Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GBE

Gene Name Gene ID Reads Annotation
GBE ENSGALG00000011859, ENSGALG00000028016 2 eye-globin, transcript variant X3











Genes with expression patterns similar to GBE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GBE ENSGALG00000011859, ENSGALG00000028016 2 2 - - 1.000 - - 1.000 - - - - eye-globin, transcript variant X3
2. VPS37D 3 1.878 - - 0.878 - - 1.000 - - - - VPS37D, ESCRT-I subunit
3. HID1 ENSGALG00000007808 2 1 - - - - - 1.000 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
4. BAFF BAFF 40 1 - - - - - 1.000 - - - -
5. ENSGALG00000028116 ENSGALG00000028116 0 1 - - - - - 1.000 - - - -
6. FARP2 ENSGALG00000005788 6 1 - - - - - 1.000 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
7. GTF3C3 ENSGALG00000007958 6 1 - - - - - 1.000 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
8. RPS6KA2 ENSGALG00000011473 2 1 - - - - - 1.000 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
9. MAGI1 ENSGALG00000007431 23 1 - - - - - 1.000 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
10. CORO6 ENSGALG00000028949 21 1 - - - - - 1.000 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
11. CBL ENSGALG00000029077 6 1 - - - - - 1.000 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
12. DNMBP ENSGALG00000007304 4 1 - - - - - 1.000 - - - - dynamin binding protein
13. MINPP1 ENSGALG00000003695 1 1 - - - - - 1.000 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
14. ENPP4 ENSGALG00000016708 18 1 - - - - - 1.000 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
15. MAVS ENSGALG00000040428 1 1 - - - - - 1.000 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
16. gga-mir-301a ENSGALG00000029989 5 1 - - - - - 1.000 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
17. OVST_1 ENSGALG00000011930 9 1 - - - - - 1.000 - - - - ovostatin [Source:NCBI gene;Acc:396151]
18. LPP ENSGALG00000007337 18 1 - - - - - 1.000 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
19. DSCAML1 ENSGALG00000007314 1 1 - - - - - 1.000 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
20. ENSGALG00000013409 ENSGALG00000013409 4 1 - - - - - 1.000 - - - -
21. AGRP ENSGALG00000002244 27 1 - - - - - 1.000 - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
22. SNORA24 SNORA24 2 1 - - - - - 1.000 - - - -
23. PABPN1L ENSGALG00000006242 3 1 - - - - - 1.000 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
24. C17orf105 C17orf105 11 1 - - - - - 1.000 - - - -
25. gga-mir-10a ENSGALG00000021952 4 1 - - - - - 1.000 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
26. GAMT ENSGALG00000040182 5 1 - - - - - 1.000 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
27. FKHR FKHR 1 1 - - - - - 1.000 - - - -
28. SOD3 ENSGALG00000018557 16 1 - - - - - 1.000 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
29. TRIM25 ENSGALG00000003144 12 1 - - - - - 1.000 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
30. ERI3 ENSGALG00000010106 995 1 - - - - - 1.000 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
31. AATK ENSGALG00000006901 1 1 - - - - - 1.000 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
32. SLC26A6 ENSGALG00000026089 3 1 - - - - - 1.000 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
33. MFSD11 ENSGALG00000001777 8 1 - - - - - 1.000 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
34. TBX15 0 1 - - - - - 1.000 - - - - T-box 15
35. AK4 ENSGALG00000011035 9 1 - - - - - 1.000 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
36. MNOC MNOC 1 1 - - - - - 1.000 - - - -
37. STRA8 ENSGALG00000011722 4 1 - - - - - 1.000 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
38. KATNAL2 ENSGALG00000041882 1 1 - - - - - 1.000 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
39. PPM1F ENSGALG00000039121 26 1 - - - - - 1.000 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
40. LDB1 ENSGALG00000007641 2 1 - - - - - 1.000 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
41. NME4 ENSGALG00000002688 1 1 - - - - - 1.000 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
42. TMEM189 ENSGALG00000026906 14 1 - - - - - 1.000 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
43. WDR41 ENSGALG00000004350 16 1 - - - - - 1.000 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
44. WFDC2 ENSGALG00000031164 37 1 - - - - - 1.000 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
45. RNF217 ENSGALG00000013651 1 1 - - - - - 1.000 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
46. SEC16A ENSGALG00000002364 19 1 - - - - - 1.000 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
47. PTPN3 ENSGALG00000022909 6 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
48. TMEM163 ENSGALG00000012190 72 1 - - - - - 1.000 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
49. RHBDF2 ENSGALG00000001943 1 1 - - - - - 1.000 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
50. PRKG2 ENSGALG00000010909 1 1 - - - - - 1.000 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
51. ENSGALG00000013079 ENSGALG00000013079 12 1 - - - - - 1.000 - - - -
52. MFSD6 ENSGALG00000041884 1 1 - - - - - 1.000 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
53. C1H7ORF60 C1H7ORF60 3 1 - - - - - 1.000 - - - -
54. FAM160A2 ENSGALG00000003416 23 1 - - - - - 1.000 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
55. PITPNC1L ENSGALG00000002610 3 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
56. SNX8 ENSGALG00000004255 4 1 - - - - - 1.000 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
57. AFTPH ENSGALG00000008828 21 1 - - - - - 1.000 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
58. PPP1R1B ENSGALG00000044406 6 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
59. ARHGEF17 6 1 - - - - - 1.000 - - - - Rho guanine nucleotide exchange factor 17
60. PPP1R12B ENSGALG00000000336 16 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory subunit 12B [Source:NCBI gene;Acc:395478]
61. F-KER ENSGALG00000028706 0 1 - - - - - 1.000 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
62. CARF ENSGALG00000008474 6 1 - - - - - 1.000 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
63. SP-A SP-A 9 1 - - - - - 1.000 - - - -
64. ENSGALG00000021682 ENSGALG00000021682 0 1 - - - - - 1.000 - - - -
65. PSTPIP1 ENSGALG00000002786 9 1 - - - - - 1.000 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
66. STX3 ENSGALG00000035153 1 1 - - - - - 1.000 - - - - syntaxin 3
67. PLD5 ENSGALG00000010737 5 1 - - - - - 1.000 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
68. ZNRF2 ENSGALG00000031163 0 1 - - - - - 1.000 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
69. VSTM2A ENSGALG00000041764 2 1 - - - - - 1.000 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
70. PARP3 ENSGALG00000004517 331 0.975 - - - - - 0.975 - - - - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
71. MAP3K14 ENSGALG00000000685 57 0.972 - - - - - 0.972 - - - - mitogen-activated protein kinase kinase kinase 14 [Source:NCBI gene;Acc:419964]
72. SST ENSGALG00000007361 1383 0.962 - - - - - 0.962 - - - - somatostatin [Source:NCBI gene;Acc:396279]
73. MAP2K3 ENSGALG00000041285 27 0.935 - - - - - 0.935 - - - - mitogen-activated protein kinase kinase 3 [Source:NCBI gene;Acc:416496]
74. DCP1A 22 0.926 - - 0.926 - - - - - - - decapping mRNA 1A, transcript variant X3
75. SLC15A5 ENSGALG00000013097 213 0.922 - - - - - 0.922 - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
76. TUBE1 ENSGALG00000015017 39 0.905 - - - - - 0.905 - - - - tubulin epsilon 1, transcript variant X1
77. COL9A2 ENSGALG00000027526 4685 0.885 - - - - - 0.885 - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
78. uc_5 uc_5 1 0.878 - - 0.878 - - - - - - -
79. CELF5 ENSGALG00000026716 2 0.878 - - 0.878 - - - - - - - CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
80. ENSGALG00000024319 ENSGALG00000024319 2 0.878 - - 0.878 - - - - - - -
81. BIRC7 ENSGALG00000005762 1 0.878 - - 0.878 - - - - - - - baculoviral IAP repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:13702]
82. KCNT1 ENSGALG00000001645 1 0.878 - - 0.878 - - - - - - - potassium sodium-activated channel subfamily T member 1 [Source:NCBI gene;Acc:395248]
83. SRPK3 SRPK3 2 0.878 - - 0.878 - - - - - - -
84. ZDHHC1 ENSGALG00000002091 3 0.878 - - 0.878 - - - - - - - zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
85. ENSGALG00000020781 ENSGALG00000020781 5 0.878 - - 0.878 - - - - - - -
86. TMEM71 ENSGALG00000044996 4 0.878 - - 0.878 - - - - - - - transmembrane protein 71 [Source:HGNC Symbol;Acc:HGNC:26572]
87. GAL9 GAL9 1 0.878 - - 0.878 - - - - - - -
88. CHRM3 6 0.878 - - 0.878 - - - - - - - cholinergic receptor muscarinic 3
89. FBXL20 ENSGALG00000001682 2 0.878 - - 0.878 - - - - - - - F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]
90. ENSGALG00000026785 ENSGALG00000026785 1 0.878 - - 0.878 - - - - - - -
91. CNDP1 ENSGALG00000013697 7 0.878 - - 0.878 - - - - - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
92. ENSGALG00000003444 ENSGALG00000003444 1 0.878 - - 0.878 - - - - - - -
93. PDCL ENSGALG00000001275 24 0.876 - - - - - 0.876 - - - - phosducin like [Source:HGNC Symbol;Acc:HGNC:8770]
94. DNASE2 DNASE2 58 0.872 - - - - - 0.872 - - - -
95. LEFTY2 ENSGALG00000009256 1 0.871 - - - - - 0.871 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
96. PTH3R PTH3R 214 0.871 - - - - - 0.871 - - - -
97. ARSH ENSGALG00000016636 34 0.848 - - 0.848 - - - - - - - arylsulfatase family, member H [Source:NCBI gene;Acc:378798]
98. UTS2RL ENSGALG00000012419 118 0.845 - - - - - 0.845 - - - - urotensin-2 receptor-like
99. PTPRR ENSGALG00000010148 93 0.837 - - - - - 0.837 - - - - protein tyrosine phosphatase, receptor type R, transcript variant X4
100. SCARA5 ENSGALG00000016580 712 0.836 - - - - - 0.836 - - - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]

There are 48 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA