Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GDE1

Gene Name Gene ID Reads Annotation
GDE1 ENSGALG00000006916 1040 glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]











Genes with expression patterns similar to GDE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GDE1 ENSGALG00000006916 1040 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]
2. ZMYM2 ENSGALG00000017139 3747 1.472 - - - - - 0.702 - - 0.770 - zinc finger MYM-type containing 2, transcript variant X10
3. DERA ENSGALG00000013095 4135 1.429 - - - - - 0.716 0.713 - - - deoxyribose-phosphate aldolase [Source:NCBI gene;Acc:418176]
4. SERPINB1 ENSGALG00000019555 29 0.941 - - - - - 0.941 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
5. SMOC2 ENSGALG00000011205 340 0.927 - - - - - 0.927 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
6. ENSGALG00000014545 ENSGALG00000014545 285 0.916 - - - - - 0.916 - - - -
7. LOC415478 ENSGALG00000021171 100 0.914 - - - - - 0.914 - - - - transmembrane protein 2-like, transcript variant X2
8. ZNF236 ENSGALG00000013657 154 0.907 - - - - - 0.907 - - - - zinc finger protein 236 [Source:HGNC Symbol;Acc:HGNC:13028]
9. POLB ENSGALG00000040828 7462 0.905 - - - - - 0.905 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
10. SERPINF2 ENSGALG00000002987 236 0.902 - - - - - 0.902 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
11. E4F1 ENSGALG00000005900 1814 0.897 - - - - - 0.897 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
12. PRKDC ENSGALG00000042469 449 0.893 - - - - - 0.893 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
13. ADNP2 ENSGALG00000035669 318 0.893 - - - - - 0.893 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
14. ELAVL1 ENSGALG00000000726 718 0.892 - - - - - 0.892 - - - - ELAV like RNA binding protein 1 [Source:NCBI gene;Acc:395637]
15. KIF7 ENSGALG00000006611 33 0.891 - - - - - 0.891 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
16. OLFML1 ENSGALG00000027184 19 0.891 - - - - - 0.891 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
17. SH2D1B ENSGALG00000028448 17 0.89 - - - - - 0.890 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
18. POT1 ENSGALG00000008740 947 0.889 - - - - - 0.889 - - - - protection of telomeres 1 [Source:NCBI gene;Acc:404538]
19. HJURP ENSGALG00000015363 54 0.889 - - - - - 0.889 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
20. SCAF8 ENSGALG00000013635 421 0.888 - - - - - 0.888 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
21. GPD1L2 ENSGALG00000012061 31 0.888 - - - - - 0.888 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
22. RAC3 ENSGALG00000040606 355 0.886 - - - - - 0.886 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
23. PTCH1 ENSGALG00000012620 4840 0.885 - - - - - 0.885 - - - - patched 1 [Source:NCBI gene;Acc:395806]
24. DRD4 ENSGALG00000040761 79 0.885 - - - - - 0.885 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
25. C1orf168 C1orf168 98 0.885 - - - - - 0.885 - - - -
26. MCC ENSGALG00000000208 61 0.882 - - - - - 0.882 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
27. GMEB1 ENSGALG00000038488 158 0.879 - - - - - 0.879 - - - - glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]
28. ENSGALG00000002946 ENSGALG00000002946 56 0.879 - - - - - 0.879 - - - -
29. AQP1 ENSGALG00000005209 111 0.878 - - - - - 0.878 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
30. LOC419851 ENSGALG00000023953 80 0.875 - - - - - 0.875 - - - - complement component 4 binding protein, alpha chain
31. FAM175B 3194 0.875 - - - - - 0.875 - - - - family with sequence similarity 175 member B, transcript variant X2
32. NIPAL4 ENSGALG00000039687 29 0.874 - - - - - 0.874 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
33. BLVRA ENSGALG00000031786 23 0.873 - - - - - 0.873 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
34. PACSIN2 ENSGALG00000014159 601 0.873 - - - - - 0.873 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
35. ELMSAN1 ENSGALG00000009282 79 0.87 - - - - - 0.870 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
36. RASL11B ENSGALG00000013948 201 0.869 - - - - - 0.869 - - - - RAS like family 11 member B [Source:HGNC Symbol;Acc:HGNC:23804]
37. DSEL ENSGALG00000042505 92 0.868 - - - - - 0.868 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
38. KLHL40 ENSGALG00000005292 61 0.867 - - - - - 0.867 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
39. CADPS2 ENSGALG00000008926 398 0.864 - - - - - 0.864 - - - - calcium dependent secretion activator 2 [Source:HGNC Symbol;Acc:HGNC:16018]
40. MXRA5 ENSGALG00000016635 352 0.863 - - - - - 0.863 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
41. FAM177A1 ENSGALG00000010046 4318 0.863 - - - - - 0.863 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
42. EVC2 ENSGALG00000015029 51 0.863 - - - - - 0.863 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
43. CLASP1 ENSGALG00000011645 1378 0.862 - - - - - 0.862 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
44. GTF3C4 ENSGALG00000031016 1221 0.862 - - - - - 0.862 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
45. C9orf96 C9orf96 43 0.862 - - - - - 0.862 - - - -
46. COBL ENSGALG00000013102 84 0.861 - - - - - 0.861 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
47. GOLGA1 ENSGALG00000001025 334 0.861 - - - - - 0.861 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
48. LEMD3 ENSGALG00000009873 347 0.861 - - - - - 0.861 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
49. ABCC3 ENSGALG00000007522 340 0.861 - - - - - 0.861 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
50. CRCP ENSGALG00000002587 8809 0.86 - - - - - 0.860 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
51. DBT ENSGALG00000005280 2893 0.859 - - - - - 0.859 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
52. PRKAR1A ENSGALG00000004237 4785 0.857 - - - - - 0.857 - - - - protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
53. ASCC3 ENSGALG00000015465 259 0.856 - - - - - 0.856 - - - - activating signal cointegrator 1 complex subunit 3 [Source:NCBI gene;Acc:421790]
54. LTC4SL ENSGALG00000011450 645 0.856 - - - - - 0.856 - - - - leukotriene C4 synthase-like, transcript variant X3
55. WHAMM ENSGALG00000006002 1678 0.856 - - - - - 0.856 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
56. TTC7A ENSGALG00000010020 793 0.855 - - - - - 0.855 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
57. ENSGALG00000004127 ENSGALG00000004127 566 0.854 - - - - - 0.854 - - - -
58. JAKMIP2 ENSGALG00000007593 95 0.852 - - - - - 0.852 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
59. NAIF1 ENSGALG00000027734 1551 0.852 - - - - - 0.852 - - - - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
60. FGF7 ENSGALG00000028158 189 0.848 - - - - - 0.848 - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
61. TPCN3 ENSGALG00000008198 124 0.848 - - - - - 0.848 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
62. ENSGALG00000026461 ENSGALG00000026461 61 0.845 - - - - - 0.845 - - - -
63. CCDC171 ENSGALG00000015103 349 0.845 - - - - - 0.845 - - - - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
64. PON2 ENSGALG00000009689 1416 0.844 - - - - - 0.844 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
65. GYPC ENSGALG00000011566 99 0.844 - - - - - 0.844 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
66. SMCHD1 ENSGALG00000014811 730 0.844 - - - - - 0.844 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29090]
67. TEAD4 ENSGALG00000014342 6123 0.841 - - - - - 0.841 - - - - Gallus gallus TEA domain transcription factor 4 (TEAD4), transcript variant 7, mRNA. [Source:RefSeq mRNA;Acc:NM_001359859]
68. ACN9 ACN9 269 0.84 - - - - - 0.840 - - - -
69. WARS ENSGALG00000011228 193 0.84 - - - - - 0.840 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
70. DSL1 DSL1 113 0.84 - - - - - 0.840 - - - -
71. EIF2AK4 ENSGALG00000009611 2164 0.839 - - - - - 0.839 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
72. SLC30A6 ENSGALG00000010618 3197 0.836 - - - - - 0.836 - - - - solute carrier family 30 member 6 [Source:NCBI gene;Acc:421480]
73. HOOK3 ENSGALG00000015390 992 0.836 - - - - - 0.836 - - - - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
74. DIAPH3 ENSGALG00000016937 1069 0.836 - - - - - 0.836 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
75. SPSB3 ENSGALG00000002285 1329 0.832 - - - - - 0.832 - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
76. TERF1 ENSGALG00000037453 4497 0.832 - - - - - 0.832 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
77. TRMT10C ENSGALG00000015328 1939 0.831 - - - - - 0.831 - - - - tRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]
78. COX7C ENSGALG00000027963 84312 0.828 - - - - - 0.828 - - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
79. gga-mir-7474 ENSGALG00000033766 5727 0.827 - - - - - 0.827 - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
80. TCTE3 ENSGALG00000011189 106 0.827 - - - - - 0.827 - - - - t-complex-associated-testis-expressed 3 [Source:HGNC Symbol;Acc:HGNC:11695]
81. APLF ENSGALG00000008745 887 0.827 - - - - - 0.827 - - - - aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
82. PCSK5 ENSGALG00000033256 674 0.825 - - - - - 0.825 - - - - proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:HGNC:8747]
83. FGD4 ENSGALG00000012932 50 0.825 - - - - - 0.825 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
84. C19H17ORF85 C19H17ORF85 2538 0.824 - - - - - 0.824 - - - -
85. SLC9A9 ENSGALG00000002374 179 0.822 - - - - - 0.822 - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
86. CDKL2 ENSGALG00000010119 673 0.82 - - - - - 0.820 - - - - cyclin dependent kinase like 2 [Source:HGNC Symbol;Acc:HGNC:1782]
87. CBX8 ENSGALG00000026548 1063 0.82 - - - - - 0.820 - - - - chromobox 8 [Source:HGNC Symbol;Acc:HGNC:15962]
88. ORMDL3 ENSGALG00000029142 165 0.816 - - - - - 0.816 - - - - ORMDL sphingolipid biosynthesis regulator 3 [Source:HGNC Symbol;Acc:HGNC:16038]
89. GCHFR ENSGALG00000032239 1608 0.815 - - - - - 0.815 - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
90. XPC ENSGALG00000006357 2484 0.814 - - - - - 0.814 - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
91. CDC14A ENSGALG00000005248 502 0.814 - - - - - 0.814 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
92. PNPLA4 ENSGALG00000016618 142 0.811 - - - - - 0.811 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
93. FKBP1B ENSGALG00000016500 117 0.81 - - - - - 0.810 - - - - FK506 binding protein 1B [Source:NCBI gene;Acc:395254]
94. WDR48 ENSGALG00000006052 3575 0.809 - - - - - 0.809 - - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
95. TMEM135 2283 0.809 - - - - - 0.809 - - - - transmembrane protein 135, transcript variant X4
96. ATG10 ENSGALG00000027714 1100 0.809 - - - - - 0.809 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
97. VRK2 ENSGALG00000032770 117 0.807 - - - - - 0.807 - - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
98. ASAP2 ENSGALG00000016419 1393 0.806 - - - - - 0.806 - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
99. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 0.803 - - - - - 0.803 - - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
100. CELF1 ENSGALG00000008097 4717 0.802 - - - - - 0.802 - - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA