Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GBE1

Gene Name Gene ID Reads Annotation
GBE1 ENSGALG00000042771 2323 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]











Genes with expression patterns similar to GBE1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GBE1 ENSGALG00000042771 2323 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
2. ZC3H18 2569 1.649 - - 0.906 - - - 0.743 - - - zinc finger CCCH-type containing 18, transcript variant X3
3. CTBPL ENSGALG00000007642 14238 1.573 - - 0.872 - - - - - 0.701 - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
4. MAEA ENSGALG00000013310 13230 1.559 - - 0.795 - - - - 0.764 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
5. ENSGALG00000001861 ENSGALG00000001861 10150 1.553 - - 0.817 - - - - 0.736 - -
6. PRKACB ENSGALG00000028530 12506 1.551 - - 0.768 - - - - 0.783 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
7. STRN3 ENSGALG00000040464 9045 1.49 - - 0.773 - - - - 0.717 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
8. METTL11A METTL11A 11876 1.485 - - 0.723 - - - - 0.762 - -
9. LARS ENSGALG00000007494 13966 1.472 - - 0.769 - - - - 0.703 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
10. QTRTD1 QTRTD1 10765 1.461 - - 0.751 - - - - 0.710 - -
11. ARHGAP5 ENSGALG00000009992 3485 1.451 - - 0.740 - - - - 0.711 - - Rho GTPase activating protein 5 [Source:HGNC Symbol;Acc:HGNC:675]
12. MKRN1 ENSGALG00000012852 6907 1.434 - - 0.721 - - - - 0.713 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
13. ANXA8 ENSGALG00000005956 479 0.953 - - 0.953 - - - - - - - annexin A8, transcript variant X1
14. CYP27A1 ENSGALG00000002470 321 0.942 - - 0.942 - - - - - - - cytochrome P450 family 27 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2605]
15. FAM171B ENSGALG00000002646 837 0.935 - - 0.935 - - - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
16. SOAT1 ENSGALG00000004205 2394 0.921 - - 0.921 - - - - - - - sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]
17. YWHAQ ENSGALG00000016433 3450 0.915 - - 0.915 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
18. CRCP ENSGALG00000002587 8809 0.913 - - 0.913 - - - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
19. RAB10 ENSGALG00000016535 5272 0.904 - - 0.904 - - - - - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
20. MAP4K3 ENSGALG00000039720 5124 0.897 - - 0.897 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
21. FAM188B 2097 0.897 - - 0.897 - - - - - - - family with sequence similarity 188 member B
22. GTF2IRD1 ENSGALG00000001263 14716 0.88 - - 0.880 - - - - - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
23. EMILIN2 ENSGALG00000032997 2460 0.878 - - 0.878 - - - - - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
24. MAN2B2 ENSGALG00000015537 2267 0.877 - - 0.877 - - - - - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
25. GTF2A1 ENSGALG00000010576 4570 0.875 - - 0.875 - - - - - - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
26. FAT1 ENSGALG00000013579 6030 0.874 - - 0.874 - - - - - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
27. RAD51AP1 ENSGALG00000017290 3807 0.873 - - 0.873 - - - - - - - RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]
28. PPT1 ENSGALG00000003936 2540 0.87 - - 0.870 - - - - - - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
29. MYD88 ENSGALG00000005947 2055 0.87 - - - - - - - 0.870 - - myeloid differentiation primary response 88 [Source:NCBI gene;Acc:420420]
30. RAB34 ENSGALG00000026315 1193 0.869 - - 0.869 - - - - - - - RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
31. SLC9A3R2 ENSGALG00000005608 4220 0.867 - - 0.867 - - - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
32. MAP1B ENSGALG00000014999 6288 0.866 - - 0.866 - - - - - - - microtubule associated protein 1B
33. ADIPOR2 ENSGALG00000035533 6523 0.862 - - 0.862 - - - - - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
34. MRPS34 ENSGALG00000001792 14262 0.859 - - 0.859 - - - - - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
35. ENSGALG00000028164 ENSGALG00000028164 3325 0.859 - - 0.859 - - - - - - -
36. TMEM41B ENSGALG00000005815 2049 0.857 - - 0.857 - - - - - - - transmembrane protein 41B [Source:NCBI gene;Acc:423047]
37. SDAD1 ENSGALG00000011543 5191 0.857 - - 0.857 - - - - - - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
38. ACBD6 ACBD6 4293 0.854 - - 0.854 - - - - - - -
39. CAT ENSGALG00000030187 7534 0.854 - - 0.854 - - - - - - - catalase [Source:NCBI gene;Acc:423600]
40. MYO5A ENSGALG00000031987 2469 0.85 - - 0.850 - - - - - - - myosin VA [Source:NCBI gene;Acc:396237]
41. NFI1 NFI1 6210 0.848 - - 0.848 - - - - - - -
42. SLC25A4 ENSGALG00000010614 9970 0.847 - - 0.847 - - - - - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
43. NXT2 ENSGALG00000008092 2477 0.842 - - 0.842 - - - - - - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
44. IDH1 ENSGALG00000008818 17613 0.841 - - 0.841 - - - - - - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
45. CKB ENSGALG00000011511 2100 0.841 - - 0.841 - - - - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
46. THOC2 ENSGALG00000008507 9501 0.84 - - 0.840 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
47. REST 2394 0.834 - - 0.834 - - - - - - - RE1 silencing transcription factor
48. KPNA2 ENSGALG00000003584 76058 0.831 - - 0.831 - - - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
49. IARS ENSGALG00000004813 12936 0.828 - - - - - - - 0.828 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
50. ROCK1 ENSGALG00000014922 4020 0.825 - - - - - - - 0.825 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
51. BRCC3 ENSGALG00000005383 4844 0.824 - - 0.824 - - - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
52. CREB3L2 ENSGALG00000012877 2515 0.824 - - 0.824 - - - - - - - cAMP responsive element binding protein 3 like 2 [Source:HGNC Symbol;Acc:HGNC:23720]
53. ENSGALG00000012158 ENSGALG00000012158 11937 0.823 - - 0.823 - - - - - - -
54. GHITM ENSGALG00000021262 7159 0.822 - - 0.822 - - - - - - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
55. SENP6 ENSGALG00000015901 8013 0.822 - - 0.822 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
56. OTUD6B ENSGALG00000041337 15657 0.822 - - 0.822 - - - - - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
57. WTAP ENSGALG00000011660 10811 0.819 - - 0.819 - - - - - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
58. MYEOV2 MYEOV2 5155 0.816 - - - - - - - 0.816 - -
59. YBX1 ENSGALG00000004848 20992 0.815 - - 0.815 - - - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
60. SETD1B ENSGALG00000004324 2897 0.815 - - 0.815 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
61. ENSGALG00000004032 ENSGALG00000004032 2010 0.814 - - 0.814 - - - - - - -
62. CTSA ENSGALG00000006876 5380 0.811 - - 0.811 - - - - - - - cathepsin A [Source:NCBI gene;Acc:428163]
63. DHFR ENSGALG00000026757 18478 0.809 - - 0.809 - - - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
64. STK3 ENSGALG00000032850 6339 0.808 - - 0.808 - - - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
65. ELF1 ENSGALG00000016947 2769 0.808 - - - - - - - 0.808 - - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
66. BMS1 ENSGALG00000002624 8339 0.807 - - 0.807 - - - - - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
67. PGS1 ENSGALG00000007181 3187 0.807 - - - - - - 0.807 - - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
68. NIPA2 ENSGALG00000016737 3792 0.805 - - - - - - - 0.805 - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
69. FAM133B 9239 0.802 - - - - - - - 0.802 - - family with sequence similarity 133 member B
70. FNBP1L ENSGALG00000005850 9219 0.802 - - 0.802 - - - - - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
71. HDHD2 ENSGALG00000034801 6373 0.802 - - 0.802 - - - - - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
72. EIF4G3 ENSGALG00000010084 5881 0.799 - - 0.799 - - - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
73. MRPS36 ENSGALG00000014789 7584 0.797 - - 0.797 - - - - - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
74. DAD1 ENSGALG00000035626 32604 0.797 - - - - - - - 0.797 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
75. TAF2 ENSGALG00000043193 6311 0.795 - - - - - - - 0.795 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
76. METTL25 1538 0.793 - - - - - - - 0.793 - - methyltransferase like 25, transcript variant X1
77. TXLNA 6802 0.791 - - 0.791 - - - - - - - taxilin alpha, transcript variant X2
78. BTBD9 ENSGALG00000010131 1870 0.79 - - - - - - - 0.790 - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
79. SMC4 ENSGALG00000009553 15715 0.79 - - 0.790 - - - - - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
80. VPS41 ENSGALG00000031635 4391 0.79 - - - - - - - 0.790 - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
81. METTL6 ENSGALG00000040665 4467 0.79 - - - - - - 0.790 - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
82. VMA21 ENSGALG00000009065 6432 0.789 - - 0.789 - - - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
83. RAD18 ENSGALG00000008368 7214 0.788 - - 0.788 - - - - - - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
84. VRK3 2010 0.786 - - - - - - - 0.786 - - vaccinia related kinase 3, transcript variant X3
85. LRRFIP2 ENSGALG00000033102 8250 0.785 - - - - - - 0.785 - - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
86. GTF2H5 ENSGALG00000013733 12293 0.784 - - 0.784 - - - - - - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
87. MRPS35 ENSGALG00000036730 6327 0.783 - - 0.783 - - - - - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
88. UQCRC1 ENSGALG00000005789 23201 0.782 - - 0.782 - - - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
89. C11H16ORF80 C11H16ORF80 18673 0.782 - - - - - - - 0.782 - -
90. CCNC ENSGALG00000015471 6497 0.781 - - - - - - - 0.781 - - cyclin C [Source:NCBI gene;Acc:421791]
91. ST5 6869 0.78 - - 0.780 - - - - - - - suppression of tumorigenicity 5, transcript variant X1
92. PCF11 ENSGALG00000017249 4714 0.779 - - - - - - - 0.779 - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
93. ZCCHC10 ENSGALG00000036666 5148 0.779 - - 0.779 - - - - - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
94. EMC3 ENSGALG00000003738 10363 0.777 - - - - - - - 0.777 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
95. DCAF12 ENSGALG00000005800 6419 0.776 - - 0.776 - - - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
96. TOR1AIP1 ENSGALG00000029238 5843 0.775 - - 0.775 - - - - - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
97. SLC38A2 ENSGALG00000008497 3894 0.774 - - - - - - - 0.774 - - solute carrier family 38 member 2 [Source:NCBI gene;Acc:417807]
98. NUP214 ENSGALG00000041111 4902 0.773 - - - - - - - 0.773 - - nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
99. TMEM138 ENSGALG00000029480 11268 0.773 - - - - - - - 0.773 - - transmembrane protein 138 [Source:NCBI gene;Acc:426323]
100. HNRNPLL ENSGALG00000008504 14719 0.773 - - 0.773 - - - - - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]

There are 257 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA