Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GDNF

Gene Name Gene ID Reads Annotation
GDNF ENSGALG00000003716 7 glial cell derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:4232]











Genes with expression patterns similar to GDNF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GDNF ENSGALG00000003716 7 4 - - 1.000 1.000 - 1.000 - - - 1.000 glial cell derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:4232]
2. K123 ENSGALG00000041978 16 1.709 - - 1.000 - - 0.709 - - - - K123 protein [Source:NCBI gene;Acc:395873]
3. ALPI ENSGALG00000023866 19 1.501 - - 0.792 - - 0.709 - - - - alkaline phosphatase, intestinal, transcript variant X2
4. DLK1 ENSGALG00000011244 5 1 - - 1.000 - - - - - - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
5. CMTM4 ENSGALG00000005251 5 1 - - 1.000 - - - - - - - CKLF like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19175]
6. DEPTOR ENSGALG00000005790 6 1 - - 1.000 - - - - - - - DEP domain containing MTOR-interacting protein
7. VWA3A 6 1 - - - 1.000 - - - - - - von Willebrand factor A domain containing 3A, transcript variant X4
8. TRPM6 3 1 - - 1.000 - - - - - - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
9. ENSGALG00000014037 ENSGALG00000014037 3 1 - - 1.000 - - - - - - -
10. CNKSR3 ENSGALG00000027159 41 1 - - - 1.000 - - - - - - CNKSR family member 3, transcript variant X2
11. GJD4 ENSGALG00000007065 1 1 - - 1.000 - - - - - - - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
12. ENSGALG00000027162 ENSGALG00000027162 8 1 - - - 1.000 - - - - - -
13. MFSD11 ENSGALG00000001777 8 1 - - 1.000 - - - - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
14. SHROOM4 ENSGALG00000033953 3 1 - - 1.000 - - - - - - - shroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]
15. CALCR ENSGALG00000009509 7 1 - - 1.000 - - - - - - - calcitonin receptor [Source:HGNC Symbol;Acc:HGNC:1440]
16. MADCAM1 ENSGALG00000028341 6 1 - - - 1.000 - - - - - - mucosal vascular addressin cell adhesion molecule 1
17. LIN7A ENSGALG00000010939 8 1 - - 1.000 - - - - - - - lin-7 homolog A, crumbs cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:17787]
18. COQ2 ENSGALG00000041294 25 1 - - - 1.000 - - - - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
19. ISPD ENSGALG00000010795 7 1 - - 1.000 - - - - - - - isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
20. ENSGALG00000026782 ENSGALG00000026782 0 1 - - - 1.000 - - - - - -
21. ENSGALG00000028322 ENSGALG00000028322 19 1 - - 1.000 - - - - - - -
22. FXR FXR 52 1 - - - 1.000 - - - - - -
23. LDB1 ENSGALG00000007641 2 1 - - - 1.000 - - - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
24. KIAA1522 ENSGALG00000003539 1 1 - - 1.000 - - - - - - - KIAA1522 [Source:HGNC Symbol;Acc:HGNC:29301]
25. IMPG1 ENSGALG00000015897 4 1 - - 1.000 - - - - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
26. GPRC6A ENSGALG00000014925 21 1 - - 1.000 - - - - - - - G protein-coupled receptor class C group 6 member A [Source:HGNC Symbol;Acc:HGNC:18510]
27. HTR5A ENSGALG00000006362 1 1 - - - 1.000 - - - - - - 5-hydroxytryptamine receptor 5A [Source:HGNC Symbol;Acc:HGNC:5300]
28. THBD ENSGALG00000044442 6 1 - - - 1.000 - - - - - - thrombomodulin
29. USH1G ENSGALG00000038769 4 1 - - - 1.000 - - - - - - USH1 protein network component sans [Source:HGNC Symbol;Acc:HGNC:16356]
30. FGA ENSGALG00000009266 291 1 - - 1.000 - - - - - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
31. ADMP ENSGALG00000037408 24 1 - - - 1.000 - - - - - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
32. MSGN1 ENSGALG00000016469 17 1 - - 1.000 - - - - - - - mesogenin 1 [Source:NCBI gene;Acc:395419]
33. PSKH1 5 1 - - 1.000 - - - - - - - protein serine kinase H1, transcript variant X1
34. HPSE2 ENSGALG00000007508 1 1 - - 1.000 - - - - - - - heparanase 2 (inactive), transcript variant X4
35. PGBD5 ENSGALG00000011111 1 1 - - - 1.000 - - - - - - piggyBac transposable element derived 5 [Source:HGNC Symbol;Acc:HGNC:19405]
36. A2ML2 ENSGALG00000014252 3 1 - - 1.000 - - - - - - - alpha-2-macroglobulin-like 2, transcript variant X6
37. INHBB ENSGALG00000028770 2 1 - - - 1.000 - - - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
38. TEKT1 ENSGALG00000006064 18 1 - - - 1.000 - - - - - - tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
39. ACD ENSGALG00000044706 6 1 - - 1.000 - - - - - - - ACD, shelterin complex subunit and telomerase recruitment factor, transcript variant X4
40. FSD2 ENSGALG00000005996 2 1 - - 1.000 - - - - - - - fibronectin type III and SPRY domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18024]
41. 5S_2 5S_2 58 1 - - 1.000 - - - - - - -
42. LICOS LICOS 13 1 - - - 1.000 - - - - - -
43. TRIM66 ENSGALG00000005958 5 1 - - 1.000 - - - - - - - tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
44. CCDC60 ENSGALG00000046262 0 1 - - - 1.000 - - - - - - coiled-coil domain containing 60 [Source:HGNC Symbol;Acc:HGNC:28610]
45. VLDL VLDL 13 1 - - - 1.000 - - - - - -
46. BTN1A1 ENSGALG00000000589 20 1 - - 1.000 - - - - - - - butyrophilin subfamily 1 member A1 [Source:NCBI gene;Acc:420061]
47. VTG2 ENSGALG00000001863 1 1 - - - 1.000 - - - - - - vitellogenin 2 [Source:NCBI gene;Acc:424533]
48. VWC2L ENSGALG00000003472 13 1 - - - 1.000 - - - - - - von Willebrand factor C domain containing protein 2 like [Source:HGNC Symbol;Acc:HGNC:37203]
49. RNF180 ENSGALG00000014743 3 1 - - 1.000 - - - - - - - ring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]
50. ENSGALG00000026418 ENSGALG00000026418 2 1 - - 1.000 - - - - - - -
51. LRRC72 9 1 - - - 1.000 - - - - - - leucine rich repeat containing 72, transcript variant X4
52. TMEM52B ENSGALG00000034698 169 1 - - - 1.000 - - - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
53. CDHR5 CDHR5 1 1 - - - 1.000 - - - - - -
54. ENSGALG00000011567 ENSGALG00000011567 2 1 - - 1.000 - - - - - - -
55. CSMD1 ENSGALG00000035230 12 1 - - 1.000 - - - - - - - CUB and Sushi multiple domains 1 [Source:HGNC Symbol;Acc:HGNC:14026]
56. ENSGALG00000026222 ENSGALG00000026222 3 1 - - 1.000 - - - - - - -
57. VMO1 ENSGALG00000017172 1 1 - - - 1.000 - - - - - - vitelline membrane outer layer 1 homolog [Source:NCBI gene;Acc:418974]
58. FLI1 ENSGALG00000001161 2 1 - - - 1.000 - - - - - - Fli-1 proto-oncogene, ETS transcription factor [Source:NCBI gene;Acc:419723]
59. FAM71D ENSGALG00000043908 2 1 - - 1.000 - - - - - - - family with sequence similarity 71, member D
60. ZMAT3 ENSGALG00000040948 4 1 - - - 1.000 - - - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
61. TSHB ENSGALG00000002550 0 1 - - - 1.000 - - - - - - thyroid stimulating hormone beta [Source:NCBI gene;Acc:395937]
62. ABCG5 ENSGALG00000009955 4 1 - - 1.000 - - - - - - - ATP binding cassette subfamily G member 5 [Source:HGNC Symbol;Acc:HGNC:13886]
63. CROCC 5 1 - - 1.000 - - - - - - - ciliary rootlet coiled-coil, rootletin, transcript variant X6
64. UMODL1 ENSGALG00000016157 1 1 - - - 1.000 - - - - - - uromodulin like 1 [Source:HGNC Symbol;Acc:HGNC:12560]
65. KCNK10 ENSGALG00000010598 7 1 - - 1.000 - - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
66. C2 ENSGALG00000035721 5 1 - - - 1.000 - - - - - - complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
67. GAS2L1 ENSGALG00000036731 2 1 - - 1.000 - - - - - - - growth arrest specific 2 like 1 [Source:HGNC Symbol;Acc:HGNC:16955]
68. FRMPD3 ENSGALG00000028975 3 1 - - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
69. ENSGALG00000023927 ENSGALG00000023927 0 1 - - - 1.000 - - - - - -
70. ENSGALG00000004223 ENSGALG00000004223 7 1 - - 1.000 - - - - - - -
71. PLD4 ENSGALG00000011646 0 1 - - - 1.000 - - - - - - phospholipase D family member 4 [Source:HGNC Symbol;Acc:HGNC:23792]
72. PRUNE2 ENSGALG00000015167 37 1 - - - 1.000 - - - - - - prune homolog 2, transcript variant X5
73. GRID2 ENSGALG00000010397 6 1 - - - 1.000 - - - - - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
74. DNAH14 ENSGALG00000045078 1 1 - - 1.000 - - - - - - - dynein, axonemal, heavy chain 14
75. KLHL23 ENSGALG00000020737 13 1 - - - 1.000 - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
76. AQP8 10 1 - - 1.000 - - - - - - - aquaporin 8
77. CHST9 ENSGALG00000019489 21 1 - - 1.000 - - - - - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
78. P2RY1 ENSGALG00000010357 11 1 - - - 1.000 - - - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
79. GPR132 ENSGALG00000027407 9 1 - - 1.000 - - - - - - - G protein-coupled receptor 132, transcript variant X2
80. ENSGALG00000026840 ENSGALG00000026840 1 1 - - 1.000 - - - - - - -
81. ENTPD2 ENSGALG00000039696 3 1 - - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
82. SLC14A2 SLC14A2 4 1 - - 1.000 - - - - - - -
83. SLC5A12 ENSGALG00000013304 1 1 - - 1.000 - - - - - - - solute carrier family 5 member 12 [Source:HGNC Symbol;Acc:HGNC:28750]
84. TMPRSS7 ENSGALG00000015389 12 0.981 - - - - - - - - - 0.981 transmembrane serine protease 7 [Source:HGNC Symbol;Acc:HGNC:30846]
85. CD200L ENSGALG00000015395 14 0.964 - - - - - - - - - 0.964 CD200 molecule-like [Source:NCBI gene;Acc:418424]
86. AHRR ENSGALG00000013402 2 0.935 - - 0.935 - - - - - - - aryl-hydrocarbon receptor repressor [Source:NCBI gene;Acc:420989]
87. SNORA50 SNORA50 9 0.924 - - 0.924 - - - - - - -
88. EVPL ENSGALG00000002108 591 0.917 - - - - - - - - - 0.917 envoplakin
89. DYTN ENSGALG00000008562 2 0.917 - - 0.917 - - - - - - - dystrotelin [Source:HGNC Symbol;Acc:HGNC:23279]
90. TMEM121 ENSGALG00000002756 5 0.917 - - - - - 0.917 - - - - transmembrane protein 121 [Source:NCBI gene;Acc:395216]
91. ENSGALG00000010222 ENSGALG00000010222 4 0.897 - - 0.897 - - - - - - -
92. UPK3B 4 0.873 - - - - - - - - - 0.873 uroplakin 3B
93. MYBPC3 ENSGALG00000008148 315 0.867 - - 0.867 - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
94. gga-mir-6569 ENSGALG00000026551 10 0.861 - - - - - - - - - 0.861 gga-mir-6569 [Source:miRBase;Acc:MI0022387]
95. GHRH ENSGALG00000003842 30 0.856 - - 0.856 - - - - - - - growth hormone releasing hormone [Source:NCBI gene;Acc:419178]
96. PDCL ENSGALG00000001275 24 0.855 - - - - - 0.855 - - - - phosducin like [Source:HGNC Symbol;Acc:HGNC:8770]
97. TLL2 ENSGALG00000005519 10 0.837 - - - - - - - - - 0.837 tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
98. CCDC122 ENSGALG00000016968 5 0.837 - - - - - - - - - 0.837 coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
99. LOC427545 ENSGALG00000004428 3 0.837 - - - - - - - - - 0.837 histamine H3 receptor-like
100. ENSGALG00000012217 ENSGALG00000012217 8 0.837 - - - - - - - - - 0.837

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA