Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GATC

Gene Name Gene ID Reads Annotation
GATC ENSGALG00000007195 8610 glutamyl-tRNA amidotransferase subunit C, transcript variant X2











Genes with expression patterns similar to GATC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GATC ENSGALG00000007195 8610 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 glutamyl-tRNA amidotransferase subunit C, transcript variant X2
2. GNL2 ENSGALG00000001973 10148 1.973 - - - - - - 0.992 0.981 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
3. PSMC1 ENSGALG00000010675 20633 1.927 - - - - 0.937 - 0.990 - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
4. MYO9A ENSGALG00000033618 4505 1.914 - - - - 0.950 - - 0.964 - - myosin IXA, transcript variant X10
5. SPEN ENSGALG00000036932 9688 1.782 - - - - 0.943 - - 0.839 - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
6. DNAJC9 ENSGALG00000002701 19249 1.763 - - - - 0.929 - - 0.834 - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
7. MRPL21 ENSGALG00000004362 20796 1.673 - - - - 0.914 - - 0.759 - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
8. RPS2 ENSGALG00000005490 293634 1.671 - - - - 0.796 - 0.875 - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
9. USMG5 ENSGALG00000034645 33263 1.669 - - - - 0.884 - - 0.785 - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
10. WDR33 ENSGALG00000002043 6340 1.469 - - - - - - - 0.762 - 0.707 WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
11. AP3D1 ENSGALG00000000996 16143 0.999 - - - - - - 0.999 - - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
12. NCBP1 ENSGALG00000002087 8907 0.997 - - - - - - 0.997 - - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
13. CMIP ENSGALG00000038494 5016 0.997 - - - - - - 0.997 - - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
14. ING4 ENSGALG00000014457 5561 0.996 - - - - - - 0.996 - - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
15. MAD2L1BP ENSGALG00000027871 7835 0.994 - - - - - - 0.994 - - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
16. SNX27 ENSGALG00000040687 3221 0.994 - - - - - - 0.994 - - - sorting nexin family member 27 [Source:NCBI gene;Acc:425666]
17. SAT1 ENSGALG00000016348 8469 0.994 - - - - - - 0.994 - - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
18. NPEPL1 ENSGALG00000007533 5908 0.994 - - - - - - 0.994 - - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
19. ITPK1 ENSGALG00000034898 4212 0.994 - - - - - - 0.994 - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
20. ACAD11 ENSGALG00000035949 5483 0.994 - - - - - - 0.994 - - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
21. MED18 ENSGALG00000028149 2684 0.994 - - - - - - 0.994 - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
22. FURIN ENSGALG00000008341 2609 0.993 - - - - - - 0.993 - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
23. TET3 ENSGALG00000037860 3129 0.993 - - - - - - 0.993 - - - tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:HGNC:28313]
24. ZNF326 ENSGALG00000006113 15141 0.993 - - - - - - 0.993 - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
25. TASP1 ENSGALG00000009057 1295 0.993 - - - - - - 0.993 - - - taspase 1 [Source:NCBI gene;Acc:416741]
26. PRDM15 ENSGALG00000019178 2729 0.993 - - - - - - 0.993 - - - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
27. IDH2 ENSGALG00000034434 18307 0.993 - - - - - - 0.993 - - - isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
28. C9orf78 ENSGALG00000004152 7140 0.993 - - - - - - 0.993 - - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
29. ENSGALG00000029084 ENSGALG00000029084 890 0.993 - - - - - - 0.993 - - -
30. PCDH18 ENSGALG00000009732 6634 0.993 - - - - - - 0.993 - - - protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
31. BLZF1 ENSGALG00000015225 3594 0.993 - - - - - - 0.993 - - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
32. KBTBD4 ENSGALG00000008089 1799 0.993 - - - - - - 0.993 - - - kelch repeat and BTB domain containing 4 [Source:NCBI gene;Acc:423180]
33. E2F1 ENSGALG00000003045 5604 0.993 - - - - - - 0.993 - - - E2F transcription factor 1 [Source:NCBI gene;Acc:396142]
34. DNAJC8 ENSGALG00000000790 19405 0.992 - - - - - - 0.992 - - - DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]
35. MTFR1 ENSGALG00000038385 9419 0.992 - - - - - - 0.992 - - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
36. ENPP2 ENSGALG00000032746 6086 0.992 - - - - - - 0.992 - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
37. EIF6 ENSGALG00000033993 14647 0.992 - - - - - - 0.992 - - - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
38. EIF2AK1 ENSGALG00000003391 3381 0.991 - - - - - - 0.991 - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:NCBI gene;Acc:395360]
39. NOLC1 ENSGALG00000041124 12765 0.991 - - - - - - 0.991 - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
40. SLC25A4 ENSGALG00000010614 9970 0.991 - - - - - - 0.991 - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
41. MRPL35 ENSGALG00000022950 26070 0.99 - - - - - - 0.990 - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
42. RPN1 ENSGALG00000005907 25315 0.989 - - - - - - 0.989 - - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
43. CD2AP ENSGALG00000016720 8852 0.987 - - - - - - 0.987 - - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
44. OTUD6B ENSGALG00000041337 15657 0.986 - - - - - - 0.986 - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
45. CSNK1D ENSGALG00000002719 19530 0.984 - - - - - - 0.984 - - - casein kinase 1 delta [Source:NCBI gene;Acc:417378]
46. C20H20ORF24 ENSGALG00000001054 22026 0.98 - - - - - - 0.980 - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
47. LRWD1 ENSGALG00000001852 13862 0.978 - - - - - - 0.978 - - - leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
48. XPO5 ENSGALG00000010341 24765 0.974 - - - - - - 0.974 - - - exportin 5 [Source:NCBI gene;Acc:421450]
49. HSF2 ENSGALG00000038420 5259 0.974 - - - - 0.974 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
50. TIMMDC1 ENSGALG00000024480 9337 0.973 - - - - 0.973 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
51. CCDC104 CCDC104 6584 0.972 - - - - - - - 0.972 - -
52. COPS8 ENSGALG00000033385 10166 0.972 - - - - - - - 0.972 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
53. TMEM60 ENSGALG00000008330 6303 0.971 - - - - - - - 0.971 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
54. CDKAL1 ENSGALG00000012677 4733 0.971 - - - - - - - 0.971 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
55. EDNRA ENSGALG00000010013 2472 0.971 - - - - 0.971 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
56. SDCBP ENSGALG00000015436 1228 0.971 - - - - 0.971 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
57. WDR92 ENSGALG00000008760 3934 0.97 - - - - 0.970 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
58. MED21 ENSGALG00000027435 5766 0.97 - - - - 0.970 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
59. YARS ENSGALG00000003563 11093 0.97 - - - - 0.970 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
60. HARS ENSGALG00000035080 11602 0.97 - - - - 0.970 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
61. KIF11 ENSGALG00000030597 5528 0.97 - - - - 0.970 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
62. STX2 ENSGALG00000002536 10438 0.969 - - - - - - - 0.969 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
63. LZIC ENSGALG00000002616 9052 0.969 - - - - 0.969 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
64. NKIRAS2 ENSGALG00000028971 3414 0.969 - - - - - - - 0.969 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
65. DCK ENSGALG00000028501 8675 0.968 - - - - - - - 0.968 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
66. ENSGALG00000027854 ENSGALG00000027854 5007 0.968 - - - - 0.968 - - - - -
67. BAHD1 ENSGALG00000033675 1779 0.968 - - - - 0.968 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
68. LOC426385 ENSGALG00000026301 2703 0.968 - - - - 0.968 - - - - - serine/threonine kinase 35-like, transcript variant X2
69. C9orf85 ENSGALG00000026001 4110 0.968 - - - - 0.968 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
70. PREP2 PREP2 238 0.967 - - - - 0.967 - - - - -
71. ANKRD9 ENSGALG00000011376 525 0.967 - - - - 0.967 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
72. SNX14 ENSGALG00000015831 2554 0.967 - - - - 0.967 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
73. PITHD1 ENSGALG00000003986 11470 0.967 - - - - 0.967 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
74. SYNE1 ENSGALG00000013505 2324 0.967 - - - - 0.967 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
75. SLMO2 SLMO2 9207 0.967 - - - - 0.967 - - - - -
76. RALGDS ENSGALG00000003412 4478 0.967 - - - - 0.967 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
77. PTK2B ENSGALG00000016564 406 0.967 - - - - 0.967 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
78. RAMP3 ENSGALG00000037246 1187 0.967 - - - - 0.967 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
79. SMG7 ENSGALG00000004667 707 0.967 - - - - 0.967 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
80. MAGT1 ENSGALG00000007861 9105 0.967 - - - - - - - 0.967 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
81. PRDM4 ENSGALG00000012619 876 0.967 - - - - 0.967 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
82. ZCCHC10 ENSGALG00000036666 5148 0.967 - - - - - - - 0.967 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
83. RBM6 ENSGALG00000035578 1690 0.967 - - - - 0.967 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
84. MTFR2 ENSGALG00000019967 4436 0.966 - - - - - - - 0.966 - - mitochondrial fission regulator 2, transcript variant X1
85. PHTF1 ENSGALG00000001845 3276 0.966 - - - - 0.966 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
86. NDUFV1 ENSGALG00000042809 6222 0.966 - - - - 0.966 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
87. CDKN1B ENSGALG00000022980 4606 0.966 - - - - 0.966 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
88. MRPL32 ENSGALG00000037258 6861 0.966 - - - - - - - 0.966 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
89. TTC37 ENSGALG00000014670 5715 0.966 - - - - - - - 0.966 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
90. TMF1 ENSGALG00000013408 3344 0.966 - - - - 0.966 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
91. MED8 ENSGALG00000009993 3095 0.966 - - - - 0.966 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
92. LGMN ENSGALG00000010811 7401 0.965 - - - - 0.965 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
93. SIRT6 ENSGALG00000001245 3716 0.965 - - - - - - - 0.965 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
94. ACAT2 ENSGALG00000011659 12825 0.965 - - - - 0.965 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
95. DGKZ ENSGALG00000008380 5389 0.965 - - - - 0.965 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
96. GTF2H1 ENSGALG00000042340 1553 0.965 - - - - 0.965 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
97. MRPL16 ENSGALG00000029419 8033 0.965 - - - - 0.965 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
98. BRF1 ENSGALG00000011705 3406 0.965 - - - - 0.965 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
99. HPS4 ENSGALG00000005595 2217 0.964 - - - - - - - 0.964 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
100. DLL1 ENSGALG00000011182 1613 0.964 - - - - 0.964 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]

There are 257 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA