGALG00000011834 1309 0.816 - - - - - - - - 0.816 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
81. GPSM1 ENSGALG00000001797 943 0.816 - - - - - - - - 0.816 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
82. CGN ENSGALG00000000920 407 0.816 - - - - - - - - 0.816 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
83. MYCBP2 ENSGALG00000016915 2374 0.816 - - - - - - - - 0.816 - MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
84. CCDC171 ENSGALG00000015103 349 0.816 - - - - - - - - 0.816 - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
85. TRERF1 ENSGALG00000009896 42 0.816 - - - - - - 0.816 - - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
86. TMEM178B ENSGALG00000028444 31 0.816 - - - - - - 0.816 - - - transmembrane protein 178B [Source:NCBI gene;Acc:418120]
87. ASIC2 ENSGALG00000000367 72 0.815 - - - - - - 0.815 - - - acid sensing ion channel subunit 2, transcript variant X2
88. KIAA1841 ENSGALG00000007825 22 0.813 - - - - - - 0.813 - - - KIAA1841 [Source:NCBI gene;Acc:421196]
89. CCDC41 CCDC41 160 0.813 - - - - - - 0.813 - - -
90. WFDC2 ENSGALG00000031164 37 0.811 - - - - - - 0.811 - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
91. GOLGA1 ENSGALG00000001025 334 0.811 - - - - - 0.811 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
92. TSC22D3 ENSGALG00000027069 1222 0.81 - - - - - - - - 0.810 - TSC22 domain family member 3 [Source:NCBI gene;Acc:768091]
93. FAM129A ENSGALG00000004812 269 0.81 - - - - - - - - 0.810 - family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
94. DTWD2 ENSGALG00000002250 1604 0.806 - - - - - - - - 0.806 - DTW domain containing 2 [Source:NCBI gene;Acc:427386]
95. NRDE2 ENSGALG00000010677 3453 0.805 - - - - - - - - 0.805 - NRDE-2, necessary for RNA interference, domain containing [Source:HGNC Symbol;Acc:HGNC:20186]
96. CEP70 ENSGALG00000012087 7992 0.805 - - - - - - - - 0.805 - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
97. DLG3 ENSGALG00000041900 3016 0.804 - - - - - - - - 0.804 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
98. NLE1 ENSGALG00000004691, ENSGALG00000036963 1239 0.804 - - - - - - - - 0.804 - notchless homolog 1, transcript variant X1
99. KIF20B 554 0.803 - - - - - - - - 0.803 - kinesin family member 20B, transcript variant X8
100. RPS6KA5 ENSGALG00000030580 218 0.802 - - - - - - - - 0.802 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]

There are 281 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA