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Results for GBAS

Gene Name Gene ID Reads Annotation
GBAS 18453 glioblastoma amplified sequence











Genes with expression patterns similar to GBAS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GBAS 18453 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glioblastoma amplified sequence
2. TLK2 ENSGALG00000000410 4690 2.646 - - 0.886 - 0.937 - - 0.823 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
3. IGDCC4 ENSGALG00000007410 5457 2.359 - - 0.701 - 0.939 - 0.719 - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
4. PNRC2 ENSGALG00000004122 19228 1.788 - - - - 0.927 - 0.861 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
5. KPNA3 ENSGALG00000017009 17330 1.759 - - - - 0.933 - 0.826 - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
6. PUM1 ENSGALG00000042598 9392 1.759 - - - - 0.934 - - 0.825 - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
7. AATF ENSGALG00000005420 6501 1.738 - - - - 0.939 - - 0.799 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
8. ENSGALG00000014852 ENSGALG00000014852 15288 1.726 - - 0.789 - 0.937 - - - - -
9. MRPS27 ENSGALG00000015002 6541 1.718 - - 0.790 - 0.928 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
10. C19H17ORF85 C19H17ORF85 2538 1.678 - - 0.925 - - 0.753 - - - -
11. ATG10 ENSGALG00000027714 1100 1.673 - - 0.896 - - 0.777 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
12. REEP5 ENSGALG00000023157 6282 1.672 - - 0.734 - 0.938 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
13. MELK ENSGALG00000016438 9237 1.657 - - 0.811 - - - 0.846 - - - maternal embryonic leucine zipper kinase [Source:NCBI gene;Acc:428391]
14. PCBP4 ENSGALG00000027695 7937 1.642 - - 0.706 - 0.936 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
15. KIAA1324L ENSGALG00000030324 1695 1.638 - - - - - 0.820 - 0.818 - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
16. PON2 ENSGALG00000009689 1416 1.638 - - 0.843 - - 0.795 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
17. DDX18 ENSGALG00000012147 12463 1.629 - - 0.874 - 0.755 - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
18. TOP2B ENSGALG00000011300 25048 1.624 - - 0.709 - - - - 0.915 - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
19. ATP5F1 80590 1.605 - - 0.869 - - - 0.736 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
20. TRIP12 ENSGALG00000002929 11713 1.603 - - 0.872 - - - 0.731 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
21. BTAF1 ENSGALG00000030598 3556 1.596 - - 0.862 - - 0.734 - - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
22. BUD31 ENSGALG00000004705 19474 1.574 - - - - - 0.712 0.862 - - - BUD31 homolog [Source:HGNC Symbol;Acc:HGNC:29629]
23. XPC ENSGALG00000006357 2484 1.559 - - 0.784 - - 0.775 - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
24. PPP1R21 ENSGALG00000008937 2343 1.554 - - - - - 0.736 - 0.818 - - protein phosphatase 1 regulatory subunit 21 [Source:NCBI gene;Acc:421287]
25. AXIN1 ENSGALG00000029402 2802 1.533 - - 0.833 - - 0.700 - - - - axin 1 [Source:NCBI gene;Acc:395786]
26. SLU7 ENSGALG00000034414 5386 1.531 - - 0.804 - - - 0.727 - - - SLU7 homolog, splicing factor [Source:NCBI gene;Acc:416157]
27. C5H14ORF166 C5H14ORF166 24176 1.531 - - 0.814 - - - 0.717 - - -
28. CPSF6 ENSGALG00000019355 7634 1.513 - - - - - - 0.709 0.804 - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
29. EIF3E ENSGALG00000037067 36561 1.508 - - - - 0.724 0.784 - - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
30. RBM19 ENSGALG00000008289 10702 1.493 - - 0.782 - - - 0.711 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
31. BLMH ENSGALG00000004259 36907 1.491 - - - - 0.742 - 0.749 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
32. PITPNB ENSGALG00000005654 21578 1.484 - - - - - - 0.758 0.726 - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
33. PARN ENSGALG00000003091 6363 1.449 - - - - - 0.704 0.745 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
34. ENSGALG00000012158 ENSGALG00000012158 11937 1.449 - - 0.726 - - - 0.723 - - -
35. RIT1 ENSGALG00000014647 7174 1.434 - - 0.725 - - - 0.709 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
36. RFC3 ENSGALG00000017064 7011 1.427 - - 0.720 - - - 0.707 - - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
37. PABPC1 ENSGALG00000030280 23934 0.978 - - - - - - - 0.978 - - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
38. RPL24 ENSGALG00000015339 227460 0.956 - - - - 0.956 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
39. NAA25 ENSGALG00000041821 12729 0.953 - - - - 0.953 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
40. MRPS25 ENSGALG00000008506 12131 0.949 - - - - 0.949 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
41. NOP58 ENSGALG00000008454 34630 0.945 - - - - 0.945 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
42. STRAP ENSGALG00000013092 13100 0.945 - - - - 0.945 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
43. POLR2B ENSGALG00000011387 4864 0.944 - - - - 0.944 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
44. TBCA ENSGALG00000004353 18510 0.944 - - - - 0.944 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
45. IGBP1 ENSGALG00000044628 9200 0.943 - - - - 0.943 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
46. MKI67 ENSGALG00000025996 28136 0.942 - - - - 0.942 - - - - - marker of proliferation Ki-67, transcript variant X3
47. OLA1 ENSGALG00000009325 26414 0.94 - - - - 0.940 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
48. PTTG1 17936 0.939 - - - - 0.939 - - - - - pituitary tumor-transforming 1, transcript variant X1
49. SHROOM2 ENSGALG00000030802 4517 0.938 - - - - 0.938 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
50. STK3 ENSGALG00000032850 6339 0.937 - - - - 0.937 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
51. PLAA ENSGALG00000001782 5459 0.937 - - - - 0.937 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
52. CSNK1G1 ENSGALG00000030812 31618 0.937 - - - - 0.937 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
53. CCT4 ENSGALG00000008812 78267 0.936 - - - - 0.936 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
54. MRPL23 ENSGALG00000006561 13737 0.936 - - - - 0.936 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
55. C20H20ORF24 ENSGALG00000001054 22026 0.936 - - - - 0.936 - - - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
56. SAR1B ENSGALG00000038753 6493 0.934 - - - - 0.934 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
57. ATG5 ENSGALG00000015387 7752 0.933 - - - - 0.933 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
58. PSMC2 ENSGALG00000008236 25980 0.933 - - - - 0.933 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
59. KNOP1 ENSGALG00000002042 6251 0.932 - - - - 0.932 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
60. FH ENSGALG00000013165 13669 0.932 - - - - 0.932 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
61. PSPC1 ENSGALG00000017142 13036 0.931 - - - - 0.931 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
62. RABEP1 ENSGALG00000001737 2650 0.931 - - - - 0.931 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
63. COIL ENSGALG00000003158 7806 0.931 - - - - 0.931 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
64. SH2D3C ENSGALG00000005036 5101 0.931 - - - - 0.931 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
65. CBWD1 ENSGALG00000010147 2765 0.93 - - - - 0.930 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
66. DNAJC12 ENSGALG00000002769 1418 0.93 - - - - 0.930 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
67. TRAPPC12 ENSGALG00000016387 2593 0.93 - - - - 0.930 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
68. CZH9ORF41 CZH9ORF41 3492 0.93 - - - - 0.930 - - - - -
69. ZBTB10 ENSGALG00000034376 3271 0.929 - - - - 0.929 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
70. YY1 ENSGALG00000017388 1933 0.929 - - - - 0.929 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
71. SIRT1 ENSGALG00000002761 9028 0.929 - - - - 0.929 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
72. ENSGALG00000011687 ENSGALG00000011687 4553 0.928 - - - - 0.928 - - - - -
73. COMMD8 ENSGALG00000026279 13509 0.928 - - - - 0.928 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
74. EXO1 ENSGALG00000010748 7572 0.928 - - - - 0.928 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
75. SSR2 ENSGALG00000000764 32190 0.928 - - - - 0.928 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
76. TRIM45 ENSGALG00000014818 1258 0.927 - - 0.927 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
77. XPO7 ENSGALG00000001838 1875 0.927 - - - - 0.927 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
78. ELL2 ENSGALG00000014678 1111 0.927 - - - - 0.927 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
79. EAPP ENSGALG00000010007 5080 0.927 - - - - 0.927 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
80. RANGAP1 ENSGALG00000011966 20170 0.927 - - - - 0.927 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
81. WDR82 ENSGALG00000025904 4783 0.927 - - - - 0.927 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
82. FBXO9 ENSGALG00000016320 9600 0.927 - - - - 0.927 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
83. C8H1ORF52 C8H1ORF52 118 0.926 - - 0.926 - - - - - - -
84. CTSZ ENSGALG00000007462 630 0.926 - - - - 0.926 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
85. REST 2394 0.926 - - - - 0.926 - - - - - RE1 silencing transcription factor
86. SSPN ENSGALG00000014042 638 0.926 - - - - 0.926 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
87. TCP11L1 ENSGALG00000011688 2427 0.926 - - - - 0.926 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
88. SFSWAP ENSGALG00000002487 9977 0.925 - - - - 0.925 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
89. DDX55 ENSGALG00000003298 2315 0.925 - - - - 0.925 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
90. NFASC ENSGALG00000031776 4264 0.925 - - - - 0.925 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
91. IGF1R ENSGALG00000040651 772 0.925 - - - - 0.925 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
92. BAG4 ENSGALG00000003254 5751 0.924 - - - - 0.924 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
93. SDCBP ENSGALG00000015436 1228 0.924 - - 0.924 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
94. MAK16 ENSGALG00000001663 7455 0.924 - - 0.924 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
95. NAP1L1 ENSGALG00000010238 14506 0.924 - - - - 0.924 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
96. CDC42SE2 ENSGALG00000027258 4725 0.923 - - - - 0.923 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
97. TK2 ENSGALG00000034216 5394 0.922 - - - - 0.922 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
98. TLCD1 ENSGALG00000003973 17569 0.922 - - - - 0.922 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
99. YME1L1 ENSGALG00000007492 8652 0.921 - - - - - - 0.921 - - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
100. Sep-02 Sep-02 206 0.921 - - 0.921 - - - - - - -

There are 777 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA