Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for GAP43

Gene Name Gene ID Reads Annotation
GAP43 ENSGALG00000015089 505 growth associated protein 43 [Source:NCBI gene;Acc:427955]











Genes with expression patterns similar to GAP43

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. GAP43 ENSGALG00000015089 505 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 growth associated protein 43 [Source:NCBI gene;Acc:427955]
2. STMN2 ENSGALG00000039690 989 3.402 - - 0.891 - 0.804 - - - 0.818 0.889 stathmin 2 [Source:NCBI gene;Acc:396095]
3. MNR2 ENSGALG00000011349 3340 3.213 - - 0.815 - 0.722 - - - 0.930 0.746 homeodomain protein
4. SYT4 ENSGALG00000042626 384 3.175 - - 0.776 - 0.787 - - - 0.899 0.713 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
5. CDH12 ENSGALG00000012941 223 3.068 - - 0.746 - 0.785 - - 0.728 - 0.809 cadherin 12, transcript variant X8
6. SCML4 ENSGALG00000015309 499 2.673 - - 0.810 - - - - - 0.913 0.950 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
7. EFCAB6 ENSGALG00000014188 139 2.602 - - 0.892 - - - - - 0.786 0.924 EF-hand calcium binding domain 6, transcript variant X3
8. ISL1 ENSGALG00000014884 7666 2.594 - - 0.890 - - - - - 0.876 0.828 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
9. EF1A EF1A 2378 2.574 - - 0.751 - - - - - 0.946 0.877
10. MNX1 ENSGALG00000041154 244 2.546 - - 0.779 - - - - - 0.894 0.873 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
11. NEFL ENSGALG00000000314 4883 2.545 - - 0.725 - - - - - 0.911 0.909 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
12. MYT1 ENSGALG00000005932 2017 2.533 - - 0.780 - - - - - 0.876 0.877 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
13. ECEL1 ENSGALG00000030420 670 2.453 - - 0.712 - - - - - 0.854 0.887 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
14. SNAP25 ENSGALG00000009003 222 2.4 - - 0.717 - - - - - 0.807 0.876 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
15. NKX-6.2 NKX-6.2 1370 2.384 - - 0.792 - 0.786 - - - 0.806 -
16. GPM6A ENSGALG00000043480 2133 2.267 - - 0.748 - - - - - 0.770 0.749 glycoprotein M6A [Source:NCBI gene;Acc:422569]
17. GRM3 ENSGALG00000006576 474 1.82 - - - - - - - - 0.917 0.903 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
18. SIAT8C SIAT8C 178 1.8 - - - - - - - - 0.914 0.886
19. NFASC ENSGALG00000031776 4264 1.767 - - - - - - - - 0.951 0.816 neurofascin [Source:NCBI gene;Acc:419824]
20. SLC5A7 ENSGALG00000016804 93 1.737 - - - - - - - - 0.957 0.780 solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
21. RTN1 ENSGALG00000012006 2438 1.712 - - - - - - - - 0.844 0.868 reticulon 1 [Source:NCBI gene;Acc:378791]
22. UTS2D UTS2D 2246 1.698 - - 0.816 - - - - - - 0.882
23. SLC10A4 ENSGALG00000033908 300 1.688 - - - - - - - - 0.835 0.853 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
24. INA ENSGALG00000028238 208 1.675 - - - - - - - - 0.869 0.806 internexin neuronal intermediate filament protein alpha
25. LRRN2 ENSGALG00000000639 73 1.627 - - - - - - - - 0.892 0.735 leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
26. ASTN1 ENSGALG00000004472 855 1.61 - - - - - - - - 0.775 0.835 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
27. ELAVL4 ENSGALG00000010533 4978 1.597 - - - - - - - - 0.737 0.860 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
28. NSG1 ENSGALG00000015010 5829 1.596 - - - - - - - - 0.810 0.786 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
29. CLVS2 ENSGALG00000014853 22 1.589 - - - - - - - 0.728 - 0.861 clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
30. FABP7 ENSGALG00000038933 6780 1.54 - - - - - - - - 0.748 0.792 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
31. RECQL5 ENSGALG00000002424 16 1.515 - - - 0.799 - 0.716 - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
32. HPCAL1 ENSGALG00000016443 6633 1.419 - - - - - - - - 0.713 0.706 hippocalcin like 1 [Source:NCBI gene;Acc:396161]
33. TRAF2 ENSGALG00000042838 24 1 - - - - - - - 1.000 - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
34. EGR1 ENSGALG00000007669 30 0.991 - - - - - - - 0.991 - - early growth response 1 [Source:NCBI gene;Acc:373931]
35. ATP7A ENSGALG00000007902 116 0.991 - - - - - - - 0.991 - - ATPase copper transporting alpha [Source:HGNC Symbol;Acc:HGNC:869]
36. PCDHA11 58 0.905 - - - - - - - - - 0.905 protocadherin alpha 11
37. RUSC2 ENSGALG00000002371 272 0.891 - - - - - - - - 0.891 - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
38. RPGR ENSGALG00000036284 186 0.888 - - - - - - - 0.888 - - retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
39. ENSGALG00000008157 ENSGALG00000008157 94 0.883 - - - - - - - 0.883 - -
40. EML1 1941 0.871 - - - - - - - - - 0.871 echinoderm microtubule associated protein like 1, transcript variant X11
41. MAP1B ENSGALG00000014999 6288 0.87 - - - - - - - - - 0.870 microtubule associated protein 1B
42. SHISA3 ENSGALG00000026042 1108 0.869 - - 0.869 - - - - - - - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
43. KLHL33 ENSGALG00000027742 18 0.862 - - - 0.862 - - - - - - kelch like family member 33, transcript variant X2
44. MATN2 44 0.857 - - - - - - - 0.857 - - matrilin 2, transcript variant X9
45. CACNG2 ENSGALG00000031977 196 0.854 - - - - - - - - 0.854 - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
46. SNAP91 ENSGALG00000015846 148 0.853 - - - - - - - - - 0.853 synaptosome associated protein 91 [Source:NCBI gene;Acc:428635]
47. OPRL1 ENSGALG00000027965 53 0.846 - - - - - - - - 0.846 - Gallus gallus opioid related nociceptin receptor 1 (OPRL1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318978]
48. NEFM ENSGALG00000000317 6992 0.841 - - - - - - - - - 0.841 neurofilament medium [Source:NCBI gene;Acc:396206]
49. GABRA3 ENSGALG00000007269 985 0.835 - - - - - - - - 0.835 - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
50. SPINK7 SPINK7 254 0.834 - - 0.834 - - - - - - -
51. SEZ6L ENSGALG00000032415 56 0.831 - - - - - - - - 0.831 - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
52. ELOVL4 ENSGALG00000015876 853 0.829 - - - - - - - - 0.829 - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
53. MYT1L ENSGALG00000016384 147 0.828 - - - - - - - - - 0.828 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
54. Sep-03 Sep-03 109 0.817 - - - - - - - - - 0.817
55. HMGCS1 ENSGALG00000014862 2846 0.815 - - - - - - - - 0.815 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
56. GFRA4 ENSGALG00000036589 2733 0.814 - - - - - - - - - 0.814 GDNF family receptor alpha 4 [Source:NCBI gene;Acc:395839]
57. STMN4 ENSGALG00000030929 621 0.813 - - - - - - - - - 0.813 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
58. UCH-L1 UCH-L1 12697 0.813 - - - - - - - - 0.813 -
59. PLPPR1 ENSGALG00000015542 3179 0.812 - - - - - - - - - 0.812 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
60. BRD8 ENSGALG00000037646 100 0.8 - - - 0.800 - - - - - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
61. CHRNG ENSGALG00000007906 19 0.799 - - - 0.799 - - - - - - cholinergic receptor nicotinic gamma subunit [Source:NCBI gene;Acc:429151]
62. BACE1 ENSGALG00000007298 3 0.799 - - - 0.799 - - - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
63. NANOG ENSGALG00000027772 89 0.799 - - - 0.799 - - - - - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
64. CCDC64 CCDC64 2 0.799 - - - 0.799 - - - - - -
65. OLFML2B ENSGALG00000002667 8 0.799 - - - 0.799 - - - - - - olfactomedin like 2B [Source:HGNC Symbol;Acc:HGNC:24558]
66. CORO6 ENSGALG00000028949 21 0.799 - - - 0.799 - - - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
67. SLC6A18 ENSGALG00000013180 6 0.799 - - - 0.799 - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
68. SLC16A6 ENSGALG00000004162 21 0.799 - - - 0.799 - - - - - - solute carrier family 16 member 6 [Source:HGNC Symbol;Acc:HGNC:10927]
69. C11orf89 C11orf89 1 0.799 - - - 0.799 - - - - - -
70. ALCAM ENSGALG00000015348 14283 0.798 - - - - - - - - - 0.798 activated leukocyte cell adhesion molecule [Source:NCBI gene;Acc:396092]
71. C22orf39 ENSGALG00000044654 1364 0.796 - - - 0.796 - - - - - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
72. NACAD 679 0.792 - - - - - - - - - 0.792 NAC alpha domain containing, transcript variant X1
73. FABP5 ENSGALG00000041344 3984 0.792 - - - - - - - - - 0.792 fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
74. HPRTL ENSGALG00000005361 31 0.786 - - - - - - - - - 0.786 hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
75. CXorf36 ENSGALG00000016215 108 0.786 - - - - - - - 0.786 - - chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
76. BRINP2 ENSGALG00000004448 26 0.785 - - - - - - - - - 0.785 BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
77. NPY ENSGALG00000010983 441 0.784 - - - 0.784 - - - - - - neuropeptide Y [Source:NCBI gene;Acc:396464]
78. STMN3 ENSGALG00000006130 151 0.782 - - - - - - - - 0.782 - stathmin 3 [Source:NCBI gene;Acc:419263]
79. TMSB10 TMSB10 518 0.781 - - 0.781 - - - - - - -
80. NGF ENSGALG00000002556 122 0.778 - - - - - - - 0.778 - - nerve growth factor [Source:NCBI gene;Acc:396466]
81. LRIT3 ENSGALG00000026627 6 0.774 - - - 0.774 - - - - - - leucine rich repeat, Ig-like and transmembrane domains 3 [Source:HGNC Symbol;Acc:HGNC:24783]
82. GDI2 ENSGALG00000008169 67151 0.774 - - - - - - - - 0.774 - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
83. HPCAL4 ENSGALG00000003829 75 0.773 - - - - - - 0.773 - - - hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]
84. C3orf33 ENSGALG00000026293 12 0.77 - - - 0.770 - - - - - - chromosome 3 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:26434]
85. TAT ENSGALG00000000893 11 0.769 - - - - - - - 0.769 - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
86. SMG7 ENSGALG00000004667 707 0.768 - - - - - 0.768 - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
87. GNG2 ENSGALG00000027629 9404 0.765 - - - - - - - - 0.765 - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
88. TBC1D30 ENSGALG00000009859 994 0.764 - - - - - - - - 0.764 - TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
89. UNC80 ENSGALG00000041563 15 0.761 - - - - - 0.761 - - - - unc-80 homolog, NALCN activator, transcript variant X3
90. DBX1 ENSGALG00000003965 1432 0.76 - - - 0.760 - - - - - - developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
91. SPIRE2 ENSGALG00000000521 26 0.759 - - 0.759 - - - - - - - spire type actin nucleation factor 2 [Source:HGNC Symbol;Acc:HGNC:30623]
92. KIF1A ENSGALG00000006221 1989 0.757 - - - - - - - - 0.757 - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
93. FAM134B 807 0.755 - - - - - - - - 0.755 - family with sequence similarity 134 member B, transcript variant X3
94. CR1L ENSGALG00000023950 98 0.755 - - - - - 0.755 - - - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
95. TUBB2B ENSGALG00000012821 41535 0.753 - - - - - - - - 0.753 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
96. GDPD5 ENSGALG00000034967 1983 0.753 - - - - - - - - 0.753 - glycerophosphodiester phosphodiesterase domain containing 5 [Source:NCBI gene;Acc:419070]
97. STMN1 ENSGALG00000001475 225354 0.752 - - - - - - - - 0.752 - stathmin 1 [Source:NCBI gene;Acc:396057]
98. CXCR4 ENSGALG00000012357 1320 0.749 - - - - - - - - - 0.749 C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
99. PHACTR3 250 0.743 - - - - - - - - - 0.743 phosphatase and actin regulator 3, transcript variant X4
100. LRTM2 ENSGALG00000026214 160 0.742 - - - - - - - - 0.742 - leucine rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]

There are 127 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA